Predicted mutation | ||||||
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evidence | seq id | position | mutation | annotation | gene | description |
RA | NC_000913 | 1,108,393 | A→T | F183L (TTT→TTA) | opgC ← | protein required for succinyl modification of osmoregulated periplasmic glucans |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 1,108,393 | 0 | A | T | 100.0% | 28.2 / NA | 10 | F183L (TTT→TTA) | opgC | protein required for succinyl modification of osmoregulated periplasmic glucans |
Reads supporting (aligned to +/- strand): ref base A (0/0); new base T (4/6); total (4/6) |
GAATGGGCGGATACACAATAAAAATCGTTCTTCTTATTACCGCATAACCGATGCCGAGGCATAAAAAAATCACCGATAGTTTTACCATCGAGAATTTTTTATTCGTTTTATCAGAATTTTCTAAATTATTTCTGATGCGCT > NC_000913/1108329‑1108469 | gAATGGGCGGATACACAATAAAAATCGTTCTTCTTATTACCGCATAACCGATGCCGAGGCATAATAAAATCACCGATAGtt < 1:202306/81‑1 (MQ=255) gAATGGGCGGATACACAATAAAAATCGTTCTTCTTATTACCGCATAACCGATGCCGAGGCATAATAAAATCACCGATAGtt < 2:202307/81‑1 (MQ=255) aTACACAATAAAAATCGTTCTTCTTATTACCGCATAACCGATGCCGAGGCATAATAAAATCACCGATAGTTTTACCATCga < 1:202308/81‑1 (MQ=255) tACACAATAAAAATCGTTCTTCTTATTACCGCATAACCGATGCCGAGGCATAATAAAATCACCGATAGTTTTACCATc > 1:202319/1‑78 (MQ=255) tAAAAATCGTTCTTCTTATTACCGCATAACCGATGCCGAGGCATAATAAAATCACCGATAGTTTTACCATCGAGAAttttt < 2:202309/81‑1 (MQ=255) taCCGCATAACCGATGCCGAGGCATAATAAAATCACCGATAGTTTTACAATCGAGAATTTTTTATTCGTTTTATCAGAAtt > 2:202318/1‑81 (MQ=255) gCATAACCGATGCCGAGGCATAATAAAATCACCGATAGTTTTACCATCGAGAATTTTTTATTCGTTTTATCAGAATTTTCt < 2:202310/81‑1 (MQ=255) aaCCGATGCCGAGGCATAATAAAATCACCGATAGTTTTACCATCGAGAATTTTTTATTCGTTTTATCAGAATTTTCTAAat > 2:202324/1‑81 (MQ=255) ccGAGGCATAATAAAATCACCGATAGTTTTACCATCGAGAATTTTTTATTCGTTTTATCAGAATTTTCTAAATTATTTCt < 1:202311/80‑1 (MQ=255) cGAGGCATAATAAAATCACCGATAGTTTTACCATCGAGAATTTTTTATTCGTTTTATCAGAATTTTCTAAATTATTTCTGa > 2:202322/1‑81 (MQ=255) ataataAAATCACCGATAGTTTTACCATCGAGAATTTTTTATTCGTTTTATCAGAATTTTCTAAATTATTTCTGATGCGCt > 1:202320/1‑81 (MQ=255) | GAATGGGCGGATACACAATAAAAATCGTTCTTCTTATTACCGCATAACCGATGCCGAGGCATAAAAAAATCACCGATAGTTTTACCATCGAGAATTTTTTATTCGTTTTATCAGAATTTTCTAAATTATTTCTGATGCGCT > NC_000913/1108329‑1108469 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |