| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,441,735 | T→C | K3K (AAA→AAG) | hslJ ← | lipoprotein implicated in Novobiocin resistance |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,441,735 | 0 | T | C | 100.0% | 55.5 / NA | 17 | K3K (AAA→AAG) | hslJ | lipoprotein implicated in Novobiocin resistance |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (11/6); total (11/6) | |||||||||||
CTGTTCTGGCGTAACAGCAATTTTGTCATTACTTACACATCCCGCCATCAGCAGGCTTAGCGCAACAAACGCGGCTACTTTCTTCATTGTGGTTCTCAATTACAGTTTCTGACTCAGGACTATTTTAAGAATAGAGGATGAAAGGTCATT > NC_000913/1441657‑1441806 | cTGTTCTGGCGTAACAGCAGTTTTGTCATTACTTACACATCCCGCCATCAGCAGGCTTAGCGCAACAAACGCGGCTACctt < 2:254866/81‑1 (MQ=255) cTGGCGTAACAGCAATTTTGTCATTACTTACACATCCCGCCATCAGCAGGCTTAGCGCAACAAACGCGGCTACCttcttc < 2:254867/80‑1 (MQ=255) aCAGCAATTTTGTCATTACTTACACATCCCGCCATCAGCAGGCTTAGCGCAACAAACGCGGCTACCTTCTTCATTGTGGtt > 2:254889/1‑81 (MQ=255) cAGCAATTTTGTCATTACTTACACATCCCGCCATCAGCAGGCTTAGCGCAACAAACGCGGCTACCTTCTTCATTGTGGTtc < 1:254868/81‑1 (MQ=255) gCAATTTTGTCATTACTTACACATCCCGCCATCAGCAGGCTTAGCGCAACAAACGCGGCTACCTTCTTCATTGTGGTtct > 1:254898/1‑80 (MQ=255) ttttGTCATTACTTACACATCCCGCCATCAGCAGGCTTAGCGCAACAAACGCGGCTACCTTCTTCATTGTGGTTCTCAAt > 1:254891/1‑80 (MQ=255) gTCATTACTTACACATCCCGCCATCAGCAGGCTTAGCGCAACAAACGCGGCTACCTTCTTCATTGTGGTTCTCAATTACAg > 1:254899/1‑81 (MQ=255) aTTACTTACACATCCCGCCATCAGCAGGCTTAGCGCAACAAACGCGGCTACCTTCTTCATTGTGGTTCTCAATTACAGtt < 2:254869/80‑1 (MQ=255) ttacACATCCCGCCATCAGCAGGCTTAGCGCAACAAACGCGGCTACCTTCTTCATTGTGGTTCTCAATTACAGTTTCTGAc > 2:254885/1‑81 (MQ=255) tacACATCCCGCCATCAGCAGGCTTAGCGCAACAAACGCGGCTACCTTCTTCATTGTTGTTCTCAATTACAGTTTCTGACt > 2:254896/1‑81 (MQ=255) acacATCCCGCCATCAGCAGGCTTAGCGCGACAAACGCGGCTACCTTCTTCATTGTGGTTCTCAATTACAGTTTCTGAc < 1:254870/79‑1 (MQ=255) caTCCCGCCATCAGCAGGCTTAGCGCAACAAACGCGGCTACCTTCTTCATTGTGGTTCTCAATTACAGTTTCTGACTCAg > 1:254890/1‑80 (MQ=255) ccGCCATCAGCAGGCTTAGCGCAACAAACGCGGCTACCTTCTTCATTGTGGTTCTCAATTACAGTTTCTGACTCAGGACt < 1:254871/80‑1 (MQ=255) cagGCTTAGCGCAACAAACGCGGCTACCTTCTTCATTGTGGTTCTCAATTACAGTTTCTGACTCAGGACTATTTTAAGaa > 1:254892/1‑80 (MQ=255) tAGCGCAACAAACGCGGCTACCTTCTTCATTGTGGTTCTCAATTACAGTTTCTGACTCAGGACTATTTTAAGAATAGAGGa > 2:254893/1‑81 (MQ=255) aacaaACGCGGCTACCTTCTTCATTGTGGTTCTCAATTACAGTTTCTGACTCAGGACTATTTTAAGAATAGAGGATGAAAg > 2:254902/1‑81 (MQ=255) aCGCGGCTACCTTCTTCATTGTGGTTCTCAATTACAGTTTCTGACTCAGGACTATTTTAAGAATAGAGGATGAAAGGTCAt > 2:254906/1‑81 (MQ=255) cgcgGCTACCTTCTTCATTGTGGTTCTCAATTACAGTTTCTGACTCAGGACTATTTTAAGAATAGAGGATGAAAGGTCAtt < 2:254872/81‑1 (MQ=255) | CTGTTCTGGCGTAACAGCAATTTTGTCATTACTTACACATCCCGCCATCAGCAGGCTTAGCGCAACAAACGCGGCTACTTTCTTCATTGTGGTTCTCAATTACAGTTTCTGACTCAGGACTATTTTAAGAATAGAGGATGAAAGGTCATT > NC_000913/1441657‑1441806 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |