| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,990,325 | G→A | V12V (GTC→GTT) | yqeK ← | protein YqeK |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,990,325 | 0 | G | A | 100.0% | 34.1 / NA | 11 | V12V (GTC→GTT) | yqeK | protein YqeK |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (3/8); total (3/8) | |||||||||||
AGCATTAAGGAATTTTTTTAACGGAATCCTTGGTTTCTTTTTCGAGTCCGAATTTACAATATCATGCATATAGACCATTTCATGAATCTGCGAAAATTCAATGTCCATTGTATACCTCACATTTTTACCGTGACTCGATGTTA > NC_000913/2990253‑2990395 | aGCATTAAGGAATTTTTTTAACGGAATCCTTGGTTTCTTTTTCGAGTCCGAATTTACAATATCATGCATATAAACCATTTc < 1:682727/81‑1 (MQ=255)aGCATTAAGGAATTTTTTTAACGGAATCCTTGGTTTCTTTTTCGAGTCCGAATTTACAATATCATGCATATAAACCATTTc < 2:722499/81‑1 (MQ=255) cATTAAGGAATTTTTTTAACGGAATCCTTGGTTTCTTTTTCGAGTCCGAATTTACAATATCATGCATATAAACCATTTCAt < 1:517772/81‑1 (MQ=255) aTTAAGGAATTTTTTTAACGGAATCCTTGGTTTCTTTTTCGAGTCCGAATTTACAATATCATGCATATAAACCATTTCATg < 2:517773/81‑1 (MQ=255) ggAATTTTTTTAACGGAATCCTTGGTTTCTTTTTCGAGTCCGAATTTACAATATCATGCATATAAACCATTTCATGAATCt < 2:517774/81‑1 (MQ=255) aTCCTTGGTTTCTTTTTCGAGTCCGAATTTACAATATCATGCATATAAACCATTTCATGAATCTGCGAAAATTCAATGTc > 2:517786/1‑80 (MQ=255) tttCTTTTTCGAGTCCGAATTTACAATATCATGCATATAAACCATTTCATGAATCTGCGAAAATTCAATGTCCATTGtata > 2:517784/1‑81 (MQ=255) tACAATATCATGCATATAAACCATTTCATGAATCTGCGAAAATTCAATGTCCATTGTATACCTCACATTTTTACCGTGAc < 1:517775/80‑1 (MQ=255) cAATATCATGCATATAAACCATTTCATGAATCTGCGAAAATTCAATGTCCATTGTATACCTCACATTTTTACCGTGACTc < 2:517776/80‑1 (MQ=255) tCATGCATATAAACCATTTCATGAATCTGCGAAAATTCAATGTCCATTGTATACCTCACATTTTTACCGTGACTCGATGt > 2:517790/1‑80 (MQ=255) aTGCATATAAACCATTTCATGAATCTGCGAAAATTCAATGTCCATTGTATACCTCACATTTTTACCGTGACTCGATGTTa < 2:517777/80‑1 (MQ=255) | AGCATTAAGGAATTTTTTTAACGGAATCCTTGGTTTCTTTTTCGAGTCCGAATTTACAATATCATGCATATAGACCATTTCATGAATCTGCGAAAATTCAATGTCCATTGTATACCTCACATTTTTACCGTGACTCGATGTTA > NC_000913/2990253‑2990395 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |