New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 566777 =NA (NA)5279 (24.450) 194/184 0.0 96.8% noncoding (1/1258 nt) IS3 repeat region
?NC_000913 = 572471 175 (0.800)coding (6/456 nt) ybcN DLP12 prophage; uncharacterized protein

Only 100 of 5632 total aligned reads displayed.

GCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCCAGCCTTATCTGGAGGAGGGCAAATGCTTTCGCATGGT  >  NC_000913/572372‑572569
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 cacaTACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACt                                                                                                   <  1:2923083‑M2/100‑2 (MQ=255)
 cacaTACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACt                                                                                                   >  1:171106‑M2/1‑99 (MQ=255)
     tACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatn                                                                                               >  1:3376249‑M2/1‑95 (MQ=255)
     tACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatc                                                                                               >  1:2131716‑M2/1‑95 (MQ=255)
     tACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatc                                                                                               <  1:4444793‑M2/100‑6 (MQ=255)
        aaTCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatctta                                                                                            <  1:3641‑M2/100‑9 (MQ=255)
         aTCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttac                                                                                           <  1:5021485‑M2/100‑10 (MQ=255)
          ctcaaACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGCCCTCTGCGGAGGGGAAGCGTGAACtgatcttacc                                                                                          >  1:2833979‑M2/3‑90 (MQ=255)
           ccAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAAC                                                                                                    >  2:1815255‑M2/1‑89 (MQ=255)
           ccAAACTCTCTTCTCCCTTCACAGATGCAGAAACGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttaccc                                                                                         >  1:5298432‑M2/1‑89 (MQ=255)
            cAAACTCTCTTCTCCCTTCACAGATGCAGAAATACACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACt                                                                                                   <  2:4247231‑M2/89‑2 (MQ=255)
              aaCTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagc                                                                                      >  1:2730279‑M2/1‑86 (MQ=255)
                ctctctTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGACGGGAAGCGTGAACtgatc                                                                                               >  2:1687685‑M2/1‑84 (MQ=255)
                   tcttctCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatctta                                                                                            >  2:3801555‑M2/1‑81 (MQ=255)
                    cttctCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttac                                                                                           >  2:3918721‑M2/1‑80 (MQ=255)
                      tctcCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtgg                                                                              >  1:794427‑M2/1‑78 (MQ=255)
                      tctcCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtgg                                                                              >  1:4060651‑M2/1‑78 (MQ=255)
                        tcCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggac                                                                            >  1:5191455‑M2/1‑76 (MQ=255)
                        tcCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggac                                                                            <  1:3285819‑M2/100‑25 (MQ=255)
                         cccTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagc                                                                                      >  2:5275248‑M2/1‑75 (MQ=255)
                          ccTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagca                                                                                     >  2:3433583‑M2/1‑74 (MQ=255)
                           cTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaa                                                                                    >  2:907666‑M2/1‑73 (MQ=255)
                             tCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcg                                                                       >  1:3102830‑M2/1‑71 (MQ=255)
                             tCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcg                                                                       >  1:879484‑M2/1‑71 (MQ=255)
                              cacaGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcgg                                                                      >  1:3455964‑M2/1‑70 (MQ=255)
                               acaGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggc                                                                     >  1:1811573‑M2/1‑69 (MQ=255)
                               acaGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggc                                                                     >  1:2047615‑M2/1‑69 (MQ=255)
                               acaGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagt                                                                                >  2:4749054‑M2/1‑69 (MQ=255)
                                 aGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggcta                                                                   >  1:3558599‑M2/1‑67 (MQ=255)
                                 aGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtgg                                                                              >  2:2126299‑M2/1‑67 (MQ=255)
                                 aGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtgg                                                                              >  2:4884572‑M2/1‑67 (MQ=255)
                                  gATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaa                                                                  <  1:1322350‑M2/100‑35 (MQ=255)
                                  gATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtgga                                                                             >  2:334938‑M2/1‑66 (MQ=255)
                                   aTGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggac                                                                            >  2:582260‑M2/1‑65 (MQ=255)
                                     gCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtg                                                               >  1:2301203‑M2/1‑63 (MQ=255)
                                     gCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtg                                                               >  1:4839371‑M2/1‑63 (MQ=255)
                                     gCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacac                                                                          <  2:2727688‑M2/89‑27 (MQ=255)
                                      cAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGATGCGTGAACtgatcttacccagcaatagtggacacgcggctgagtga                                                              <  1:5516931‑M2/100‑39 (MQ=255)
                                      cAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtga                                                              <  1:70373‑M2/100‑39 (MQ=255)
                                      cAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacg                                                                         <  2:148425‑M2/89‑28 (MQ=255)
                                        gAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcg                                                                       <  2:2803319‑M2/89‑30 (MQ=255)
                                            tGCACCTGCAATTCTTTGCATCTATCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaac                                                        >  1:4728451‑M2/1‑56 (MQ=255)
                                              cACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactc                                                      >  1:2404824‑M2/1‑54 (MQ=255)
                                              cACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaag                                                                 >  2:2423819‑M2/1‑54 (MQ=255)
                                                ccTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctc                                                    <  1:2513032‑M2/100‑49 (MQ=255)
                                                ccTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtg                                                               >  2:3529737‑M2/1‑52 (MQ=255)
                                                 cTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtga                                                              <  2:2310943‑M2/89‑39 (MQ=255)
                                                 cTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagcggacacgcggctaagtgagtaaactctca                                                   >  1:5414053‑M2/1‑51 (MQ=255)
                                                  tGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcag                                                  <  1:2618024‑M2/100‑51 (MQ=255)
                                                  tGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcag                                                  >  1:4159486‑M2/1‑50 (MQ=255)
                                                  tGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcag                                                  <  1:590772‑M2/100‑51 (MQ=255)
                                                   gCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagt                                                 <  1:4358373‑M2/100‑52 (MQ=255)
                                                   gCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagt                                                            >  2:4012889‑M2/1‑49 (MQ=255)
                                                   gCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagt                                                            >  2:1264441‑M2/1‑49 (MQ=255)
                                                   gCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagt                                                            <  2:1580096‑M2/89‑41 (MQ=255)
                                                     aaTTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtca                                               <  1:1972437‑M2/100‑54 (MQ=255)
                                                      aTTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcaggcag                                              <  1:3193817‑M2/100‑55 (MQ=255)
                                                        tCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagag                                            >  1:2222153‑M2/1‑44 (MQ=255)
                                                         cTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagagg                                           >  1:1123446‑M2/1‑43 (MQ=255)
                                                          tttGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggt                                          >  1:1002033‑M2/1‑42 (MQ=255)
                                                          tttGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggt                                          >  1:1219216‑M2/1‑42 (MQ=255)
                                                           ttGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctc                                                    >  2:4972297‑M2/1‑41 (MQ=255)
                                                              cATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgact                                      <  1:5102077‑M2/100‑63 (MQ=255)
                                                               aTCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactc                                     <  1:3953749‑M2/100‑64 (MQ=255)
                                                                tCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactca                                    >  1:4629624‑M2/1‑36 (MQ=255)
                                                                tCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactca                                    >  1:1511931‑M2/1‑36 (MQ=255)
                                                                 cTAGCGTTTGACCTCTGTGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcag                                              <  2:4358802‑M2/89‑55 (MQ=255)
                                                                   aGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagag                                            <  2:5079582‑M2/89‑57 (MQ=255)
                                                                   aGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagag                                            <  2:2529743‑M2/89‑57 (MQ=255)
                                                                      gTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtg                                         >  2:5156993‑M2/1‑30 (MQ=255)
                                                                            ccTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcac                                   <  2:3259929‑M2/89‑66 (MQ=255)
                                                                            ccTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcac                                   >  2:118533‑M2/1‑24 (MQ=255)
                                                                             ctctGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaaca                       <  1:1884889‑M2/100‑78 (MQ=255)
                                                                              tctGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacat                                 <  2:5497446‑M2/89‑68 (MQ=255)
                                                                               ctGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatg                                >  2:1926299‑M2/1‑21 (MQ=255)
                                                                               ctGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatg                                >  2:4658024‑M2/1‑21 (MQ=255)
                                                                                tGCGGAGGGGAAGCGTGTACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagta                    <  1:3729701‑M2/100‑81 (MQ=255)
                                                                                tGCGGAGGGGAAGCGTGAACtgatcttacccatcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatga                               >  2:457770‑M2/1‑20 (MQ=255)
                                                                                    gAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCCAGCCTTATCTgg                           <  2:2224462/89‑1 (MQ=255)
                                                                                     aGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaa                          >  2:3012013‑M2/1‑15 (MQ=255)
                                                                                     aGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgaaaaaa                          >  2:3651772‑M2/1‑15 (MQ=255)
                                                                                      ggggAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaacc              >  1:140499‑M2/1‑14 (MQ=255)
                                                                                      ggggAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaa                         <  2:4464028‑M2/89‑76 (MQ=255)
                                                                                        ggAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCCAGCCTTATCTGGAGGAGGGCAAATGCt            >  1:3844549/1‑100 (MQ=255)
                                                                                         gAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacag                      <  2:2910928‑M2/89‑79 (MQ=255)
                                                                                         gAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacag                      <  2:539711‑M2/89‑79 (MQ=255)
                                                                                         gAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGACCCAGCCTTATCTGgaggag                      <  2:3136363/89‑1 (MQ=255)
                                                                                            gCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtat                   >  2:4125625‑M2/1‑8 (MQ=255)
                                                                                             cGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaa       <  1:4939067‑M2/100‑94 (MQ=255)
                                                                                             cGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaa       >  1:1585584‑M2/1‑7 (MQ=255)
                                                                                             cGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaa       >  1:952835‑M2/1‑7 (MQ=255)
                                                                                              gTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatca                 >  2:1362136‑M2/1‑6 (MQ=255)
                                                                                                gAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaac               >  2:202634‑M2/1‑4 (MQ=255)
                                                                                                gAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCCAGCCTTATCTGGAGGAGGGCAAATGCTTTCGCATg    >  1:3001674/1‑100 (MQ=255)
                                                                                                 aaCtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaacc   >  1:4543395‑M2/1‑3 (MQ=255)
                                                                                                 aaCtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaacc              >  2:2624255‑M2/1‑3 (MQ=255)
                                                                                                 aaCtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaacc              >  2:811319‑M2/1‑3 (MQ=255)
                                                                                                  aCtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccc  >  1:4253784‑M2/1‑2 (MQ=255)
                                                                                                  aCtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaacca             >  2:704866‑M2/1‑2 (MQ=255)
                                                                                                   ctgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccag            <  2:1064560‑M2/89‑89 (MQ=255)
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GCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCCAGCCTTATCTGGAGGAGGGCAAATGCTTTCGCATGGT  >  NC_000913/572372‑572569

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.