Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 1,293,032 IS1 (–) +8 bp intergenic (‑110/‑488) hns ← / → tdk global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 1050545NA (NA)211 (0.970) 116/186 0.2 99.0% noncoding (768/768 nt) IS1 repeat region
?NC_000913 = 1293039 2 (0.010)intergenic (‑117/‑488) hns/tdk global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase
* ? NC_000913 1293032 =2 (0.010)210 (0.960) 96/186 1.4 99.0% intergenic (‑110/‑495) hns/tdk global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase
?NC_000913 = 1979270 NA (NA)noncoding (1/768 nt) IS1 repeat region

Only 100 of 416 total aligned reads displayed.

ATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGA  >  NC_000913/1292941‑1293137
                                                                                                  |                                                                                                  
 tatTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGgg                                                                                                  <  1:1504179‑M2/100‑3 (MQ=255)
    tGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaa                                                                                               <  1:5297130‑M2/100‑6 (MQ=255)
     ggggTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaat                                                                                              >  1:4007582‑M2/1‑94 (MQ=255)
      gggTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCACTAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatg                                                                                             >  1:5526273‑M2/1‑93 (MQ=255)
      ggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCaataa                                                                                             <  1:2215923‑M1/15‑1 (MQ=255)
        gtggtTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgac                                                                                           >  1:3080280‑M2/1‑91 (MQ=255)
        agggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCaataaat                                                                                           <  1:951708‑M1/17‑1 (MQ=255)
         tggtTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCTggtaatgact                                                                                          <  1:1311076‑M2/100‑11 (MQ=255)
         gggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatccgtaagttggcagcatcaccTTGTGCCGCCaataaata                                                                                          >  1:2078234‑M1/83‑100 (MQ=255)
           gtTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactcc                                                                                        >  1:2468359‑M2/1‑88 (MQ=255)
           gacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTgccgc                                                                                                   <  2:2208504‑M1/9‑1 (MQ=255)
            tttGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGgg                                                                                                  >  2:4497283‑M2/1‑87 (MQ=255)
            acagccgatagaaacagacgctactccagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGtgccgcn                                                                                                  >  2:385607‑M1/80‑88 (MQ=255)
               gttgAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaact                                                                                    >  1:4474890‑M2/1‑84 (MQ=255)
               gctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCtttt                                                                                    <  1:1641552‑M1/24‑1 (MQ=255)
                ctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTc                                                                                   <  1:5458031‑M1/25‑1 (MQ=255)
                 tgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCa                                                                                  >  1:4526904‑M1/75‑100 (MQ=255)
                   atagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCatn                                                                                >  1:3396320‑M1/73‑99 (MQ=255)
                    ggTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgact                                                                                          <  2:1330681‑M2/89‑11 (MQ=255)
                    ggTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgact                                                                                          <  2:4403435‑M2/89‑11 (MQ=255)
                      taatagTAGAGCCTTAAATTCAGTTGTGCAATAGCGAGGAATGTAAGGAATTCAAAGTTGTTCTTTATTTTGTGCCGggtaatgactcc                                                                                        <  2:3698224‑M2/89‑13 (MQ=255)
                       aaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATACATATCTTTTCATAAAAt                                                                            >  1:3734253‑M1/69‑100 (MQ=255)
                         taataGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaac                                                                                     >  2:4891502‑M2/1‑74 (MQ=255)
                          cagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAg                                                                         <  1:4216405‑M1/35‑1 (MQ=255)
                           ataGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgt                                                                        >  1:257595‑M2/1‑72 (MQ=255)
                              agccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATa                                                                                <  2:1157775‑M1/28‑1 (MQ=255)
                                 cactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATaaaa                                                                             <  2:1963135‑M1/31‑1 (MQ=255)
                                 cactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATaaaa                                                                             <  2:3368885‑M1/31‑1 (MQ=255)
                                 cactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATaaaa                                                                             <  2:590484‑M1/31‑1 (MQ=255)
                                 cactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGaaa                                                                  <  1:1193244‑M1/42‑1 (MQ=255)
                                   ttAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatag                                                                           <  2:3085578‑M2/89‑26 (MQ=255)
                                   ctggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAg                                                                >  1:4150271‑M1/57‑100 (MQ=255)
                                       aTTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgtt                                                                       <  2:697162‑M2/89‑30 (MQ=255)
                                        gcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCa                                                                      <  2:4602050‑M1/38‑1 (MQ=255)
                                         tCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAATATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgtttt                                                                     <  2:5448107‑M2/89‑32 (MQ=255)
                                          cAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgtttta                                                                    >  2:1703416‑M2/1‑57 (MQ=255)
                                          acctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGc                                                         <  1:2524252‑M1/51‑1 (MQ=255)
                                          acctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGc                                                         >  1:657796‑M1/50‑100 (MQ=255)
                                            ctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCaataaata                                                                                          <  1:5376281‑M1/18‑1 (MQ=255)
                                            ctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGaaa                                                                  <  2:2502056‑M1/42‑1 (MQ=255)
                                            ctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGaaa                                                                  <  2:5062743‑M1/42‑1 (MQ=255)
                                            ctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGaaa                                                                  <  2:1449766‑M1/42‑1 (MQ=255)
                                             tcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGaaaa                                                                 <  2:5210476‑M1/43‑1 (MQ=255)
                                             tcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCata                                                      >  1:2879048‑M1/47‑100 (MQ=255)
                                             tcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTACCGCCAATAAATATCTTTTCATAAAATTAGCCAGaaaa                                                                 <  2:2994546‑M1/43‑1 (MQ=255)
                                              caaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAg                                                                <  2:630607‑M1/44‑1 (MQ=255)
                                              caaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAg                                                                <  2:4769369‑M1/44‑1 (MQ=255)
                                               gtgCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttc                                                               >  2:2354674‑M2/1‑52 (MQ=255)
                                                tgCAATAGCCAGTAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttca                                                              >  2:3199651‑M2/1‑51 (MQ=255)
                                                tgCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttca                                                              >  2:2711499‑M2/1‑51 (MQ=255)
                                                  cAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgat                                                 >  1:4745544‑M2/1‑49 (MQ=255)
                                                  aacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGcc                                                 >  1:1713942‑M1/42‑100 (MQ=255)
                                                   aaTAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatg                                                >  1:1018026‑M2/1‑48 (MQ=255)
                                                    aTAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatga                                               >  1:3473893‑M2/1‑47 (MQ=255)
                                                    aTAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagata                                                          <  2:782699‑M2/89‑43 (MQ=255)
                                                    aTAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagata                                                          >  2:1912255‑M2/1‑47 (MQ=255)
                                                     tAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataa                                                         <  2:1245588‑M2/89‑44 (MQ=255)
                                                      aGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataat                                                        >  2:4122169‑M2/1‑45 (MQ=255)
                                                         cAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttg                                          <  1:806679‑M2/100‑59 (MQ=255)
                                                           ggAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtc                                        >  1:5336029‑M2/1‑40 (MQ=255)
                                                           ggAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccg                                                   <  2:3520438‑M2/89‑50 (MQ=255)
                                                           atacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTaca                                        >  1:3911921‑M1/33‑100 (MQ=255)
                                                            tacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGc                                                  <  2:1053477‑M1/58‑1 (MQ=255)
                                                            tacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGc                                                  >  2:5479806‑M1/32‑89 (MQ=255)
                                                             acactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGcc                                                 <  2:4714732‑M1/59‑1 (MQ=255)
                                                              cactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGc                                                         <  2:3733507‑M1/51‑1 (MQ=255)
                                                                 tAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgact                                             <  2:4642677‑M2/89‑56 (MQ=255)
                                                                    ggAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttg                                          >  2:5347529‑M2/1‑31 (MQ=255)
                                                                       aTTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccac                            >  1:3186958‑M2/1‑28 (MQ=255)
                                                                       aTTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtca                                       >  2:2916934‑M2/1‑28 (MQ=255)
                                                                         tCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccg                          <  1:49770‑M2/100‑75 (MQ=255)
                                                                         tCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatg                                     >  2:1496725‑M2/1‑26 (MQ=255)
                                                                          cAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccga                         <  1:5086129‑M2/100‑76 (MQ=255)
                                                                          aagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCgcag                         >  1:706080‑M1/18‑100 (MQ=255)
                                                                            gttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCgatg                                  <  2:2298019‑M1/74‑1 (MQ=255)
                                                                            aaaTTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgatt                       <  1:5024396‑M2/100‑78 (MQ=255)
                                                                            aaaTTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcag                                  <  2:867767‑M2/89‑67 (MQ=255)
                                                                              tggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCgatgat                                <  2:2561909‑M1/76‑1 (MQ=255)
                                                                               ttGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctc                               >  2:4155619‑M2/1‑20 (MQ=255)
                                                                               ggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGAtt                               <  2:3948882‑M1/77‑1 (MQ=255)
                                                                                gcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGAttt                              >  2:136305‑M1/12‑89 (MQ=255)
                                                                                 gTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgag                  <  1:2147904‑M2/100‑83 (MQ=255)
                                                                                  agcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAg                 >  1:5623‑M1/10‑100 (MQ=255)
                                                                                  agcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAg                 >  1:857300‑M1/10‑100 (MQ=255)
                                                                                   tCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaa                >  1:3027446‑M2/1‑16 (MQ=255)
                                                                                    catcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCgca                          >  2:2103696‑M1/8‑89 (MQ=255)
                                                                                     tttATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacn              >  1:1398922‑M2/1‑14 (MQ=255)
                                                                                     tttATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacg              <  1:4389770‑M2/100‑87 (MQ=255)
                                                                                     atcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGtt              <  1:1775889‑M1/94‑1 (MQ=255)
                                                                                      tcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTa             <  1:3654033‑M1/95‑1 (MQ=255)
                                                                                       tATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgatt                       >  2:5557781‑M2/1‑12 (MQ=255)
                                                                                          cTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAAc         >  1:4837553‑M1/2‑100 (MQ=255)
                                                                                           ttGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcg        >  1:2014472‑M2/1‑8 (MQ=255)
                                                                                             gtgCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgaga                 >  2:4233439‑M2/1‑6 (MQ=255)
                                                                                              tgCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTcc     <  1:3815700/100‑1 (MQ=255)
                                                                                              tgCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTcc     >  1:4899788/1‑100 (MQ=255)
                                                                                                ccgccAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGtt              >  2:4676396/1‑89 (MQ=255)
                                                                                                ccGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacg              >  2:4292869‑M2/1‑3 (MQ=255)
                                                                                                 cgccAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGa  >  1:2361751/1‑100 (MQ=255)
                                                                                                  gggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgac            <  2:218010‑M2/89‑89 (MQ=255)
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ATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGA  >  NC_000913/1292941‑1293137

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.