| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1168581 | 57 (1.030) | 6 (0.120) | 6/240 | 6.2 | 10.8% | intergenic (+98/+155) | eda/leuA | KHG/KDPG aldolase/2‑isopropylmalate synthase |
| ? | NC_002947 | = 1168654 | 50 (1.040) | intergenic (+171/+82) | eda/leuA | KHG/KDPG aldolase/2‑isopropylmalate synthase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GGTGACTGGGCGCGGATCGAAGCGTGCAGTGCCGAGGCGATGGCACTGCTGGACGCCAACTGAAAACAGTTGTGTGCTTTACGGCTTGTGGGGCGCTTGGTCGGCGCCCCTTTTTTTTGCCTGGGGTATTTGCAGTGGTTGTGCTGGCCCTTTCGCGGGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1168421‑1168581‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggccctttcgcgggtaAACCCGCTCCTACTACGGCCTGTGTCCAACACCCGGTGTGTGCCCACCGCAGATCGGTGCGTAGGAGCGGGTCTACCCGCGAAAGGGCCAGCACAACCACTGCAAATACCCCAGGCAAAAAAAAGGGGCGCCGACCAAGCGCCCCA < NC_002947/1168654‑1168509 GGTGACTGGGCGCGGATCGAAGCGTGCAGTGCCGAGGCGATGGCACTGCTGGACGCCAACTGAAAACAGTTGTGTGCTTTACGGCTTGTGGGGCGCTTGGTCGGCGCCCCTTTTTTTTGCCTGGGGTATTTGCAGTGGTTGTGCTGGCC > 1:360241/1‑149 TGGGCGCGGATCGAAGCGTGCAGTGCCGAGGCGATGGCACTGCTGGACGCCAACTGAAAACAGTTGTGTGCTTTACGGCTTGTGGGGCGCTTGGTCGGCGCCCCTTTTTTTTGCCTGGGGTATTTGCAGTGGTTGTGCTGGCCCTTTCG > 7:142662/1‑149 CGCGTATCTAAGCGTGCAGTGCCGTGGCGATGGCAGTGCTGGACGCCAACTGAAAACAGTTGTGTGCTTTTCGGCTTGTGGGGCGCTTGGTCGGCGCCCCTTTTTTTTGCCTGGGGTATTTGCAGTGGTTGTGCTGGCCCTTTCGCGGG < 5:334427/149‑1 GCGGATCGAAGCGTGCAGTGCCGAGGCGATGGCACTGCTGGACGCCAACTGAAAACAGTTGTGTGCTTTACGGCTTGTGGGGCGCTTGGTCGGCGCCCCTTTTTTTTGCCTGGGGTATTTGCAGTGGTTGTGCTGGCCCTTTCGCGGGT > 7:196716/1‑149 AAGCGTGCAGTGCCGAGGCGATGGCACTGCTGGACGCCAACTGAAAACAGTTGTGTGCTTTACGGCTTGTGGGGCGCTTGGTCGGCGCCCCTTTTTTTTGCCTGGGGTATTTGCAGTGGTTGTGCTGGCCCTTTCGCGG > 2:190988/1‑139 AAGCGTGCAGTGCCGAGGCGATGGCACTGCTGGACGCCAACTGAAAACAGTTGTGTGCTTTACGGCTTGTGGGGCGCTTGGTCGGCGCCCCTTTTTTTTGCCTGGGGTATTTGCAGTGGTTGTGCTGGCCCTTTCGCGG < 1:190988/139‑1 AGGCGATGGCACTGCTGGACGCCAACTGAAAACAGTTGTGTGCTTTACGGCTTGTGGGGCGCTTGGTCGGCGCCCCTTTTTTTTGCCTGGGGTATTTGCAGTGGTTGTGCTGGCCCTTTCGCGGGTAAACCCGCTCCTACTACGGCCTG > 1:45430/1‑149 GATGGCACTGCTGGACGCCAACTGAAAACAGTTGTGTGCTTTACGGCTTGTGGGGCGCTTGGTCGGCGCCCCTTTTTTTTGCCTGGGGTATTTGCAGTGGTTGTGCTGGCCCTTTCGCGGGTAAACCCGCTCCTACTACGGCCTGTGTC > 4:126993/1‑149 CAACTGAAAACAGTTGTGTGCTTTACGGCTTGTGGGGCGCTTGGTCGGCGCCCCTTTTTTTTGCCTGGGGTATTTGCAGTGGTTGTGCTGGCCCTTTCGCGGGTAAACCCGCTCCTACTACGGCCTGTGTCCAACACCCGGTGTGTGCC < 2:45430/149‑1 CGGCTTGTGGGGCGCTTGGTCGGCGCCCCTTTTTTTTGCCTGGGGTATTTGCAGTGGTTGTGCTGGCCCTTTCGCGGGTAAACCCGCTCCTACTACGGCCTGTGTCCAACACCCGGTGTGTGCCCACCGCAGATCGGTGCGTAGGAGCG < 3:126993/149‑1 CTTGTGGGGCGCTTGGTCGGCGCCCCTTTTTTTTGCCTGGGGTATTTGCAGTGGTTGTGCTGGCCCTTTCGCGGGTAAACCCGCTCCTACTACGGCCTGTGTCCAACACCCGGTGTGTGCCCACCGCAGATCGGTGCGT > 5:262676/1‑139 CTTGTGGGGCGCTTGGTCGGCGCCCCTTTTTTTTGCCTGGGGTATTTGCAGTGGTTGTGCTGGCCCTTTCGCGGGTAAACCCGCTCCTACTACGGCCTGTGTCCAACACCCGGTGTGTGCCCACCGCAGATCGGTGCGT < 6:262676/139‑1 TGGCCCTTTCGCGGGTAAACCCGCTCCTACTACGGCCTGTGTCCAACACCCGGTGTGTGCCCACCGCAGATCGGTGCGTAGGAGCGGGTCTACCCGCGAAAGGGCCCGCCCAACCACTGCAAATACCCCAGGCAAAAAAAAGGGGCGCC > 7:118891/1‑149 CTTTCGCGGGTAAACCCGCTCCTACTACGGCCTGTGTCCAACACCCGGTGTGTGCCCACCGCAGATCGGTGCGTAGGAGCGGGTCTACCCGCGAAAGGGCCAGCACAACCACTGCAAATACCCCA > 3:49826/1‑125 CTTTCGCGGGTAAACCCGCTCCTACTACGGCCTGTGTCCAACACCCGGTGTGTGCCCACCGCAGATCGGTGCGTAGGAGCGGGTCTACCCGCGAAAGGGCCAGCACAACCACTGCAAATACCCCA < 4:49826/125‑1 CGGGTAAACCCGCTCCTACTACGGCCTGTGTCCAACACCCGGTGTGTGCCCACCGCAGATCGGTGCGTAGGAGCGGGTCTACCCGCGAAAGGGCCAGCACAACCACTGCAAATACCCCAGGCAAAAAAAAGGGGTGCCGACCAAGCGCC > 7:273856/1‑149 CGGGTAAACCCGCTCCTACTACGGCCTGTGTCCAACACCCGGTGTGTGCCCACCGCAGATCGGTGCGTAGGAGCGGGTCTACCCGCGAAAGGGCCAGCACAACCACTGCAAATACCCCAGGCAAAAAAAAGGGGCGCCGACCAAGCGCC > 3:152261/1‑149 GTAAACCCGCTCCAACTACGGCCTGTGTCCAACAACCGGTGTGTGCCCACCGCAGATCGGTGCGTAGGAGCGGGTCTACCCGCGAAAGGGCCAGCACAACCACTGCAAATACCCCAGGCAAAAAAAAGGGGCGCCGCCCAAGCGCCCCA > 6:156013/1‑149 AAACCCGCTCCTACTACGGCCTGTGTCCAACACCCGGTGTGTGCCCACCG > 6:121129/1‑50 AAACCCGCTCCTACTACGGCCTGTGTCCAACACCCGGTGTGTGCCCACCG < 5:121129/50‑1 GGTGACTGGGCGCGGATCGAAGCGTGCAGTGCCGAGGCGATGGCACTGCTGGACGCCAACTGAAAACAGTTGTGTGCTTTACGGCTTGTGGGGCGCTTGGTCGGCGCCCCTTTTTTTTGCCTGGGGTATTTGCAGTGGTTGTGCTGGCCCTTTCGCGGGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1168421‑1168581‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggccctttcgcgggtaAACCCGCTCCTACTACGGCCTGTGTCCAACACCCGGTGTGTGCCCACCGCAGATCGGTGCGTAGGAGCGGGTCTACCCGCGAAAGGGCCAGCACAACCACTGCAAATACCCCAGGCAAAAAAAAGGGGCGCCGACCAAGCGCCCCA < NC_002947/1168654‑1168509 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |