| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 368,466 | C→T | intergenic (‑46/‑145) | mhpR ← / → mhpA | DNA‑binding transcriptional activator MhpR/putative 3‑(3‑hydroxyphenyl)propanoate/3‑hydroxycinnamate hydroxylase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 368,466 | 0 | C | T | 100.0% | 86.1 / NA | 25 | intergenic (‑46/‑145) | mhpR/mhpA | DNA‑binding transcriptional activator MhpR/putative 3‑(3‑hydroxyphenyl)propanoate/3‑hydroxycinnamate hydroxylase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (12/13); total (12/13) | |||||||||||
TTGTATTCCGTCTGCTCATTGTTCTGCATATTAATTGACATTTCTATAGTTAAAACAACGTGGTGCACCTGGTGCACATTCGGGCATGTTTTGATTGTAGCCGAAAACACCCTTCCTATACTGAGCGCACAATAAAAAATCATTTACATG > NC_000913/368392‑368541 | ttGTATTCCGTCTGCTCATTGTTCTGCATATTAATTGACATTTCTATAGTTAAAACAACGTGGTGCACCTGGTGTACAtt < 2:71666/80‑1 (MQ=255)ttGTATTCCGTCTGCTCATTGTTCTGCATATTAATTGACATTTCTATAGTTAAAACAACGTGGTGCACCTGGTGTACAtt < 2:71665/80‑1 (MQ=255) tGTATTCCGTCTGCTCATTGTTCTGCATATTAATTGACATTTCTATAGTTAAAACAACGTGGTGCACCTGGTGTACATTc < 2:71667/80‑1 (MQ=255) aTTCCGTCTGCTCATTGTTCTGCATATTAATTGACATTTCTATAGTTAAAACAACGTGGTGCACCTGGTGTACATTCggg > 1:71685/1‑80 (MQ=255) gTCTGCTCATTGTTCTGCATATTAATTGACATTTCTATAGTTAAAACAACGTGGTGCACCTGGTGTACATTCGGGCATGtt < 2:71668/81‑1 (MQ=255) aTTGTTCTGCATATTAATTGACATTTCTATAGTTAAAACAACGTGGTGCACCTGGTGTACATTCGGGCATGTTTTGAtt < 1:71669/79‑1 (MQ=255) aTTGTTCTGCATATTAATTGACATTTCTATAGTTAAAACAACGTGGTGCACCTGGTGTACATTCGGGCATGTTTTGATTg > 2:71689/1‑80 (MQ=255) aTTGTTCTGCATATTAATTGACATTTCTATAGTTAAAACAACGTGGTGCACCTGGTGTACATTCGGGCATGTTTTGATTGt < 2:71670/81‑1 (MQ=255) ttCTGCATATTAATTGACATTTCTATAGTTAAAACAACGTGGTGCACCTGGTGTACATTCGGGCATGTTTTGATTGTAGcc < 1:71672/81‑1 (MQ=255) ttCTGCATATTAATTGACATTTCTATAGTTAAAACAACGTGGTGCACCTGGTGTACATTCGGGCATGTTTTGATTGTAGc < 2:71671/80‑1 (MQ=255) cATATTAATTGACATTTCTATAGTTAAAACAACGTGGTGCACCTGGTGTACATTCGGGCATGTTTTGATTGTAGCCGaaaa > 1:71692/1‑81 (MQ=255) atatTAATTGACATTTCTATAGTTAAAACAACGTGGTGCACCTGGTGTACATTCGGGCATGTTTTGATTGTAGCCGaaaa > 1:71683/1‑80 (MQ=255) ttAATTGACATTTCTATAGTTAAAACAACGTGGTGCACCTGGTGTACATTCGGGCATGTTTTGATTGTAGCCGAAAACAcc > 2:71684/1‑81 (MQ=255) ttCTATAGTTAAAACAACGTGGTGCACCTGGTGTACATTCGGGCATGTTTTGATTGTAGCCGAAAACACCCTTCCTATACt > 2:71700/1‑81 (MQ=255) cTATAGTTAAAACAACGTGGTGCACCTGGTGTACATTCGGGCATGTTTTGATTGTAGCCGAAAACACCCTTCCTATACTg < 1:71673/80‑1 (MQ=255) aGTTAAAACAACGTGGTGCACCTGGTGTACATTCGGGCATGTTTTGATTGTAGCCGAAAACACCCTTCCTATACTGAgcg > 1:71702/1‑80 (MQ=255) gTTAAAACAACGTGGTGCACCTGGTGTACATTCGGGCATGTTTTGATTGTAGCCGAAAACACCCTTCCTATACTGAGCGca > 1:71682/1‑81 (MQ=255) tggtgCACCTGGTGTACATTCGGGCATGTTTTGATTGTAGCCGAAATCACCCTTCCTATACTGAGCGCACAATAAAAAAt > 1:71690/1‑80 (MQ=255) ggtgCACCTGGTGTACATTCGGGCATGTTTTGATTGTAGCCGAAAACACCCTTCCTATACTGAGCGCACAATAAAAAATCa > 2:71691/1‑81 (MQ=255) gtgCACCTGGTGTACATTCGGGCATGTTTTGATTGTAGCCGAAAACACCCTTCCTATACTGAGCGCACAATAAAAAATCa < 1:71674/80‑1 (MQ=255) gtgCACCTGGTGTACATTCGGCCATGTTTTGATTGTAGCCGAAAACACCCTTCCTATACTGAGCGCACAATAAAAAATCa < 1:71675/80‑1 (MQ=255) tgCACCTGGTGTACATTCGGGCATGTTTTGATTGTAGCCGAAAACACCCTTCCTATACTGAGCGCACAATAAAAAATCAtt < 1:71676/81‑1 (MQ=255) aCCTGGTGTACATTCGGGCATGTTTTGATTGTAGCCGAAAACACCCTTCCTATACTGAGCGCACAATAAAAAATCATTTa > 2:71694/1‑80 (MQ=255) aCCTGGTGTACATTCGGGCATGTTTTGATTGTAGCCGAAAACACCCTTCCTATACTGAGCGCACAATAAAAAATCATTTAc < 2:71677/81‑1 (MQ=255) tGGTGTACATTCGGGCATGTTTTGATTGTAGCCGAAAACACCCTTCCTATACTGAGCGCACAATAAAAAATCATTTACATg > 1:71696/1‑81 (MQ=255) | TTGTATTCCGTCTGCTCATTGTTCTGCATATTAATTGACATTTCTATAGTTAAAACAACGTGGTGCACCTGGTGCACATTCGGGCATGTTTTGATTGTAGCCGAAAACACCCTTCCTATACTGAGCGCACAATAAAAAATCATTTACATG > NC_000913/368392‑368541 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |