| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,313,055 | A→G | intergenic (‑306/‑29) | ompC ← / → micF | outer membrane porin C/small regulatory RNA MicF |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,313,055 | 0 | A | G | 100.0% | 42.6 / NA | 13 | intergenic (‑306/‑29) | ompC/micF | outer membrane porin C/small regulatory RNA MicF |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (8/5); total (8/5) | |||||||||||
AATAATAATTCAAGGTTAAAATCAATAACTTATTCTTAAGTATTTGACAGCACTGAATGTCAAAACAAAACCTTCACTCGCAACTAGAATAACTCCCGCTATCATCATTAACTTTATTTATTACCGTCATTCATTTCTGAATGTC > NC_000913/2312987‑2313131 | aataataatTCAAGGTTAAAATCAATAACTTATTCTTAAGTATTTGACAGCACTGAATGTCAAAACAAGACCTTCACTCGc < 2:393939/81‑1 (MQ=255) aataatTCAAGGTTAAAATCAATAACTTATTCTTAAGTATTTGACAGCACTGAATGTCAAAACAAGACCTTCACTCGCAAc > 1:393957/1‑81 (MQ=255) aataatTCAAGGTTAAAATCAATAACTTATTCTTAAGTATTTGACAGCACTGAATGTCAAAACAAGACCTTCACTCGCAAc > 1:393965/1‑81 (MQ=255) cAAGGTTAAAATCAATAACTTATTCTTAAGTATTTGACAGCACTGAATGTCAAAACAAGACCTTCACTCGCAACTAGAAt > 2:393955/1‑80 (MQ=255) cAAGGTTAAAATCAATAACTTATTCTTAAGTATTTGACAGCACTGAATGTCAAAACAAGACCTTCACTCGCAACTAGAAt > 2:393960/1‑80 (MQ=255) aaGGTTAAAATCAATAACTTATTCTTAAGTATTTGACAGCACTGAATGTCAAAACAAGACCTTCACTCGCAACTAGAATa < 1:393940/80‑1 (MQ=255) aaGGTTAAAATCAATAACTTATTCTTAAGTAATTGACAGCACTGAATGTCAAAACAAGACCTTCACTCGCAACTAGAATaa < 2:393941/81‑1 (MQ=255) gTTAAAATCAATAACTTATTCTTAAGTATTTGACAGCACTGAATGTCAAAACAAGACCTTCACTCGCAACTAGAATAACTc > 1:393958/1‑81 (MQ=255) ttAAAATCAATAACTTATTCTTAAGTATTTGACAGCACTGAATGTCAAAACAAGACCTTCACTCGCAACTAGAATAACTcc > 1:393959/1‑81 (MQ=255) aaTCAATAACTTATTCTTAAGTATTTGACAGCACTGAATGTCAAAACAAGACCTTCACTCGCAACTAGAATAACTCCCGc > 1:393962/1‑80 (MQ=255) aaTAACTTATTCTTAAGTATTTGACAGCACTGAATGTCAAAACAAGACCTTCACTCGCAACTAGAATAACTCCCGCTatca > 2:393956/1‑81 (MQ=255) aTAACTTATTCTTAAGTATTTGACAGCACTGAATGTCAAAACAAGACCTTCACTCGCAACTAGAATAACTCCCGCTatcat < 2:393942/81‑1 (MQ=255) aaGTATTTGACAGCACTGAATGTCAAAACAAGACCTTCACTCGCAACTAGAATAACTCCCGCTATCATCATTAACttt < 1:393943/78‑1 (MQ=255) aaacaagacCTTCACTCGCAACTAGAATAACTCCCGCTATCATCATTAACTTTATTTATTACCGTCATTCATTTCTGAATg < 1:393944/81‑1 (MQ=255) acaagacCTTCACTCGCAACTAGAATAACTCCCGCTATCATCATTAACTTTATTTATTACCGTCATTCATTTCTGAATGTc > 2:393961/1‑81 (MQ=255) | AATAATAATTCAAGGTTAAAATCAATAACTTATTCTTAAGTATTTGACAGCACTGAATGTCAAAACAAAACCTTCACTCGCAACTAGAATAACTCCCGCTATCATCATTAACTTTATTTATTACCGTCATTCATTTCTGAATGTC > NC_000913/2312987‑2313131 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |