Predicted mutation | ||||||
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evidence | seq id | position | mutation | annotation | gene | description |
RA | NC_000913 | 720,905 | A→G | intergenic (+65/+151) | ybfK → / ← kdpE | uncharacterized protein YbfK/DNA‑binding transcriptional activator KdpE |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 720,905 | 0 | A | G | 100.0% | 23.2 / NA | 8 | intergenic (+65/+151) | ybfK/kdpE | uncharacterized protein YbfK/DNA‑binding transcriptional activator KdpE |
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (2/6); total (2/6) |
TCCTGATGTGAATGAAGGTGAAGATATTCTATCCAGGAAATACGGTTGAACTGTGAAGGTGATCAATAAAAAATGATCAATCTTAATTTATTTAATGATGAGCTTTTTACTCAGTAATATAAAA > NC_000913/720835‑720958 | tCCTGATGTGAATGAAGGTGAAGATATTCTATCCAGGAAATACGGTTGAACTGTGAAGGTGATCAATAAAGAATGATCaa < 2:135727/80‑1 (MQ=255) tgtgAATGAAGGTGAAGATATTCTATCCAGGAAATACGGTTGAACTGTGAAGGTGATCAATAAAGAATGATCAATCTTAat < 1:135728/81‑1 (MQ=255) gaaGGTGAAGATATTCTATCCAGGAAATACGGTTGAACTGTGAAGGTGATCAATAAAGAATGATCAATCTTAatttattt > 1:135741/1‑80 (MQ=255) tcaaGGAAATACGGTTGAACTGTGAAGGTGATCAATAAAGAATGATCAATCTTAATTTATTTAATGATGAGCTTTTTACt < 2:135729/77‑1 (MQ=255) aGGAAATACGGTTGAACTGTGAAGGTGATCAATAAAGAATGATCAATCTTAATTTATTTAATGATGAGCTTTTTACTCAGt < 2:135730/81‑1 (MQ=255) aaTACGGTTGAACTGTGAAGGTGATCAATAAAGAATGATCAATCTTAATTTATTTAATGATGAGCTTTTTACTCAGTAata < 1:135731/81‑1 (MQ=255) aTACGGTTGAACTGTGAAGGTGATCAATAAAGAATGATCAATCTTAATTTATTTAATGATGAGCTTTTTACTCAGTAatat < 2:135732/81‑1 (MQ=255) ggTTGAACTGTGAAGGTGATCAATAAAGAATGATCAATCTTAATTTATTTAATGATGAGCTTTTTACTCAGTAATATaaaa > 1:135742/1‑81 (MQ=255) | TCCTGATGTGAATGAAGGTGAAGATATTCTATCCAGGAAATACGGTTGAACTGTGAAGGTGATCAATAAAAAATGATCAATCTTAATTTATTTAATGATGAGCTTTTTACTCAGTAATATAAAA > NC_000913/720835‑720958 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |