| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,987,399 | T→A | intergenic (+323/‑137) | yqeG → / → yqeH | putative transporter YqeG/putative LuxR family transcriptional regulator YqeH |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,987,399 | 0 | T | A | 100.0% | 15.0 / NA | 6 | intergenic (+323/‑137) | yqeG/yqeH | putative transporter YqeG/putative LuxR family transcriptional regulator YqeH |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base A (5/1); total (5/1) | |||||||||||
CAACCATGCAAGATTAAATCAGTGAAACATAATCATATTTGATAACGAGAAATGCATTTTTAAATGCCTTACTCAGAATTATAGCAAATACAGATTAATCGCAATTTTTCCCGGCAAAATTACAAAATCATGGTG > NC_000913/2987339‑2987473 | cAACCATGCAAGATTAAATCAGTGAAACATAATCATATTTGATAACGAGAAATGCATTTTAAAATGCCTTACTCAGAATta > 1:517570/1‑81 (MQ=255)cAACCATGCAAGATTAAATCAGTGAAACATAATCATATTTGATAACGAGAAATGCATTTTAAAATGCCTTACTCAGAATta > 2:517565/1‑81 (MQ=255) aaCCATGCAAGATTAAATCAGTGAAACATAATCATATTTGATAACGAGAAATGCATTTTAAAATGCCTTACTCAGAATta < 2:517552/80‑1 (MQ=255) aTAATCATATTTGATAACGAGAAATGCATTTTAAAATGCCTTACTCAGAATTATAGCAAATACAGATTAATCGCAAttttt > 1:517571/1‑81 (MQ=255) gaAATGCATTTTAAAATGCCTTACTCAGAATTATAGCAAATACAGATTAATCGCAATTTTTCCCGGCAAAATTACAAAAt > 2:765938/1‑80 (MQ=255) aTTTTAAAATGCCTTACTCAGAATTATAGCAAATACAGATTAATCGCAATTTTTCCCGGCAAAATTACAAAATCATGgtg > 1:517575/1‑80 (MQ=255) | CAACCATGCAAGATTAAATCAGTGAAACATAATCATATTTGATAACGAGAAATGCATTTTTAAATGCCTTACTCAGAATTATAGCAAATACAGATTAATCGCAATTTTTCCCGGCAAAATTACAAAATCATGGTG > NC_000913/2987339‑2987473 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |