| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,370,044 | (T)9→10 | intergenic (+41/‑172) | pspE → / → ycjM | thiosulfate sulfurtransferase PspE/glucosylglycerate phosphorylase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,370,035 | 1 | . | T | 100.0% | 40.8 / NA | 13 | intergenic (+32/‑181) | pspE/ycjM | thiosulfate sulfurtransferase PspE/glucosylglycerate phosphorylase |
| Reads supporting (aligned to +/- strand): ref base . (0/0); new base T (4/9); total (4/9) | |||||||||||
AACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑TTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCT > NC_000913/1369956‑1370108 | aaCGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑t > 1:243689/1‑81 (MQ=255) cGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑ttt < 2:243666/81‑1 (MQ=255) gACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTTTTTTTCTGTCacac < 1:243667/81‑1 (MQ=255) gCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTTTTTTTCTGTCACACCTTAtt > 1:243695/1‑81 (MQ=255) cAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTTTTTTTCTGTCACACCTTAttt < 2:243668/81‑1 (MQ=255) aTTCACCATGAGCGGCGCTTATGCGCCGTTTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGc < 2:243669/81‑1 (MQ=255) aTTCACCATGAGCGGCGCTTATGCGCCGTTTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGc > 2:243687/1‑81 (MQ=255) aCCATGAGCGGCGCTTATGCGCCGTTTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTcac < 1:243670/81‑1 (MQ=255) tGAGCGGCGCTTATGCGCCGTTTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAAt < 1:243671/81‑1 (MQ=255) gcggcgCTTATGCGCCGTTTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACg < 2:243672/81‑1 (MQ=255) gcgcTTATGCGCCGTTTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCtt < 1:243673/81‑1 (MQ=255) gcgcTTATGCGCCGTTTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCtt > 1:243693/1‑81 (MQ=255) cgcTTATGCGCCGTTTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCttt < 2:243674/81‑1 (MQ=255) aTGCGCCGTTTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCCCAAAAATACGCTTTTTccc > 2:243691/1‑81 (MQ=255) tGCGCCGTTTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCt < 2:243675/81‑1 (MQ=255) | AACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑TTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCT > NC_000913/1369956‑1370108 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |