Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	1209603	1209618	16	27 [0]	[0] 18	stfE	e14 prophage; putative side tail fiber protein fragment

GGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGA  >  NC_000913/1209524‑1209678                                                                               |                                                                             ggCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGcc                                                                            <  1:219049‑M2/81‑3 (MQ=255)  gCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGcct                                                                           >  1:219050‑M2/1‑78 (MQ=255)       aTTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGCACCGGGACACCAACAGGTAATGCAGAGccttctcc                                                                      <  1:219051‑M2/81‑9 (MQ=255)       aTTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcc                                                                      <  1:219052‑M2/81‑9 (MQ=255)          gCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctccca                                                                    <  1:219053‑M2/80‑11 (MQ=255)            aTTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaac                                                                 <  2:219054‑M2/81‑14 (MQ=255)                    cagccTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttt                                                         <  1:219055‑M2/81‑22 (MQ=255)                          gTTGGCGGAGTG‑CTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagag                                                  <  2:218827‑M2/81‑29 (MQ=255)                           ttGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgag                                                    >  1:219056‑M2/1‑53 (MQ=255)                               cGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgt                                              >  1:219057‑M2/1‑49 (MQ=255)                                  aGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttg                                           >  1:219058‑M2/1‑46 (MQ=255)                                   gTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttg                                           <  1:218824‑M2/80‑36 (MQ=255)                                   gTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttg                                           <  1:218825‑M2/80‑36 (MQ=255)                                      gCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcaca                                       >  2:219059‑M2/1‑42 (MQ=255)                                         gAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtg                                    <  1:218823‑M2/81‑43 (MQ=255)                                           aGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgcc                                  >  1:219060‑M2/1‑37 (MQ=255)                                                        gggACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgata                     <  1:218822‑M2/81‑58 (MQ=255)                                                        gggACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgata                     <  1:218821‑M2/81‑58 (MQ=255)                                                         ggACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatat                    <  1:218820‑M2/81‑59 (MQ=255)                                                          gACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatc                   <  2:218819‑M2/81‑60 (MQ=255)                                                            cacCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgc                 >  1:219061‑M2/1‑20 (MQ=255)                                                              ccAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgcca               >  1:219062‑M2/1‑18 (MQ=255)                                                              ccAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgcttgcacagtgccatccgatttgatatcgcc                <  2:218818‑M2/80‑63 (MQ=255)                                                                  cAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacg           <  1:218817‑M2/81‑68 (MQ=255)                                                                  cAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacg           <  1:218816‑M2/81‑68 (MQ=255)                                                                           cAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgc  >  1:219063‑M2/1‑5 (MQ=255)                                                                           cAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgc  >  1:219064‑M2/1‑5 (MQ=255)                                                                               |                                                                             GGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGA  >  NC_000913/1209524‑1209678

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑