| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 403,320 | G→T | V14F (GTT→TTT) | psiF → | PsiF family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 403,320 | 0 | G | T | 100.0% | 41.1 / NA | 14 | V14F (GTT→TTT) | psiF | PsiF family protein |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (12/2); total (12/2) | |||||||||||
ATACGCTCATGGTTAAAACATGAAGAGGGATGGTGCTATGAAAATAACATTACTGGTTACCTTGCTTTTCGGTCTGGTTTTTTTAACCACCGTCGGCGCTGCCGAGAGAACTTTAACCCCACAACAACAGCGTATGACCTCCTGTAATCAGCAG > NC_000913/403244‑403397 | aTACGCTCATGGTTAAAACATGAAGAGGGATGGTGCTATGAAAATAACATTACTGGTTACCTTGCTTTTCGGTCTGTtttt > 2:78155/1‑81 (MQ=255) cGCTCATGGTTAAAACATGAAGAGGGATGGTGCTATGAAAATAACATTACTGGTTACCTTGCTTTTCGGTCTGtttttttt < 1:78142/81‑1 (MQ=255) cGCTCATGGTTAAAACATGAAGAGGGATGGTGCTATGAAAATAACATTACTGGTTACCTTGCTTTTCGGTCTGTtttttt > 1:78161/1‑80 (MQ=255) cATGGTTAAAACATGAAGAGGGATGGTGCTATGAAAATAACATTACTGGTTACCTTGCTTTTCGGTCTGTTTTTTTTAac > 1:78157/1‑80 (MQ=255) gTTAAAACATGAAGAGGGATGGTGCTATGAAAATAACATTACTGGTTACCTTGCTTTTCGGTCTGTTTTTTTTAaccacc < 1:78143/80‑1 (MQ=255) tAAAACATGAAGAGGGTTGGTGCTATGAAAATAATATTACTGGTTACCTTGCTTTTCGGTCTGTTTTTTTTAACCACAGTc > 2:78193/1‑81 (MQ=255) aTGAAGAGGGATGGTGCTATGAAAATAACATTACTGGTTACCTTGCTTTTCGGTCTGTTTTTTTTAACCACCGTCGGCGCt > 2:78166/1‑81 (MQ=255) tGCTATGAAAATAACATTACTGGTTACCTTGCTTTTCGGTCTGTTTTTTTTAACCACCGTCGGCGCTGCCGAGAGAACttt < 2:78144/81‑1 (MQ=255) aaaTAACATTACTGGTTACCTTGCTTTTCGGTCTGTTTTTTTTAACCACCGTCGGCGCTGCCGAGAGAACTTTAACCCca > 2:78160/1‑80 (MQ=255) ggTTACCTTGCTTTTCGGTCTGTTTTTTTTAACCACCGTCGGCGCTGCCGAGAGAACTTTAACCCCACAACAACAGCGTAt > 2:78153/1‑81 (MQ=255) ttGCTTTTCGGTCTGTTTTTTTTAACCACCGTCGGCGCTGCCGAGAGAACTTTAACCCCACAACAACAGCGTATGAcctcc > 1:78163/1‑81 (MQ=255) ttCGGTCTGTTTTTTTTAACCACCGTCGGCGCTGCCGAGAGAACTTTAACCCCACAACAACAGCGTATGACCTCCTGTAAt > 1:78175/1‑81 (MQ=255) gTCTGTTTTTTTTAACCACCGTCGGCGCTGCCGAGAGAACTTTAACCCCACAACAACAGCGTATGACCTCCTGTAATcag > 1:78174/1‑80 (MQ=255) cTGTTTTTTTTAACCACCGTCGGCGCTGCCGAGAGAACTTTAACCCCACAACAACAGCGTATGACCTCCTGTAATcagcag > 1:78162/1‑81 (MQ=255) cTGTTTTTTTTAACCACCGTCGGCGCTGCCGAGAGAACTTTAACCCCACAACAACAGCGTATGACCTCCTGTAATcagcag > 2:78173/1‑81 (MQ=255) | ATACGCTCATGGTTAAAACATGAAGAGGGATGGTGCTATGAAAATAACATTACTGGTTACCTTGCTTTTCGGTCTGGTTTTTTTAACCACCGTCGGCGCTGCCGAGAGAACTTTAACCCCACAACAACAGCGTATGACCTCCTGTAATCAGCAG > NC_000913/403244‑403397 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |