| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,522,542 | C→T | intergenic (‑65/+187) | xapR ← / ← xapB | DNA‑binding transcriptional activator XapR/xanthosine:H(+) symporter XapB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,522,542 | 0 | C | T | 100.0% | 15.5 / NA | 6 | intergenic (‑65/+187) | xapR/xapB | DNA‑binding transcriptional activator XapR/xanthosine:H(+) symporter XapB |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (5/1); total (5/1) | |||||||||||
TTAAGTGCTCCATATAATAAATACATCGTATTAAATTATCATGGCATAAAGTATTTCACCACCAGATATCCGACATACATAAACACAATGGATAATATACCCGGTAATACATTTGGTACAGGAATAGGCAAGC > NC_000913/2522480‑2522612 | ttAAGTGCTCCATATAATAAATACATCGTATTAAATTATCATGGCATAAAGTATTTCACCACTAGATATCCGAcatacata < 2:429634/81‑1 (MQ=255) taaataCATCGTATTAAATTATCATGGCATAAAGTATTTCACCACTAGATATCCGACATACATAAACACAATGGataata > 1:429642/1‑80 (MQ=255) cATCGTATTAAATTATCATGGCATAAAGTATTTCACCACTAGATATCCGACATACATAAACACAATGGATAATATACCCgg > 1:429654/1‑81 (MQ=255) tATCATGGCATAAAGTATTTCACCACTAGATATCCGACATACATAAACACAATGGATAATATACCCGGTAATACATTTgg > 1:429658/1‑80 (MQ=255) gTATTTCACCACTAGATATCCGACATACATAAACACAATGGATAATATACCCGGTAATACATTTGGTACAGGAATAGGc > 1:429656/1‑79 (MQ=255) aTTTCACCACTAGATATCCGACATACATAAACACAATGGATAATATACCCGGTAATACATTTGGTACAGGAATAGGCAAgc > 1:429648/1‑81 (MQ=255) | TTAAGTGCTCCATATAATAAATACATCGTATTAAATTATCATGGCATAAAGTATTTCACCACCAGATATCCGACATACATAAACACAATGGATAATATACCCGGTAATACATTTGGTACAGGAATAGGCAAGC > NC_000913/2522480‑2522612 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |