| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,177,722 | G→A | G135S (GGC→AGC) | lolE → | lipoprotein release complex ‑ inner membrane subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,177,722 | 0 | G | A | 100.0% | 74.1 / NA | 22 | G135S (GGC→AGC) | lolE | lipoprotein release complex ‑ inner membrane subunit |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (11/11); total (11/11) | |||||||||||
AATCTTCGCGCAATCCAGGTGAAGGGCGTTAACCCGCAACAGGAACAGCGTCTGAGCGCATTACCCTCGTTTGTCCAGGGCGATGCGTGGCGCAATTTTAAAGCGGGCGAACAGCAAATTATCATCGGCAAAGGCGTGGCGGATGCGCTGAAAGT > NC_000913/1177644‑1177798 | aaTCTTCGCGCAATCCAGGTGAAGGGCGTTAACCCGCAACAGGAACAGCGTCTGAGCGCATTACCCTCGTTTGTCCAGAGc < 1:214216/81‑1 (MQ=255) cgcgCAATCCAGGTGAAGGGCGTTAACCCGCAACAGGAACAGCGTCTGAGCGCATTACCCTCGTTTGTCCAGAGCGAt < 2:214218/78‑1 (MQ=255) cgcgCAATCCAGGTGAAGGGCGTTAACCCGCAACAGGAACAGCGTCTGAGCGCATTACCCTCGTTTGTCCAGAGCGATg < 1:214217/79‑1 (MQ=255) cAGGTGAAGGGCGTTAACCCGCAACAGGAACAGCGTCTGAGCGCATTACCCTCGTTTGTCCAGAGCGATGCGTGGCGCAAt < 2:214219/81‑1 (MQ=255) gTGAAGGGCGTTAACCCGCAACAGGAACAGCGTCTGAGCGCATTACCCTCGTTTGTCCAGAGCGATGCGTGGCGCAAtttt < 2:214220/81‑1 (MQ=255) gTGAAGGGCGTTAACCCGCAACAGGAACAGCGTCTGAGCGCATTACCCTCGTTTGTCCAGAGCGATGCGTGGCGCAAttt > 2:214251/1‑80 (MQ=255) ggCGTTAACCCGCAACAGGAACAGCGTCTGAGCGCATTACCCTCGTTTGTCCAGAGCGATGCGTGGCGCAATTTTAAAGCg > 1:214249/1‑81 (MQ=255) gTTAACCCGCAACAGGAACAGCGTCTGAGCGCATTACCCTCGTTTGTCCAGAGCGATGCGTGGCGCAATTTTAAAGCGGGc > 2:214252/1‑81 (MQ=255) aaCCCGCAACAGGAACAGCGTCTGAGCGCATTACCCTCGTTTGTCCAGAGCGATGCGTGGCGCAATTTTAAAGCGGGCGaa > 1:214250/1‑81 (MQ=255) aCCCGCAACAGGAACAGCGTCTGAGCGCATTACCCTCGTTTGTCCAGAGCGATGCGTGGCGCAATTTTAAAGCGGGCGaa > 1:214253/1‑80 (MQ=255) cAACAGGAACAGCGTCTGAGCGCATTACCCTCGTTTGTCCAGAGCGATGCGTGGCGCAATTTTAAAGCGGGCGAACAGCaa < 2:214221/81‑1 (MQ=255) cAACAGGAACAGCGTCTGAGCGCATTACCCTCGTTTGTCCAGAGCGATGCGTGGCGCAATTTTAAAGCGGGCGAACAGCa > 2:214261/1‑80 (MQ=255) aaCAGGAACAGCGTCTGAGCGCATTACCCTCGTTTGTCCAGAGCGATGCGTGGCGCAATTTTAAAGCGGGCGAACAGCaaa < 1:214222/81‑1 (MQ=255) cAGGAACAGCGTCTGAGCGCATTACCCTCGTTTGTCCAGAGCGATGCGTGGCGCAATTTTAAAGCGGGCGAACAGCAAAtt < 1:214223/81‑1 (MQ=255) gAGCGCATTACCCTCGTTTGTCCAGAGCGATGCGTGGCGCAATTTTAAAGCGGGCGAACAGCAAATTATCATCGGCAAAgg > 1:214274/1‑81 (MQ=255) aGCGCATTACCCTCGTTTGTCCAGAGCGATGCGTGGCGCAATTTTAAAGCGGGCGAACAGCAAATTATCATCGGCAAAGGc < 1:214224/81‑1 (MQ=255) cgcATTACCCTCGTTTGTCCAGAGCGATGCGTGGCGCAATTTTAAAGCGGGCGAACAGCAAATTATCATCGGCAAAGGCGt > 1:214255/1‑81 (MQ=255) aCCCTCGTTTGTCCAGAGCGATGCGTGGCGCAATTTTAAAGCGGGCGAACAGCAAATTATCATCGGCAAAGGCGTGGCgg < 2:214225/80‑1 (MQ=255) cGTTTGTCCAGAGCGATGCGTGGCGCAATTTTAAAGCGGGCGAACAGCAAATTATCATCGGCAAAGGCGTGGCGGATgcgc > 2:214256/1‑81 (MQ=255) cGTTTGTCCAGAGCGATGCGTGGCGCAATTTTAAAGCGGGCGAACAGCAAATTATCATCGGCAAAGGCGTGGCGGATgcgc > 2:214268/1‑81 (MQ=255) tGTCCAGAGCGATGCGTGGCGCAATTTTAAAGCGGGCGAACAGCAAATTATCATCGGCAAAGGCGTGGCGGATGCGATGa > 2:214259/1‑80 (MQ=255) cAGAGCGATGCGTGGCGCAATTTTAAAGCGGGCGAACAGCAAATTATCATCGGCAAAGGCGTGGCGGATGCGCTGAAAGt < 2:214226/80‑1 (MQ=255) | AATCTTCGCGCAATCCAGGTGAAGGGCGTTAACCCGCAACAGGAACAGCGTCTGAGCGCATTACCCTCGTTTGTCCAGGGCGATGCGTGGCGCAATTTTAAAGCGGGCGAACAGCAAATTATCATCGGCAAAGGCGTGGCGGATGCGCTGAAAGT > NC_000913/1177644‑1177798 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |