| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 937,762 | G→A | G131S (GGC→AGC) | lolA → | outer membrane lipoprotein carrier protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 937,762 | 0 | G | A | 100.0% | 60.5 / NA | 18 | G131S (GGC→AGC) | lolA | outer membrane lipoprotein carrier protein |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (9/9); total (9/9) | |||||||||||
GTAATACGCCGTTTATGCTGATTGCCCGCAACCAGTCCAGCGACTGGCAGCAGTACAATATCAAACAGAATGGCGATGACTTTGTCCTGACGCCGAAAGCCAGCAATGGCAATCTGAAGCAGTTCACCATTAACGTGGGACGTGATGGC > NC_000913/937691‑937839 | gTAATACGCCGTTTATGCTGATTGCCCGCAACCAGTCCAGCGACTGGCAGCAGTACAATATCAAACAGAATAGCGATGACt > 2:173933/1‑81 (MQ=255) aCGCCGTTTATGCTGATTGCCCGCAACCAGTCCAGCGACTGGCAGCAGTACAATATCAAACAGAATAGCGATGACTTTGTc > 1:173926/1‑81 (MQ=255) aCGCCGTTTATGCTGATTGCCCGCAACCAGTCCAGCGACTGGCAGCAGTACAATATCAAACAGAATAGCGATGACTTTGTc > 1:173936/1‑81 (MQ=255) cGCCGTTTATGCTGATTGCCCGCAACCAGTCCAGCGACTGGCAGCAGTACAATATCAAACAGAATAGCGATGACTTTGTcc > 2:173945/1‑81 (MQ=255) ccGTTTATGCTGATTGCCCGCAACCAGTCCAGCGACTGGCAGCAGTACAATATCAAACAGAATAGCGATGACTTTGTCCTg < 1:173908/81‑1 (MQ=255) gCTGATTGCCCGCAACCAGTCCAGCGACTGGCAGCAGTACAATATCAAACAGAATAGCGATGACTTTGTCCTGACGCCGa > 2:173948/1‑80 (MQ=255) gCCCGCAACCAGTCCAGCGACTGGCAGCAGTACAATATCAAACAGAATAGCGATGACTTTGTCCTGACGCCGAAAGCCAg > 1:173947/1‑80 (MQ=255) cccGCAACCAGTCCAGCGACTGGCAGCAGTACAATATCAAACAGAATAGCGATGACTTTGTCCTGACGCCGAAAGCCAGc < 1:173910/80‑1 (MQ=255) cccGCAACCAGTCCAGCGACTGGCAGCAGTACAATATCAAACAGAATAGCGATGACTTTGTCCTGACGCCGAAAGCCAGCa < 1:173911/81‑1 (MQ=255) cAGTCCAGCGACTGGCAGCAGTACAATATCAAACAGAATAGCGATGACTTTGTCCTGACGCCGAAAGCCAGCAATGGCAAt < 1:173912/81‑1 (MQ=255) tCCAGCGACTGGCAGCAGTACAATATCAAACAGAATAGCGATGACTTTGTCCTGACGCCGAAAGCCAGCAATGGCAATCTg < 2:173913/81‑1 (MQ=255) aGCGACTGGCAGCAGTACAATATCAAACAGAATAGCGATGACTTTGTCCTGACGCCGAAAGCCAGCAATGGCAATCTGAAg > 1:173943/1‑81 (MQ=255) cGACTGGCAGCAGTACAATATCAAACAGAATAGCGATGACTTTGTCCTGACGCCGAAAGCCAGCAATGGCAATCTGAAg > 2:173942/1‑79 (MQ=255) cagcagTACAATATCAAACAGAATAGCGATGACTTTGTCCTGACGCCGAAAGCCAGCAATGGCAATCTGAAGCAGTTCAcc < 2:173914/81‑1 (MQ=255) agcagTACAATATCAAACAGAATAGCGATGACTTTGTCCTGACGCCGAAAGCCAGCAATGGCAATCTGAAGCAGTTCACCa > 1:173954/1‑81 (MQ=255) tatCAAACAGAATAGCGATGACTTTGTCCTGACGCCGAAAGCCAGCAATGGCAATCTGAAGCAGTTCACCATTAACGTggg < 2:173915/81‑1 (MQ=255) cAGAATAGCGATGACTTTGTCCTGACGCCGAAAGCCAGCAATGGCAATCTGAAGCAGTTCACCATTAACGTGGGACGTGAt < 1:173916/81‑1 (MQ=255) aaTAGCGATGACTTTGTCCTGACGCCGAAAGCCAGCAATGGCAATCTGAAGCAGTTCACCATTAACGTGGGACGTGATGGc < 2:173917/81‑1 (MQ=255) | GTAATACGCCGTTTATGCTGATTGCCCGCAACCAGTCCAGCGACTGGCAGCAGTACAATATCAAACAGAATGGCGATGACTTTGTCCTGACGCCGAAAGCCAGCAATGGCAATCTGAAGCAGTTCACCATTAACGTGGGACGTGATGGC > NC_000913/937691‑937839 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |