New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 568265 =5090 (23.320)82 (0.420) 25/166 16.7 1.7% intergenic (+18/‑50) renD/emrE pseudogene, DLP12 prophage;Phage or Prophage Related/DLP12 prophage; multidrug resistance protein
?NC_000913 568300 = 4836 (24.830)intergenic (+53/‑15) renD/emrE pseudogene, DLP12 prophage;Phage or Prophage Related/DLP12 prophage; multidrug resistance protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 5200 total aligned reads displayed.

GATTTTTAAGGAGTGTCGCCAGAGTGCCGCGATGAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAATATGCTATGAACCCTTATATTTATCTTGGTGGTGCAATACTTGCAGAGGTCATTGG  >  NC_000913/568166‑568364
                                                                                                   |                                                                                                   
 aTTTTTAAGGAGTGTCGCCAGAGTGCCGCGATGAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGtgagttgagt                                                                                                    >  1:195212/1‑100 (MQ=255)
  tttttAAGGAGTGTCGCCAGAGTGCCGCGATGAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTgagttgagtt                                                                                                   >  1:2163312/1‑100 (MQ=255)
  tttttAAGGAGTGTCGCCAGAGTGCCGCGATGAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTgagttgagtt                                                                                                   <  1:2974764/100‑1 (MQ=255)
    tttAAGGAGTGTCGCCAGAGTGCCGCGATGAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCa                                                                                                 >  1:3475779/1‑100 (MQ=255)
      tAAGGAGTGTCGCCAGAGTGCCGCGATGAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCaaa                                                                                               >  1:3192249/1‑100 (MQ=255)
      tAAGGAGTGTCGCCAGAGTGCCGCGATGAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCaaa                                                                                               >  1:2401489/1‑100 (MQ=255)
       aaGGAGTGTCGCCAGAGTGCCGCGATGAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAAc                                                                                              <  1:1359922/100‑1 (MQ=255)
       aaGGAGTGTCGCCAGAGTGCCGCGATGAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAAc                                                                                              <  1:2043444/100‑1 (MQ=255)
         ggAGTGTCGCCAGAGTGCCGCGATGAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTg                                                                                            >  1:1768075/1‑100 (MQ=255)
            gtgtCGCCAGAGTGCCGCGATGAAACGGGTATTGAGGGTATATAAAAGAACATCGATGGGAACACAATGATGAAACAGGtgagttgagt                                                                                                    >  2:1064655/1‑89 (MQ=255)
            gtgtCGCCAGAGTGCCGCGATGAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGtgagttgagt                                                                                                    <  2:1334249/89‑1 (MQ=255)
            gtgtCGCCAGAGTGCCGCGATGAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTgtag                                                                                         >  1:710412/1‑100 (MQ=255)
              gtCGCCAGAGTGCCGCGATGAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTc                                                                                                  >  2:455424/1‑89 (MQ=255)
              gtCGCCAGAGTGCCGCGATGAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTgtagta                                                                                       <  1:1105595/100‑1 (MQ=255)
              gtCGCCAGAGTGCCGCGATGAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTgtagta                                                                                       <  1:933237/100‑1 (MQ=255)
              gtCGCCAGAGTGCCGCGATGAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTgtagta                                                                                       <  1:3085097/100‑1 (MQ=255)
              gtCGCCAGAGTGCCGCGATGAAACGGGTATTGAGGGTATATAAAAGAACATCAATAGGAACACAATGATGAAACAGGTGAGTTGAGTTc                                                                                                  <  2:4282452/89‑1 (MQ=255)
               tCGCCAGAGTGCCGCGATGAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCa                                                                                                 <  2:1945914/89‑1 (MQ=255)
                cGCCAGAGTGCCGCGATGAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCaa                                                                                                <  2:3085922/89‑1 (MQ=255)
                cGCCAGAGTGCCGCGATGAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGTACa                                                                                     <  1:2795362/100‑1 (MQ=255)
                cGCCAGAGTGCCGCGATGAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGTACa                                                                                     >  1:3277815/1‑100 (MQ=255)
                 gCCAGAGTGCCGCGATGAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGTACaa                                                                                    <  1:100278/100‑1 (MQ=255)
                  ccAGAGTACCGCGATGAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGTACAAt                                                                                   >  1:3964467/1‑100 (MQ=255)
                    agagTGCCGCGATGAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTg                                                                                            >  2:4186625/1‑89 (MQ=255)
                     gagTGCCGCGATGAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTgt                                                                                           <  2:2425691/89‑1 (MQ=255)
                       gTGCCGCGATGAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTgtag                                                                                         <  2:4919210/89‑1 (MQ=255)
                        tGCCGCGATGAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTgtagt                                                                                        >  2:27677/1‑89 (MQ=255)
                         gCCGCGATGAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTGAAACTGTAGTACAATTCTCTcc                                                                            >  1:5183978/1‑100 (MQ=255)
                         gCCGCGATGAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTgtagta                                                                                       >  2:873091/1‑89 (MQ=255)
                         gCCGCGATGAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGTACAATTCTCTcc                                                                            >  1:5398159/1‑100 (MQ=255)
                           cgcgATGAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGTACa                                                                                     >  2:2133022/1‑89 (MQ=255)
                           cgcgATGAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGTACAATTCTCTCCAg                                                                          <  1:1193987/100‑1 (MQ=255)
                           cgcgATGAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGTACAATTCTCTCCAg                                                                          >  1:507265/1‑100 (MQ=255)
                             cgATGAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGTACAAt                                                                                   >  2:5414238/1‑89 (MQ=255)
                             cgATGAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGGTGAGTTCAAACTGTAGTACAAt                                                                                   >  2:2967830/1‑89 (MQ=255)
                              gATGAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGTACAATTCTCTCCAGttt                                                                       >  1:3370147/1‑100 (MQ=255)
                               aTGAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGTACAATtc                                                                                 <  2:3808773/89‑1 (MQ=255)
                               aTGAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGTACAATtc                                                                                 <  2:2545465/89‑1 (MQ=255)
                                 gAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGTACAATtctc                                                                               >  2:1241528/1‑89 (MQ=255)
                                 gAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGTACAATtctc                                                                               <  2:1634399/89‑1 (MQ=255)
                                     cGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGTTCAATTCTCTCCa                                                                           >  2:2232563/1‑89 (MQ=255)
                                     cGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGTACAATTCTCTCCAGTTTGAACAgg                                                                >  1:604464/1‑100 (MQ=255)
                                      gggTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGTACAATTCTCTCCAg                                                                          <  2:5131417/89‑1 (MQ=255)
                                       ggTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGTACAATTCTCTCCAGt                                                                         >  2:3622751/1‑89 (MQ=255)
                                         tATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGTACAATTCTCTCCAGttt                                                                       >  2:205284/1‑89 (MQ=255)
                                         tATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGTACAATTCTCTCCAGttt                                                                       <  2:3396860/89‑1 (MQ=255)
                                         tATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAg                                                            <  1:1669262/100‑1 (MQ=255)
                                          aTTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGTACAATTCTCTCCAGTTTg                                                                      <  2:1733887/89‑1 (MQ=255)
                                          aTTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGTACAATTCTCTCCAGTTTg                                                                      >  2:4365729/1‑89 (MQ=255)
                                          aTTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGa                                                           >  1:5298692/1‑100 (MQ=255)
                                           ttGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGTACAATTCTCTCCAGTTTGa                                                                     <  2:3177639/89‑1 (MQ=255)
                                             gAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGTACAATTCTCTCCAGTTTGAAc                                                                   <  2:3508020/89‑1 (MQ=255)
                                              aGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAatat                                                       <  1:2293979/100‑1 (MQ=255)
                                               gggTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGTACAATTCTCTCCAGTTTGAACAg                                                                 >  2:530171/1‑89 (MQ=255)
                                                ggTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGTACAATTCTCTCCAGTTTGAACAgg                                                                >  2:265509/1‑89 (MQ=255)
                                                   atataAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAATATGCTAt                                                  >  1:4077036/1‑100 (MQ=255)
                                                    tataAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAg                                                            >  2:3891658/1‑89 (MQ=255)
                                                    tataAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAATATGCTATg                                                 >  1:4863928/1‑100 (MQ=255)
                                                      taAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGTACAATTCTCTCCAGTTTGAGCAGGAAAGaa                                                          >  2:481557/1‑89 (MQ=255)
                                                       aaaaGAACATCAATGGGAACACAATGATGAAACAGGTGCGTTGAGTTCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAat                                                         >  2:1172115/1‑89 (MQ=255)
                                                         aaGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAATATGCTATGAAccc                                            <  1:2594140/100‑1 (MQ=255)
                                                          aGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAATATg                                                      >  2:3283361/1‑89 (MQ=255)
                                                          aGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAATATGCTATGAACCCt                                           >  1:1851272/1‑100 (MQ=255)
                                                            aaCATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAATATGCTATGAACCCTta                                         <  1:1438957/100‑1 (MQ=255)
                                                             ataTCAATGGGAACACAATGATGAACCAGGTGAGTTGAGTTCAAACTGTAGTACAATGCTCTCCAGTTTGAACAGGAAAGAATATGCTa                                                   <  2:4735424/87‑1 (MQ=255)
                                                              cATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAATATGCTATGAACCCTtata                                       <  1:4171797/100‑1 (MQ=255)
                                                                tCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAATATGCTATGa                                                >  2:1550063/1‑89 (MQ=255)
                                                                tCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAATATGCTATGAACCCTTATAtt                                     >  1:3577896/1‑100 (MQ=255)
                                                                tCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAATATGCTATGAACCCTTATAtt                                     >  1:1551628/1‑100 (MQ=255)
                                                                 cAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAATATGCTATGaa                                               >  2:5221352/1‑89 (MQ=255)
                                                                     gggAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAATATGCTATGAACCCt                                           >  2:1432994/1‑89 (MQ=255)
                                                                     gggAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAATATGCTATGAACCCt                                           <  2:2853549/89‑1 (MQ=255)
                                                                       gAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAATATGCTATGAACCCTta                                         >  2:4089803/1‑89 (MQ=255)
                                                                       gAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAATATGCTATGAACCCTTATATTTATCTtg                              >  1:5509347/1‑100 (MQ=255)
                                                                       gAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAATATGCTATGAACCCTTATATTTATCTtg                              <  1:3688371/100‑1 (MQ=255)
                                                                        aaCACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAATATGCTATGAACCCTTATATTTATCTtgg                             >  1:4247502/1‑100 (MQ=255)
                                                                          cacaATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAATATGCTATGAACCCTTatat                                      >  2:689030/1‑89 (MQ=255)
                                                                          cacaATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAATATGCTATGAACCCTTATATTTATCTtggtg                           <  1:4339628/100‑1 (MQ=255)
                                                                            caATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAATATGCTATGAACCCTTATAttt                                    >  2:770576/1‑89 (MQ=255)
                                                                            caATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAATATGCTATGAACCCTTATATTTATCTTggtggt                         >  1:1275709/1‑100 (MQ=255)
                                                                             aaTGATGAAACAGGTGAGTTGAGTTCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAATATGCTATGAACCCTTATATTTATCTTGgtggtg                        >  1:4679599/1‑100 (MQ=255)
                                                                              atgatgAAACAGGTGAGTTGAGTTCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAATATGCTATGAACCCTTATATTTAt                                  >  2:3970650/1‑89 (MQ=255)
                                                                               tgatgaAACAGGTGAGTTGAGTTCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAATATGCTATGAACCCTTATATTTATCTTGGTGGTGCa                      >  1:2499902/1‑100 (MQ=255)
                                                                               tgatgaAACAGGTGAGTTGAGTTCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAATATGCTATGAACCCTTATATTTATCTTGGTGGTGCa                      <  1:839017/100‑1 (MQ=255)
                                                                                  tgaAACAGGTGAGTTGAGTTCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAATATGCTATGAACCCTTATATTTATCTtg                              <  2:5021914/89‑1 (MQ=255)
                                                                                     aaCAGGTGAGTTGAGTTCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAATATGCTATGAACCCTTATATTTATCTtggtg                           >  2:4442517/1‑89 (MQ=255)
                                                                                     aaCAGGTGAGTTGAGTTCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAATATGCTATGAACCCTTATATTTATCTtggtg                           >  2:2340624/1‑89 (MQ=255)
                                                                                      aCAGGTGAGTTGAGTTCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAATATGCTATGAACCCTTATATTTATCTTGGTGGTGCAATACTTg               <  1:3880272/100‑1 (MQ=255)
                                                                                         ggTGAGTTGAGTTCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAATATGCTATGAACCCTTATATTTATCTTGGTGGTGc                       >  2:4660340/1‑89 (MQ=255)
                                                                                         ggTGAGTTGAGTTCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAATATGCTATGAACCCTTATATTTATCTTGGTGGTGCAATACTTGCag            <  1:4563864/100‑1 (MQ=255)
                                                                                          gTGAGTTGAGTTCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAATATGCTATGAACCCTTATATTTATCTTGGTGGTGCAATACTTGCaga           <  1:496897/100‑1 (MQ=255)
                                                                                            gagttgagttCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAATATGCTATGAACCCTTATATTTATCTTGGTGGTGCAATACTTGCAGAgg         <  1:2686759/100‑1 (MQ=255)
                                                                                             agttgagttCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAATATGCTATGAACCCTTATATTTATCTTGGTGGTGCAATACTTGCAGAGGt        <  1:288322/100‑1 (MQ=255)
                                                                                              gttgagttCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAATATGCTATGAACCCTTATATTTATCTTGGTGGTGCAATACTTGCAGAGGTc       <  1:4764231/100‑1 (MQ=255)
                                                                                                 gagttCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAATATGCTATGAACCCTTATATTTATCTTGGTGGTGCAATACTTg               >  2:597618/1‑89 (MQ=255)
                                                                                                 gagttCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAATATGCTATGAACCCTTATATTTATCTTGGTGGTGCAATACTTGCAGAGGTCAtt    >  1:4446031/1‑100 (MQ=255)
                                                                                                 gagttCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAATATGCTATGAACCCTTATATTTATCTTGGTGGTGCAATACTTGCAGAGGTCAtt    >  1:3784894/1‑100 (MQ=255)
                                                                                                  agttCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAATATGCTATGAACCCTTATATTTATCTTGGTGGTGCAATACTTGc              <  2:3709134/89‑1 (MQ=255)
                                                                                                   gttCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAATATGCTATGAACCCTTATATTTATCTTGGTGGTGCAATACTTGCa             <  2:1823732/89‑1 (MQ=255)
                                                                                                   gttCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAATATGCTATGAACCCGTATTTTTCTCTTGGTGGTGCACTACTTGCa             >  2:5515737/1‑89 (MQ=255)
                                                                                                   |                                                                                                   
GATTTTTAAGGAGTGTCGCCAGAGTGCCGCGATGAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAATATGCTATGAACCCTTATATTTATCTTGGTGGTGCAATACTTGCAGAGGTCATTGG  >  NC_000913/568166‑568364

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.