| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,212,664 | T→C | intergenic (‑14/+39) | ymgL ← / ← ycgX | protein YmgL/uncharacterized protein YcgX |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,212,664 | 0 | T | C | 100.0% | 38.8 / NA | 12 | intergenic (‑14/+39) | ymgL/ycgX | protein YmgL/uncharacterized protein YcgX |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (4/8); total (4/8) | |||||||||||
TGGGTGACAATAAAAAGACAGTATTAATCATCCATAGAGATAGTCTCTGCACTTTTATTTCCATTATGCTAATGCCTTACTGAATTATGAAGCATTTCTTAAGTATCCAACTTTAGCTAGATTAATGGTTTATTATTTTCTACAT > NC_000913/1212587‑1212731 | tGGGTGACAATAAAAAGACAGTATTAATCATCCATAGAGATAGTCTCTGCACTTTTATTTCCATTATGCTAATGCCTCAc < 2:219316/80‑1 (MQ=255) gTGACAATAAAAAGACAGTATTAATCATCCATAGAGATAGTCTCTGCACCTTTATTTCCATTATGCTAATGCCTCACTGaa > 2:219334/1‑81 (MQ=255) tGACAATAAAAAGACAGTATTAATCATCCATAGAGATAGTCTCTGCACTTTTATTTCCATTATGCTAATGCCTCACTGAAt < 1:219317/81‑1 (MQ=255) aaGACAGTATTAATCATCCATAGAGATAGTCTCTGCACTTTTATTTCCATTATGCTAATGCCTCACTGAATTATGAAGCAt < 2:219318/81‑1 (MQ=255) gACAGTATTAATCATCCATAGAGATAGTCTCTGCACTTTTATTTCCATTATGCTAATGCCTCACTGAATTATGAAGCAttt < 2:219319/81‑1 (MQ=255) aaTCATCCATAGAGATAGTCTCTGCACTTTTATTTCCATTATGCTAATGCCTCACTGAATTATGAAGCATTTCTTAAGTAt > 2:219330/1‑81 (MQ=255) catcCATAGAGATAGTCTCTGCACTTTTATTTCCATTATGCTAATGCCTCACTGAATTATGAAGCATTTCTTAAGTATcc > 2:219332/1‑80 (MQ=255) aTAGAGATAGTCTCTGCACTTTTATTTCCATTATGCTAATGCCTCACTGAATTATGAAGCATTTCTTAAGTATCCAACttt < 2:219320/81‑1 (MQ=255) aTAGTCTCTGCACTTTTATTTCCATTATGCTAATGCCTCACTGAATTATGAAGCATTTCTTAAGTATCCAACTTTAGCTAg < 1:219321/81‑1 (MQ=255) aTAGTCTCTGCACTTTTATTTCCATTATGCTAATGCCTCACTGAATTATGAAGCATTTCTTAAGTATCCAACTTTAGCTAg < 1:219322/81‑1 (MQ=255) gTCTCTGCACTTTTATTTCCATTATGCTAATGCCTCACTGAATTATGAAGCATTTCTTAAGTATCCAACTTTAGCTAGAt < 1:219323/80‑1 (MQ=255) tATGCTAATGCCTCACTGAATTATGAAGCATTTCTTAAGTATCCAACTTTAGCTAGATTAATGGTTTATTATTTTCTACAt > 1:219333/1‑81 (MQ=255) | TGGGTGACAATAAAAAGACAGTATTAATCATCCATAGAGATAGTCTCTGCACTTTTATTTCCATTATGCTAATGCCTTACTGAATTATGAAGCATTTCTTAAGTATCCAACTTTAGCTAGATTAATGGTTTATTATTTTCTACAT > NC_000913/1212587‑1212731 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |