| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 389,707 | Δ10,497 bp | [hemB]–[ddlA] | [hemB], yaiT, insF‑2, insE‑2, yaiT, iprA, ampH, sbmA, yaiW, yaiY, yaiZ, [ddlA] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 389707 | 400203 | 10497 | 39 [0] | [0] 39 | [hemB]–[ddlA] | [hemB],yaiT,insF‑2,insE‑2,yaiT,iprA,ampH,sbmA,yaiW,yaiY,yaiZ,[ddlA] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 389706 | 0 (0.000) | 39 (1.170) | 37/160 | 0.1 | 100% | coding (22/975 nt) | hemB | porphobilinogen synthase |
| ? | NC_000913 | 400204 = | 0 (0.000) | coding (720/1095 nt) | ddlA | D‑alanine‑‑D‑alanine ligase A | |||||
GCAACACCAGGTCGTTAAGGCTAAGTGTTGTCTCTTCAAACATAGCGCGCAGCGCAGGAGATTTGCGCAGGCGACGAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/389628‑389706‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTGCGGATTGTCGTTGCCCAGAACTGCGCATTCGATCTCACGACCTTTGATCCCTTGCTCAACGATCACTTTATGAT > NC_000913/400204‑400280 GCAACACCAGGTCGTTAAGGCTAAGTGTTGTCTCTTCAAACATAGCGCGCAGCGCAGGAGATTTGCGCAGGCGACGAGGTT > 2:67719/1‑81 AACACCAGGTCGTTAAGGCTAAGTGTTGTCTCTTCAAACATAGCGCGCAGCGCAGGAGATTTGCGCAGGCGACGAGGTTGC > 1:67700/1‑81 ACACCAGGTCGTTAAGGCTAAGTGTTGTCTCTTCAAACATAGCGCGCAGCGCAGGAGATTTGCGCAGGCGACGAGGTTGCG < 2:67421/81‑1 ACCAGGTCGTTAAGGCTAAGTGTTGTCTCTTCAAACATAGCGCGCAGCGTAGGAGATTTGCGCAGGCGACGAGGTTGCGGA > 2:67718/1‑81 ACCAGGTCGTTAAGGCTAAGTGTTGTCTCTTCAAACATAGCGCGCAGCGCAGGAGATTTGCGCAGGCGACGAGGTTGCGGA > 1:67696/1‑81 CAGGTCGTTAAGGCTAAGTGTTGTCTCTTCAAACATAGCGCGCAGCGCAGGAGATTTGCGCAGGCGACGAGGTTGCGGATT < 1:67422/81‑1 AGGTCGTTAAGGCTAAGTGTTGTCTCTTCAAACATAGCGCGCAGCGCAGGAGATTTGCGCAGGCGACGAGGTTGCGGATTG > 2:67711/1‑81 TCGTTAAGGCTAAGTGTTGTCTCTTCAAACATAGCGCGCAGCGCAGGAGATTTGCGCAGGCGACGAGGTTGCGGATTGTCG > 1:67723/1‑81 AAGGCTAAGTGTTGTCTCTTCAAACATAGCGCGCAGCGCAGGAGATTTGCGCAGGCGACGAGGTTGCGGATTGTCGTTGCC > 1:67715/1‑81 CTAAGTGTTGTCTCTTCAAACATAGCGCGCAGCGCAGGAGATTTGCGCAGGCGACGAGGTTGCGGATTGTCGTTGCCCAGA < 2:67423/81‑1 CTAAGTGTTGTCTCTTCAAACATAGCGCGCAGCGCAGGAGATTTGCGCAGGCGACGAGGTTGCGGATTGTCGTTGCCCAG > 2:67709/1‑80 AAGTGTTGTCTCTTCAAACATAGCGCGCAGCGCAGGAGATTTGCGCAGGCGACGAGGTTGCGGATTGTCGTTGCCCAGAAC > 2:67713/1‑81 GTGTTGTCTCTTCAAACATAGCGCGCAGCGCAGGAGATTTGCGCAGGCGACGAGGTTGCGGATTGTCGTTGCCCAGAACTG > 2:67717/1‑81 TGTTGTCTCTTCAAACATAGCGCGCAGCGCAGGAGATTTGCGCAGGCGACGAGGTTGCGGATTGTCGTTGCCCAGAACTGC < 2:67424/81‑1 GTTGTCTCTTCAAACATAGCGCGCAGCGCAGGAGATTTGCGCAGGCGACGAGGTTGCGGATTGTCGTTGCCCAGAACTGCG > 2:67725/1‑81 CTTCAAACATAGCGCGCAGCGCAGGAGATTTGCGCAGGCGACGAGGTTGCGGATTGTCGTTGCCCAGAACTGCGCATTCGA > 1:67707/1‑81 TTCAAACATAGCGCGCAGCGCAGGAGATTTGCGCAGGCGACGAGGTTGCGGATTGTCGTTGCCCAGAACTGCGCATTC < 1:67425/78‑1 CAAACATAGCGCGCAGCGCAGGAGATTTGCGCAGGCGACGAGGTTGCGGATTGTCGTTGCCCAGAACTGCGCATTCGATCT > 1:67703/1‑81 CAAACATAGCGCGCAGCGCAGGAGATTTGCGCAGGCGACGAGGTTGCGGATTGTCGTTGCCCAGAACTGCGCATTCGATC < 1:67426/80‑1 CATAGCGCGCAGCGCAGGAGATTTGCGCAGGCGACGAGGTTGCGGATTGTCGTTGCCCAGAACTGCGCATTCGATCTCACG < 1:67427/81‑1 TAGCGCGCAGCGCAGGAGATTTGCGCAGGCGACGAGGTTGCGGATTGTCGTTGCCCAGAACTGCGCATTCGATCTCACGAC < 2:67428/81‑1 AGCGCGCAGCGCAGGAGATTTGCGCAGGCGACGAGGTTGCGGATTGTCGTTGCCCAGAACTGCGCATTCGATCTCACGACC > 1:67706/1‑81 GCGCGCAGCGCAGGAGATTTGCGCAGGCGACGAGGTTGCGGATTGTCGTTGCCCAGAACTGCGCATTCGATCTCACGACCT < 2:67429/81‑1 GCGCGCAGCGCAGGAGATTTGCGCAGGCGACGAGGTTGCGGATTGTCGTTGCCCAGAACTGCGCATTCGATCTCACGACC < 2:67430/80‑1 GCAGCGCAGGAGATTTGCGCAGGCGACGAGGTTGCGGATTGTCGTTGCCCAGAACTGCGCATTCGATCTCACGACCTTTGA < 2:67431/81‑1 GCGCAGGAGATTTGCGCAGGCGACGAGGTTGCGGATTGTCGTTGCCCAGAACTGCGCATTCGATCTCACGACCTTTGATCC < 2:67432/81‑1 CGCAGGAGATTTGCGCAGGCGACGAGGTTGCGGATTGTCGTTGCCCAGAACTGCGCATTCGATCTCACGACCTTTGATCCC > 2:67727/1‑81 GCAGGAGATTTGCGCAGGCGACGAGGTTGCGGATTGTCGTTGCCCAGAACTGCGCATTCGATCTCACGACCTTTGATCCCT > 2:67729/1‑81 CAGGAGATTTGCGCAGGCGACGAGGTTGCGGATTGTCGTTGCCCAGAACTGCGCATTCGATCTCACGACCTTTGATCCCTT < 2:67433/81‑1 AGGAGATTTGCGCAGGCGACGAGGTTGCGGATTGTCGTTGCCCAGAACTGCGCATTCGATCTCACGACCTTTGATCCCTTG < 2:67434/81‑1 AGATTTGCGCAGGCGACGAGGTTGCGGATTGTCGTTGCCCAGAACTGCGCATTCGATCTCACGACCTTTGATCCCTTGCTC < 1:67435/81‑1 GATTTGCGCAGGCGACGAGGTTGCGGATTGTCGTTGCCCAGAACTGCGCATTCGATCTCACGACCTTTGATCCCTTGCTCA < 2:67437/81‑1 GATTTGCGCAGGCGACGAGGTTGCGGATTGTCGTTGCCCAGAACTGCGCATTCGATCTCACGACCTTTGATCCCTTGCTCA < 2:67436/81‑1 TGCGCAGGCGACGAGGTTGCGGATTGTCGTTGCCCAGAACTGCGCATTCGATCTCACGACCTTTGATCCCTTGCTCAACGA > 2:67714/1‑81 TGCGCAGGCGACGAGGTTGCGGATTGTCGTTGCCCAGAACTGCGCATTCGATCTCACGACCTTTGATCCCTTGCTCAACG < 1:67375/80‑1 GCAGGCGACGAGGTTGCGGATTGTCGTTGCCCAGAACTGCGCATTCGATCTCACGACCTTTGATCCCTTGCTCAACGATCA < 1:67398/81‑1 ACGAGGTTGCGGATTGTCGTTGCCCAGAACTGCGCATTCGATCTCACGACCTTTGATCCCTTGCTCAACGATCACTTTAT > 1:67716/1‑80 CGAGGTTGCGGATTGTCGTTGCCCAGAACTGCGCATTCGATCTCACGACCTTTGATCCCTTGCTCAACGATCACTTTATGA < 1:67678/81‑1 GAGGTTGCGGATTGTCGTTGCCCAGAACTGCGCATTCGATCTCACGACCTTTGATCCCTTGCTCAACGATCACTTTATGAT < 2:67679/81‑1 GCAACACCAGGTCGTTAAGGCTAAGTGTTGTCTCTTCAAACATAGCGCGCAGCGCAGGAGATTTGCGCAGGCGACGAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/389628‑389706‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTGCGGATTGTCGTTGCCCAGAACTGCGCATTCGATCTCACGACCTTTGATCCCTTGCTCAACGATCACTTTATGAT > NC_000913/400204‑400280 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |