New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 5723255536 (25.370)92 (0.470) 50/166 7.7 1.9% intergenic (+74/‑43) ybcM/ylcH DLP12 prophage; putative DNA‑binding transcriptional regulator/uncharacterized protein, DLP12 prophage
?NC_000913 = 572334 4659 (23.920)intergenic (+83/‑34) ybcM/ylcH DLP12 prophage; putative DNA‑binding transcriptional regulator/uncharacterized protein, DLP12 prophage
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 5325 total aligned reads displayed.

AAGCTTCCAGAGAGTAAAAGTGTTTTAAGAAGGAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTG  >  NC_000913/572235‑572433
                                                                                                   |                                                                                                   
    ttCCAGAGAGTAAAAGTGTTTTAAGAAGGAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTcc                                                                                                 <  1:1741431/100‑1 (MQ=255)
      ccAGAGAGTAAAAGTGTTTTAAGAAGGAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCgg                                                                                               <  1:5481384/100‑1 (MQ=255)
      ccAGAGAGTAAAAGTGTTTTAAGAAGGAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCgg                                                                                               >  1:3382096/1‑100 (MQ=255)
       cAGAGAGTAAAAGTGTTTTAAGAAGGAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGt                                                                                              >  1:5307617/1‑100 (MQ=255)
       cAGAGAGTAAAAGTGTTTTAAGAAGGAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGt                                                                                              >  1:647295/1‑100 (MQ=255)
       cAGAGAGTAAAAGTGTTTTAAGAAGGAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGt                                                                                              <  1:1903677/100‑1 (MQ=255)
        agagagTAAAAGTGTTTTAAGAAGGAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTg                                                                                             >  1:3650673/1‑100 (MQ=255)
         gagagTAAAAGTGTTTTAAGAAGGAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGa                                                                                            >  1:1207675/1‑100 (MQ=255)
          agagTAAAAGTGTTTTAAGAAGGAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGAc                                                                                           <  1:2571521/100‑1 (MQ=255)
            agTAAAAGTGTTTTAAGAAGGAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACtt                                                                                         >  1:5379678/1‑100 (MQ=255)
             gTAAAAGTGTTTTAAGAAGGAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACt                                                                                                   <  2:5574907/89‑1 (MQ=255)
              tAAAAGTGTTTTAAGAAGGAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCt                                                                                       >  1:2813062/1‑100 (MQ=255)
               aaaaGTGTTTTAAGAAGGAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTg                                                                                      <  1:1573850/100‑1 (MQ=255)
                  aGTGTTTTAAGAAGGAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTgcgc                                                                                   <  1:847726/100‑1 (MQ=255)
                   gtgtTTTAAGAAGGAGTAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTg                                                                                             <  2:78914/89‑1 (MQ=255)
                   gtgtTTTAAGAAGGAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTg                                                                                             <  2:4258959/89‑1 (MQ=255)
                   gtgtTTTAAGAAGGAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTg                                                                                             <  2:2437001/89‑1 (MQ=255)
                     gtTTTAAGAAGGAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGAc                                                                                           >  2:3062316/1‑89 (MQ=255)
                     gtTTTAAGAAGGAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTaa                                                                                >  1:4514734/1‑100 (MQ=255)
                       tttAAGAAGGAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAAc                                                                              <  1:1826709/100‑1 (MQ=255)
                        ttAAGAAGGAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTc                                                                                        <  2:4814783/89‑1 (MQ=255)
                        ttAAGAAGGAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACg                                                                             >  1:3860635/1‑100 (MQ=255)
                         tAAGAAGGAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCt                                                                                       >  2:2542554/1‑89 (MQ=255)
                         tAAGAAGGAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACgg                                                                            >  1:127706/1‑100 (MQ=255)
                           agaagGAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACgggg                                                                          <  1:2295408/100‑1 (MQ=255)
                            gaagGAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGa                                                                         <  1:4794076/100‑1 (MQ=255)
                             aagGAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGAc                                                                        <  1:2737089/100‑1 (MQ=255)
                              agGAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCt                                                                                  >  2:5324519/1‑89 (MQ=255)
                              agGAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCt                                                                                  >  2:1283102/1‑89 (MQ=255)
                              agGAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACg                                                                       <  1:1370862/100‑1 (MQ=255)
                                gAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGtt                                                                     >  1:4605614/1‑100 (MQ=255)
                                 aGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGttt                                                                    <  1:1001825/100‑1 (MQ=255)
                                  gCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAAc                                                                              >  2:671033/1‑89 (MQ=255)
                                  gCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAAc                                                                              <  2:5007235/89‑1 (MQ=255)
                                  gCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTa                                                                   <  1:3086132/100‑1 (MQ=255)
                                   cAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACg                                                                             <  2:1151920/89‑1 (MQ=255)
                                    aaTTCTATCGATTTTGATTTTGGGAAATCAACCCGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATg                                                                 <  1:5575012/100‑1 (MQ=255)
                                    aaTTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATg                                                                 <  1:2194394/100‑1 (MQ=255)
                                     aTTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTTCGCTAAACggn                                                                           <  2:3296756/89‑2 (MQ=255)
                                        cTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGAc                                                                        >  2:4461471/1‑89 (MQ=255)
                                        cTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGAc                                                                        >  2:1596905/1‑89 (MQ=255)
                                         tATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGcac                                                            <  1:4990340/100‑1 (MQ=255)
                                            cGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCAGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATa                                                         <  1:3770120/100‑1 (MQ=255)
                                             gattttgattttGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTa                                                                   <  2:139007/89‑1 (MQ=255)
                                             gattttgattttGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATAc                                                        >  1:4130550/1‑100 (MQ=255)
                                             gattttgattttGGGAAATCAACACGGCACAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGCTTa                                                                   >  2:4363995/1‑89 (MQ=255)
                                              attttgattttgGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACa                                                       <  1:929940/100‑1 (MQ=255)
                                                 ttgattttgGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATgcg                                                               >  2:4567984/1‑89 (MQ=255)
                                                  tgattttgGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATgcgc                                                              >  2:1791118/1‑89 (MQ=255)
                                                  tgattttgGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATcc                                                   <  1:3949601/100‑1 (MQ=255)
                                                     ttttgGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGcaca                                                           <  2:1985615/89‑1 (MQ=255)
                                                      tgtgGGAAATCAACACCGCATAATTATGGCACCGGAGCCTGAACAGTTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCTCACAt                                                          <  2:2759769/87‑1 (MQ=255)
                                                       ttgGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAAct                                              >  1:4258041/1‑100 (MQ=255)
                                                        tgGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATAc                                                        <  2:1682705/89‑1 (MQ=255)
                                                         gggAAATCAACACGGCATACTTATGTCACCGGAGTGTGAACAACTCCGGTGACTTCTGCGCTAACCGGGGACGTTTCTGCGCACATACa                                                       >  2:893781/1‑89 (MQ=255)
                                                         gggAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACa                                                       <  2:1487583/89‑1 (MQ=255)
                                                         gggAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACa                                                       <  2:1887955/89‑1 (MQ=255)
                                                          ggAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACaa                                                      >  2:2309489/1‑89 (MQ=255)
                                                          ggAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAActctn                                           <  1:5181847/100‑2 (MQ=255)
                                                               tCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCaa                                                 <  2:4702724/89‑1 (MQ=255)
                                                                 aaCACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTccc                                    >  1:4355070/1‑100 (MQ=255)
                                                                   cacGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCtt                                  <  1:3573896/100‑1 (MQ=255)
                                                                    acGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTc                                 >  1:2919257/1‑100 (MQ=255)
                                                                    acGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTc                                 <  1:4048655/100‑1 (MQ=255)
                                                                     cGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTca                                <  1:2003293/100‑1 (MQ=255)
                                                                       gCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTcaca                              <  1:1133055/100‑1 (MQ=255)
                                                                       gCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTcaca                              <  1:147546/100‑1 (MQ=255)
                                                                        cATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCtcttc                                        <  2:2852207/89‑1 (MQ=255)
                                                                           aaTTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATg                          <  1:2476870/100‑1 (MQ=255)
                                                                             ttATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCt                                   <  2:3466833/89‑1 (MQ=255)
                                                                             ttATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCt                                   <  2:5213500/89‑1 (MQ=255)
                                                                               aTGTCACCGGAGCCTGAACACCTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGa                      <  1:2644953/100‑1 (MQ=255)
                                                                                tGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCtcttc                                        >  1:4885011/1‑81 (MQ=255)
                                                                                tGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTca                                <  2:1040112/89‑1 (MQ=255)
                                                                                tGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTca                                >  2:4158755/1‑89 (MQ=255)
                                                                                 gTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTcac                               <  2:5484658/89‑1 (MQ=255)
                                                                                 gTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGaaa                    <  1:2084247/100‑1 (MQ=255)
                                                                                  tCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACACTCCAAACTCTCTTCTCCCTTCACAGATGCAGAAAt                   <  1:3480104/100‑1 (MQ=255)
                                                                                  tCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTcaca                              <  2:2112158/89‑1 (MQ=255)
                                                                                   cACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATg                  >  1:5087501/1‑100 (MQ=255)
                                                                                    aCCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGa                            >  2:3180683/1‑89 (MQ=255)
                                                                                    aCCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGc                 <  1:4698848/100‑1 (MQ=255)
                                                                                    aCCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGc                 >  1:4433355/1‑100 (MQ=255)
                                                                                     ccGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGAt                           >  2:2953301/1‑89 (MQ=255)
                                                                                      cGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATg                          <  2:2205800/89‑1 (MQ=255)
                                                                                       ggAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGc                         <  2:3385037/89‑1 (MQ=255)
                                                                                       ggAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCAcc              <  1:3204466/100‑1 (MQ=255)
                                                                                       ggAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCAcc              >  1:3296358/1‑100 (MQ=255)
                                                                                         aGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACGATCCAAACTCTCTTCTCCCTTCACAGATGCAg                       <  2:266081/89‑1 (MQ=255)
                                                                                          gCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCCAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTgn           <  1:2392058/100‑2 (MQ=255)
                                                                                            cTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGaaa                    >  2:4906653/1‑89 (MQ=255)
                                                                                                 caacTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCAc               <  2:3706111/89‑1 (MQ=255)
                                                                                                 caacTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCAc               >  2:510553/1‑89 (MQ=255)
                                                                                                  aacTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCGGAAATGCACCTGCAATTCttt   <  1:3003358/100‑1 (MQ=255)
                                                                                                  aacTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCAcc              <  2:4044076/89‑1 (MQ=255)
                                                                                                  aacTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCAcc              <  2:3921827/89‑1 (MQ=255)
                                                                                                  aacTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCAcc              <  2:3810183/89‑1 (MQ=255)
                                                                                                  aacTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCAcc              <  2:3579905/89‑1 (MQ=255)
                                                                                                  aacTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCttt   <  1:1640677/100‑1 (MQ=255)
                                                                                                  aacTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCttt   >  1:75279/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
AAGCTTCCAGAGAGTAAAAGTGTTTTAAGAAGGAGCAATTCTATCGATTTTGATTTTGGGAAATCAACACGGCATAATTATGTCACCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTG  >  NC_000913/572235‑572433

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.