Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,360,264	C→T	intergenic (‑233/+132)	cadB ← / ← cadC	lysine:cadaverine antiporter/DNA‑binding transcriptional activator CadC

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,360,264	0	C	T	100.0%	29.9 / NA	10	intergenic (‑233/+132)	cadB/cadC	lysine:cadaverine antiporter/DNA‑binding transcriptional activator CadC
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (7/3);  total (7/3)

TTTTTTATTAACACATCAGGATCGCAAGTTGATATCATGAAAAGATAAACATTTAATGTTTACAATGGATTGCGTGACATTCTCTGGTTAAATTTATGTAATAAAAATTATGCGGCAAATAAATTGCCGCAACATATTATACCAACAGG  >  NC_000913/4360192‑4360340                                                                         |                                                                             ttttttATTAACACATCAGGATCGCAAGTTGATATCATGAAAAGATAAACATTTAATGTTTACAATGGATTGTGTGACAtt                                                                      >  1:800551/1‑81 (MQ=255)        ttaACACATCAGGATCGCAAGTTGATATCATGAAAAGATAAACATTTAATGTTTACAATGGATTGTGTGACATTCTCTGGt                                                               >  1:800552/1‑81 (MQ=255)                    gATCGCAAGTTGATATCATGAAAAGATAAACATTTAATGTTTACAATGGATTGTGTGACATTCTCTGGTTAAATTTATGta                                                   <  2:800534/81‑1 (MQ=255)                                        aaaaGATAAACATTTAATGTTTACAATGGATTGTGTGACATTCTCTGGTTAAATTTATGTAATAAAAATTATGCGGCaaa                                >  1:800535/1‑80 (MQ=255)                                            gATAAACATTTAATGTTTACAATGGATTGTGTGACATTCTCTGGTTAAATTTATGTAATAAAAATTATGCGGCaaataaat                           >  1:800564/1‑81 (MQ=255)                                             aTAAACATTTAATGTTTACAATGGATTGTGTGACATTCTCTGGTTAAATTTATGTAATAAAAATTATGCGGCAAATAAAtt                          >  2:800560/1‑81 (MQ=255)                                                        aTGTTTACAATGGATTGTGTGACATTCTCTGGTTAAATTTATGTAATAAAAATTATGCGGCAAATAAATTGCCGCAACata               >  2:800553/1‑81 (MQ=255)                                                                    gATTGTGTGACATTCTCTGGTTAAATTTATGTAATAAAAATTATGCGGCAAATAAATTGCCGCAACATATTATACCAACa    <  2:800536/80‑1 (MQ=255)                                                                     aTTGTGTGACATTCTCTGGTTAAATTTATGTAATAAAAATTATGCGGCAAATAAATTGCCGCAACATATTATACCAACAgg  <  2:800537/81‑1 (MQ=255)                                                                     aTTGTGTGACATTCTCTGGTTAAATTTATGTAATAAAAATTATGCGGCAAATAAATTGCCGCAACATATTATACCAACAg   >  1:800565/1‑80 (MQ=255)                                                                         |                                                                             TTTTTTATTAACACATCAGGATCGCAAGTTGATATCATGAAAAGATAAACATTTAATGTTTACAATGGATTGCGTGACATTCTCTGGTTAAATTTATGTAATAAAAATTATGCGGCAAATAAATTGCCGCAACATATTATACCAACAGG  >  NC_000913/4360192‑4360340

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑