| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,184,972 | T→A | Q208L (CAG→CTG) | potA ← | spermidine preferential ABC transporter ATP binding subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,184,972 | 0 | T | A | 100.0% | 73.3 / NA | 20 | Q208L (CAG→CTG) | potA | spermidine preferential ABC transporter ATP binding subunit |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base A (11/9); total (11/9) | |||||||||||
TCACGCGGCGTGCCGTCTTGCTCAATGCGACCATCGCGCATCACCACAATCCTGTCTGACATGGTGAGTGCTTCTTCCTGGTCGTGAGTCACAAAGACGAATGTAATGCCAAGCTTACGCTGTAACGCTTTCAGCTCGTTCTGCATTTGCTTACG > NC_000913/1184894‑1185048 | tCACGCGGCGTGCCGTCTTGCTCAATGCGACCATCGCGCATCACCACAATCCTGTCTGACATGGTGAGTGCTTCTTCCAgg > 1:197004/1‑81 (MQ=255) aCGCGGCGTGCCGTCTTGCTCAATGCGACCATCGCGCATCACCACAATCCTGTCTGACATGGTGAGTGCTTCTTCCAGGTc > 1:197017/1‑81 (MQ=255) gTGCCGTCTTGCTCAATGCGACCATCGCGCATCACCACAATCCTGTCTGACATGGTGAGTGCTTCTTCCAGGTCGTGAGt > 1:197010/1‑80 (MQ=255) gCTCAATGCGACCATCGCGCATCACCACAATCCTGTCTGACATGGTGAGTGCTTCTTCCAGGTCGTGAGTCACAAAGAc < 2:196976/79‑1 (MQ=255) gCTCAATGCGACCATCGCGAATCACCACGATCCTGTCTGACATGGTGAGTGCTTGTTCCAGGTCGTAAGTCACAAAGACg < 2:196975/80‑1 (MQ=255) tGCGACCATCGCGCATCACCACAATTCTGTCTGACATGGTGAGTGCTTCTTCCAGGTCGTGAGTCACAAAGACGAATGTaa < 2:196977/81‑1 (MQ=255) gACCATCGCGCATCACCACAATCCTGTCTGACATGGTGAGTGCTTCTTCCAGGTCGTGAGTCACAAAGACGAATGTAATGc > 2:197021/1‑81 (MQ=255) ccATCGCGCATCACCACAATCCTGTCTGACATGGTGAGTGCTTCTTCCAGGTCGTGAGTCACAAAGACGAATGTAATGcc > 1:197011/1‑80 (MQ=255) aTCACCACAATCCTGTCTGACATGGTGAGTGCTTCTTCCAGGTCGTGAGTCACAAAGACGAATGTAATGCCAAGCTTACGc > 1:197016/1‑81 (MQ=255) ccacAATCCTGTCTGACATGGTGAGTGCTTCTTCCAGGTCGTGAGTCACAAAGACGAATGTAATGCCAAGCTTACGCTGt > 1:197033/1‑80 (MQ=255) ccacAATCCTGTCTGACATGGTGAGTGCTTCTTCCAGGTCGTGAGTCACAAAGACGAATGTAATGCCAAGCTTACGCTGTa < 1:196979/81‑1 (MQ=255) ccacAATCCTGTCTGACATGGTGAGTGCTTCTTCCAGGTCGTGAGTCACAAAGACGAATGTAATGCCAAGCTTACGCTGTa < 2:196978/81‑1 (MQ=255) cTGTCTGACATGGTGAGTGCTTCTTCCAGGTCGTGAGTCACAAAGACGAATGTAATGCCAAGCTTACGCTGTAACGCTTTc < 2:196980/81‑1 (MQ=255) aCATGGTGAGTGCTTCTTCCAGGTCGTGAGTCACAAAGACGAATGTAATGCCAAGCTTACGCTGTAACGCTTTCAGCTc < 2:196982/79‑1 (MQ=255) aCATGGTGAGTGCTTCTTCCAGGTCGTGAGTCACAAAGACGAATGTAATGCCAAGCTTACGCTGTAACGCTTTCAGCTCg < 1:196981/80‑1 (MQ=255) aTGGTGAGTGCTTCTTCCAGGTCGTGAGTCACAAAGACGAATGTAATGCCAAGCTTACGCTGTAACGCTTTCAGCTCGTTc < 2:196983/81‑1 (MQ=255) ggTGAGTGCTTCTTCCAGGTCGTGAGTCACAAAGACGAATGTAATGCCAAGCTTACGCTGTAACGCTTTCAGCTCGTTCTg > 1:197019/1‑81 (MQ=255) cttcttCCAGGTCGTGAGTCACAAAGACGAATGTAATGCCAAGCTTACGCTGTAACGCTTTCAGCTCGTTCTGCATTTGCt > 2:197025/1‑81 (MQ=255) ttcttcCAGGTCGTGAGTCACAAAGACGAATGTAATGCCAAGCTTACGCTGTAACGCTTTCAGCTCGTTCTGCATTTGCt > 1:197031/1‑80 (MQ=255) tcCAGGTCGTGAGTCACAAAGACGAATGTAATGCCAAGCTTACGCTGTAACGCTTTCAGCTCGTTCTGCATTTGCTTACg > 2:197029/1‑80 (MQ=255) | TCACGCGGCGTGCCGTCTTGCTCAATGCGACCATCGCGCATCACCACAATCCTGTCTGACATGGTGAGTGCTTCTTCCTGGTCGTGAGTCACAAAGACGAATGTAATGCCAAGCTTACGCTGTAACGCTTTCAGCTCGTTCTGCATTTGCTTACG > NC_000913/1184894‑1185048 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |