New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 572316 =5590 (25.620)111 (0.570) 33/166 13.2 2.2% intergenic (+65/‑52) ybcM/ylcH DLP12 prophage; putative DNA‑binding transcriptional regulator/uncharacterized protein, DLP12 prophage
?NC_000913 572345 = 4659 (23.920)intergenic (+94/‑23) ybcM/ylcH DLP12 prophage; putative DNA‑binding transcriptional regulator/uncharacterized protein, DLP12 prophage
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 5669 total aligned reads displayed.

CACCAAGAGAGATAAGAAAAGCTTCCAGAGAGTAAAAGTGTTTTAAGAAGGAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAA  >  NC_000913/572217‑572415
                                                                                                   |                                                                                                   
cacCAAGAGAGATAAGAAAAGCTTCCAGAGAGTAAAAGTGTTTTAAGAAGGAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATg                                                                                                     <  1:4776089/100‑1 (MQ=255)
  ccAAGAGAGATAAGAAAAGCTTCCAGAGAGTAAAAGTGTTTTAAGAAGGAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGtn                                                                                                   <  1:2996785/100‑2 (MQ=255)
  ccAAGAGAGATAAGAAAAGCTTCCAGAGAGTAAAAGTGTTTTAAGAAGGAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTc                                                                                                   >  1:5353036/1‑100 (MQ=255)
   cAAGAGAGATAAGAAAAGCTTCCAGAGAGTAAAAGTGTTTTAAGAAGGAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCa                                                                                                  >  1:3264213/1‑100 (MQ=255)
    aaGAGAGATAAGAAAAGCTTCCAGAGAGTAAAAGTGTTTTAAGAAGGAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCAc                                                                                                 <  1:112841/100‑1 (MQ=255)
    aaGAGAGATAAGAAAAGCTTCCAGAGAGTAAAAGTGTTTTAAGAAGGAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCAc                                                                                                 <  1:977825/100‑1 (MQ=255)
    aaGAGAGATAAGAAAAGCTTCCAGAGAGTAAAAGTGTTTTAAGAAGGAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCAc                                                                                                 >  1:1896680/1‑100 (MQ=255)
      gagagaTAAGAAAAGCTTCCAGAGAGTAAAAGTGTTTTAAGAAGGAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCg                                                                                               <  1:485238/100‑1 (MQ=255)
        gagaTAAGAAAAGCTTCCAGAGAGTAAAAGTGTTTTAAGAAGGAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGa                                                                                             >  1:3766388/1‑100 (MQ=255)
          gaTAAGAAAAGCTTCCAGAGAGTAAAAGTGTTTTAAGAAGGAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGc                                                                                           >  1:4611054/1‑100 (MQ=255)
             aaGAAAAGCTTCCAGAGAGTAAAAGTGTTTTAAGAAGGAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTc                                                                                                   >  2:151269/1‑89 (MQ=255)
              aGAAAAGCTTCCAGAGAGTAAAAGTGTTTTAAGAAGGAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCa                                                                                                  >  2:3769216/1‑89 (MQ=255)
              aGAAAAGCTTCCAGAGAGTAAAAGTGTTTTAAGAAGGAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCa                                                                                                  >  2:5466723/1‑89 (MQ=255)
              aGAAAAGCTTCCAGAGAGTAAAAGTGTTTTAAGAAGGAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGa                                                                                       >  1:1724967/1‑100 (MQ=255)
              aGAAAAGCTTCCAGAGAGTAAAAGTGTTTTAAGAAGGAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGa                                                                                       <  1:804690/100‑1 (MQ=255)
               gAAAAGCTTCCAGAGAGTAAAAGTGTTTTAAGAAGGAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGaa                                                                                      >  1:1572855/1‑100 (MQ=255)
               gAAAAGCTTCCAGAGAGTAAAAGTGTTTTAAGAAGGAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGaa                                                                                      >  1:5132224/1‑100 (MQ=255)
                aaaaGCTTCCAGAGAGTAAAAGTGTTTTAAGAAGGAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGaac                                                                                     <  1:5235245/100‑1 (MQ=255)
                aaaaGCTTCCAGAGAGTAAAAGTGTTTTAAGAAGGAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGaac                                                                                     <  1:3951336/100‑1 (MQ=255)
                 aaaGCTTCCAGAGAGTAAAAGTGTTTTAAGAAGGAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCg                                                                                               <  2:5059204/89‑1 (MQ=255)
                 aaaGCTTCCAGAGAGTAAAAGTGTTTTAAGAAGGAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGaaca                                                                                    >  1:3887720/1‑100 (MQ=255)
                  aaGCTTCCAGAGAGTAAAAGTGTTTTAAGAAGGAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGaacaa                                                                                   <  1:4944002/100‑1 (MQ=255)
                  aaGCTTCCAGAGAGTAAAAGTGTTTTAAGAAGGAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGaacaa                                                                                   >  1:2901223/1‑100 (MQ=255)
                   aGCTTCCAGAGAGTAAAAGTGTTTTAAGAAGGAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGaacaac                                                                                  <  1:128066/100‑1 (MQ=255)
                    gCTTCCAGAGAGTAAAAGTGTTTTAAGAAGGAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAg                                                                                            >  2:5165686/1‑89 (MQ=255)
                        ccAGAGAGTAAAAGTGTTTTAAGAAGGAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTg                                                                                        <  2:2237614/89‑1 (MQ=255)
                        ccAGAGAGTAAAAGTGTTTTAAGAAGGAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCgg                                                                             <  1:1633073/100‑1 (MQ=255)
                         cAGAGAGTAAAAGTGTTTTAAGAAGGAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGa                                                                                       >  2:4427212/1‑89 (MQ=255)
                         cAGAGAGTAAAAGTGTTTTAAGAAGGAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGa                                                                                       >  2:5571414/1‑89 (MQ=255)
                          agagagTAAAAGTGTTTTAAGAAGGAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGaa                                                                                      >  2:324198/1‑89 (MQ=255)
                          agagagTAAAAGTGTTTTAAGAAGGAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTg                                                                           >  1:3650673/1‑100 (MQ=255)
                           gagagTAAAAGTGTTTTAAGAAGGAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGa                                                                          <  1:3078149/100‑1 (MQ=255)
                            agagTAAAAGTGTTTTAAGAAGGAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGaaca                                                                                    <  2:2895104/89‑1 (MQ=255)
                             gagTAAAAGTGTTTTAAGAAGGAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACt                                                                        >  1:1995478/1‑100 (MQ=255)
                                tAAAAGTGTTTTAAGAAGGAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTc                                                                                >  2:1435812/1‑89 (MQ=255)
                                tAAAAGTGTTTTAAGAAGGAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCt                                                                     <  1:225110/100‑1 (MQ=255)
                                  aaaGTGTTTTAAGAAGGAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTgc                                                                   <  1:3465318/100‑1 (MQ=255)
                                  aaaGTGTTTTAAGAAGGAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTgc                                                                   <  1:4516072/100‑1 (MQ=255)
                                  aaaGTGTTTTAAGAAGGAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTgc                                                                   >  1:2170937/1‑100 (MQ=255)
                                   aaGTGTTTTAAGAAGGAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCgg                                                                             >  2:2704458/1‑89 (MQ=255)
                                   aaGTGTTTTAAGAAGGAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCgg                                                                             <  2:904311/89‑1 (MQ=255)
                                    aGTGTTTTAAGAAGGAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGt                                                                            >  2:4857330/1‑89 (MQ=255)
                                     gtgtTTTAAGAAGGAGCCATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTg                                                                           <  2:4966125/89‑1 (MQ=255)
                                     gtgtTTTAAGAAGGAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTg                                                                           <  2:2995738/89‑1 (MQ=255)
                                       gtTTTAAGAAGGAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTaa                                                              >  1:3168054/1‑100 (MQ=255)
                                          ttAAGAAGGAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTc                                                                      >  2:2802661/1‑89 (MQ=255)
                                          ttAAGAAGGAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACg                                                           >  1:3563265/1‑100 (MQ=255)
                                            aagaagGAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACggg                                                         >  1:1815136/1‑100 (MQ=255)
                                             agaagGAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTgc                                                                   <  2:2488314/89‑1 (MQ=255)
                                              gaagGAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGa                                                       <  1:5437657/100‑1 (MQ=255)
                                               aagGAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTgcgc                                                                 <  2:4325491/89‑1 (MQ=255)
                                                agGAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACg                                                     <  1:1370862/100‑1 (MQ=255)
                                                agGAGCAATTCTATCGATTCTGATTTTGGGTAATCAAGACGGCATAGTTATGTCCCCGGAGCCTGATCAACTCCGGTGACTTCTGCGCt                                                                >  2:2130586/1‑89 (MQ=255)
                                                 ggAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTa                                                               >  2:3539428/1‑89 (MQ=255)
                                                 ggAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTa                                                               >  2:410648/1‑89 (MQ=255)
                                                 ggAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTa                                                               >  2:4528569/1‑89 (MQ=255)
                                                  gAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTaa                                                              >  2:1338987/1‑89 (MQ=255)
                                                  gAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGtt                                                   <  1:2360464/100‑1 (MQ=255)
                                                   aGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTaaa                                                             >  2:798277/1‑89 (MQ=255)
                                                   aGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGttt                                                  <  1:1001825/100‑1 (MQ=255)
                                                     cAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGATCAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTAt                                                <  1:5537431/100‑1 (MQ=255)
                                                      aaTTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACgg                                                          >  2:2351963/1‑89 (MQ=255)
                                                       aTTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACggg                                                         <  2:4202109/89‑1 (MQ=255)
                                                       aTTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATgc                                              <  1:1198807/100‑1 (MQ=255)
                                                            aTCGAGTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGcaca                                         <  1:4251423/100‑1 (MQ=255)
                                                              cGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATa                                       <  1:2537204/100‑1 (MQ=255)
                                                               gattttgattttGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTa                                                 <  2:3340864/89‑1 (MQ=255)
                                                               gattttgattttGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATAc                                      >  1:621676/1‑100 (MQ=255)
                                                                 ttttgattttgGGAACTAAACACGGCATAATTATGTCAATGGAGCCTGAACAACTACGGTGACTTCTGGGCTAAACGGGGACGTTTATg                                               >  2:3431000/1‑89 (MQ=255)
                                                                 ttttgattttgGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACaa                                    <  1:5040008/100‑1 (MQ=255)
                                                                   ttgattttgGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATgcg                                             <  2:3664356/89‑1 (MQ=255)
                                                                   ttgattttgGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATgcg                                             >  2:1917629/1‑89 (MQ=255)
                                                                   ttgattttgGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATc                                  >  1:4428271/1‑100 (MQ=255)
                                                                   ttgattttgGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATc                                  >  1:2070443/1‑100 (MQ=255)
                                                                    tgattttgGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATgcgc                                            <  2:4627644/89‑1 (MQ=255)
                                                                      attttgGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGcac                                          <  2:1708557/89‑1 (MQ=255)
                                                                       ttttgGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGcaca                                         >  2:1626189/1‑89 (MQ=255)
                                                                       ttttgGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCaaa                              >  1:4133359/1‑100 (MQ=255)
                                                                       ttttgGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCaaa                              <  1:2715891/100‑1 (MQ=255)
                                                                          tgGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAActc                           <  1:4043068/100‑1 (MQ=255)
                                                                          tgGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAActc                           <  1:3373105/100‑1 (MQ=255)
                                                                          tgGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAActc                           >  1:2796034/1‑100 (MQ=255)
                                                                           gggAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACa                                     <  2:5322694/89‑1 (MQ=255)
                                                                           gggAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACa                                     >  2:4739162/1‑89 (MQ=255)
                                                                           gggAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAActct                          <  1:4339854/100‑1 (MQ=255)
                                                                            ggAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAActctc                         >  1:4694544/1‑100 (MQ=255)
                                                                             gAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAActctct                        >  1:717853/1‑100 (MQ=255)
                                                                                aTCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCa                                <  2:1816357/89‑1 (MQ=255)
                                                                                   aaCACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAAc                             >  2:3877414/1‑89 (MQ=255)
                                                                                   aaCACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAAc                             <  2:2028988/89‑1 (MQ=255)
                                                                                       cGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTca              >  1:2448036/1‑100 (MQ=255)
                                                                                        ggCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAActctct                        >  2:2591227/1‑89 (MQ=255)
                                                                                         gCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTcaca            <  1:887759/100‑1 (MQ=255)
                                                                                         gCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTcaca            <  1:147546/100‑1 (MQ=255)
                                                                                              aTTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTccc                  >  2:1096603/1‑89 (MQ=255)
                                                                                               ttATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCt                 >  2:120461/1‑89 (MQ=255)
                                                                                                  tGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTca              >  2:3115494/1‑89 (MQ=255)
                                                                                                  tGTCACCGGAGCCTGAACAACGCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTca              <  2:3979884/89‑1 (MQ=255)
                                                                                                   gTCACCGGAGCCTGAACAACTCCTGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTcac             <  2:676962/89‑1 (MQ=255)
                                                                                                   gTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGaaa  <  1:2624534/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
CACCAAGAGAGATAAGAAAAGCTTCCAGAGAGTAAAAGTGTTTTAAGAAGGAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAA  >  NC_000913/572217‑572415

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.