| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,665,562 | G→A | L83L (CTC→CTT) | gadX ← | DNA‑binding transcriptional dual regulator GadX |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,665,562 | 0 | G | A | 100.0% | 61.2 / NA | 19 | L83L (CTC→CTT) | gadX | DNA‑binding transcriptional dual regulator GadX |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (4/15); total (4/15) | |||||||||||
CATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATGTGCATGAAGATTTAATGCCTCCTCCTTGAGCATCGGGAGAAATAATGAAAGCGT > NC_000913/3665486‑3665639 | cATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACAAGTa < 2:654234/81‑1 (MQ=255) ctCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACAAGTAATGAAGAAACt > 2:654268/2‑81 (MQ=255) cTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACAAGTAATGAAGAAACtt < 1:654235/80‑1 (MQ=255) ttATTCTGCGTTATTTTCGCAACTTCCTGAAAAACAGGAATTTCTCTACTACAGTGATGAACAAGTAATGAAGAAACtttt > 2:866883/1‑81 (MQ=255) aTTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACAAGTAATGAAGAAACttttt < 1:654237/80‑1 (MQ=255) aTTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACAAGTAATGAAGAAACttttt < 1:654239/80‑1 (MQ=255) aTTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACAAGTAATGAAGAAACtttt < 1:654238/79‑1 (MQ=255) aTTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACAAGTAATGAAGAAACttt < 2:654236/78‑1 (MQ=255) aaaaaCAGGAATATCTCTACTACAGTGATGAACAAGTAATGAAGAAACTTTTTTATGTGCATGAAGATTTAATGcctcctc < 2:654240/81‑1 (MQ=255) aaaCAGGAATATCTCTACTACAGTGATGAACAAGTAATGAAGAAACTTTTTTATGTGCATGAAGATTTAATGcctcctcct > 1:654263/1‑81 (MQ=255) aaCAGGAATATCTCTACTACAGTGATGAACAAGTAATGAAGAAACTTTTTTATGTGCATGAAGATTTAATGCCTCCTCCtt < 2:654241/81‑1 (MQ=255) aCAGGAATATCTCTACTACAGTGATGAACAAGTAATGAAGAAACTTTTTTATGTGCATGAAGATTTAATGCCTCCTCCTTg < 2:654242/81‑1 (MQ=255) atatCTCTACTACAGTGATGAACAAGTAATGAAGAAACTTTTTTATGTGCATGAAGATTTAATGCCTCCTCCTTGAGCATc < 2:654243/81‑1 (MQ=255) tactacAGTGATGAACAAGTAATGAAGAAACTTTTTTATGTGCATGAAGATTTAATGCCTCCTCCTTGAGCATCGGgaga > 1:654266/1‑80 (MQ=255) tactacAGTGATGAACAAGTAATGAAGAAACTTTTTTATGTGCATGAAGATTTAATGACTCCTCCTTGAGCATCGGgag < 1:654244/79‑1 (MQ=255) ctacAGTGATGAACAAGTAATGAAGAAACTTTTTTATGTGCATGAAGATTTAATGCCTCCTCCTTGAGCATCGGGAGAaat < 1:654245/81‑1 (MQ=255) ctacAGTGATGAACAAGTAATGAAGAAACTTTTTTATGTGCATGAAGATTTAATGCCTCCTCCTTGAGCATCGGGAGAaat < 1:654246/81‑1 (MQ=255) tgaACAAGTAATGAAGAAACTTTTTTATGTGCATGAAGATTTAATGCCTCCTCCTTGAGCATCGGGAGAAATAATGAAAGc < 2:654247/81‑1 (MQ=255) aaCAAGTAATGAAGAAACTTTTTTATGTGCATGAAGATTTAATGCCTCCTCCTTGAGCATCGGGAGAAATAATGAAAGCgt < 1:654248/81‑1 (MQ=255) | CATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATGTGCATGAAGATTTAATGCCTCCTCCTTGAGCATCGGGAGAAATAATGAAAGCGT > NC_000913/3665486‑3665639 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |