| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 251,954 | T→C | intergenic (+1/‑51) | dinB → / → yafN | DNA polymerase IV/antitoxin YafN |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 251,954 | 0 | T | C | 100.0% | 57.3 / NA | 17 | intergenic (+1/‑51) | dinB/yafN | DNA polymerase IV/antitoxin YafN |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (7/10); total (7/10) | |||||||||||
TGTGCGTCTGGTGGGGCTGCATGTGACGTTGCTTGACCCGCAAATGGAAAGACAACTGGTGCTGGGATTATGATGTATACTATTATGTATATTCTGGTGTGCATTATTATGAGGGTATCACTGTATGCATCGAATTCTCGCTGAAAAATC > NC_000913/251881‑252030 | tgtgCGTCTGGTGGGGCTGCATGTGACGTTGCTTGACCCGCAAATGGAAAGACAACTGGTGCTGGGATTATGACGTATACt < 1:49677/81‑1 (MQ=255) tgCGTCTGGTGGGGCTGCATGTGACGTTGCTTGACCCGCAAATGGAAAGACAACTGGTGCTGGGATTATGACGTATACtat > 1:49705/1‑81 (MQ=255) tCTGGTGGGGCTGCATGTGACGTTGCTTGACCCGCAAATGGAAAGACAACTGGTGCTGGGATTATGACGTATACTATTATg < 2:49678/81‑1 (MQ=255) gggCTGCATGTGACGTTGCTTGACCCGCAAATGGAAAGACAACTGGTGCTGGGATTATGACGTATACTATTATGTATATTc < 1:49679/81‑1 (MQ=255) aCGTTGCTTGACCCGCAAATGGAAAGACAACTGGTGCTGGGATTATGACGTATACTATTATGTATATTCTGGTGTGCatta > 2:49704/1‑81 (MQ=255) aCGTTGCTTGACCCGCAAATGGAAAGACAACTGGTGCTGGGATTATGACGTATACTATTATGTATATTCTGGTGTGCatta > 2:49701/1‑81 (MQ=255) cGTTGCTTGACCCGCAAATGGAAAGACAACTGGTGCTGGGATTATGACGTATACTATTATGTATATTCTGGTGTGCattat < 1:49680/81‑1 (MQ=255) cGTTGCTTGACCCGCAAATGGAAAGACAACTGGTGCTGGGATTATGACGTATACTATTATGTATATTCTGGTGTGCattat < 1:49681/81‑1 (MQ=255) cTTGACCCGCAAATGGAAAGACAACTGGTGCTGGGATTATGACGTATACTATTATGTATATTCTGGTGTGCATtattat > 1:49706/1‑79 (MQ=255) aCCCGCAAATGGAAAGACAACTGGTGCTGGGATTATGACGTATACTATTATGTATATTCTGGTGTGCATTATTATGAggg < 2:49682/80‑1 (MQ=255) aaaTGGAAAGACAACTGGTGCTGGGATTATGACGTATACTATTATGTATATTCTGGTGTGCATTATTATGAGGGTATCACt > 2:49709/1‑81 (MQ=255) tGGAAAGACAACTGGTGCTGGGATTATGACGTATACTATTATGTATATTCTGGTGTGCATTATTATGAGGGTATCACTGTa < 1:49683/81‑1 (MQ=255) ggAAAGACAACTGGTGCTGGGATTATGACGTATACTATTATGTATATTCTGGTGTGCATTATTATGAGGGTATCACTGTAt > 2:49715/1‑81 (MQ=255) gAAAGACAACTGGTGCTGGGATTATGACGTATACTATTATGTATATTCTGGTGTGCATTATTATGAGGGTATCACTGTAt < 2:49684/80‑1 (MQ=255) gAAAGACAACTGGTGCTGGGATTATGACGTATACTATTATGTATATTCTGGTGTGCATTATTATGAGGGTATCACTGTATg < 1:49685/81‑1 (MQ=255) tGCTGGGATTATGACGTATACTATTATGTATATTCTGGTGTGCATTATTATGAGGGTATCACTGTATGCATCGAATTCTCg < 2:49686/81‑1 (MQ=255) aTTATGACGTATACTATTATGTATATTCTGGTGTGCATTATTATGAGGGTATCACTGTATGCATCGAATTCTCGCTGaaa > 1:49708/1‑80 (MQ=255) atgacgTATACTATTATGTATATTCTGGTGTGCATTATTATGAGGGTATCACTGTATGCATCGAATTCTCGCTGAAAAAt < 1:49687/80‑1 (MQ=255) tgacgTATACTATTATGTATATTCTGGTGTGCATTATTATGAGGGTATCACTGTATGCATCGAATTCTCGCTGAAAAATc < 1:49688/80‑1 (MQ=255) | TGTGCGTCTGGTGGGGCTGCATGTGACGTTGCTTGACCCGCAAATGGAAAGACAACTGGTGCTGGGATTATGATGTATACTATTATGTATATTCTGGTGTGCATTATTATGAGGGTATCACTGTATGCATCGAATTCTCGCTGAAAAATC > NC_000913/251881‑252030 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |