Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	3455428	3455515	88	5 [4]	[4] 5	gspA/gspC	Type II secretion system protein GspA/Type II secretion system protein GspC

TTTGACGTTTCTCACACAACCAGGAAAGAATAACTTCTCTTCTCGTAGACATAGAACTTCCTGTTTTAATTATTGATTATCCTTAATCATAA  >  NC_000913/3455347‑3455438                                                                                 |            tttGACGTTTCTCACACAACCAGGAAAGAATAACTTCTCTTCTCGTAGACATAGAACTTCCTGTTTTAATTATTGATTATc             <  2:610377/81‑1 (MQ=255)           ctcACACAACCAGGAAAGAATAACTTCTCTTCTCGTAGACATAGAACTTCCTGTTTTAATTATTGATTATCCTTAATCAt    <  1:610378/80‑1 (MQ=255)              acacaACCAGGAAAGAATAACTTCTCTTCTCGTAGACATAGAACTTCCTGTTTTAATTATTGATTATCCTTAATCATaa  <  1:610380/79‑1 (MQ=255)              acacaACCAGGAAAGAATAACTTCTCTTCTCGTAGACATAGAACTTCCTGTTTTAATTATTGATTATCCTTAATCATaa  <  2:610381/79‑1 (MQ=255)              acacaACCAGGAAAGAATAACTTCTCTTCTCGTAGACATAGAACTTCCTGTTTTAATTATTGATTATCCTTAATCATa   <  1:610379/78‑1 (MQ=255)                                                                                 |            TTTGACGTTTCTCACACAACCAGGAAAGAATAACTTCTCTTCTCGTAGACATAGAACTTCCTGTTTTAATTATTGATTATCCTTAATCATAA  >  NC_000913/3455347‑3455438

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑