| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2301453 = | 0 (0.000) | 74 (1.360) | 46/270 | 0.3 | 100% | intergenic (‑97/‑234) | sbcD/PP_5497 | exonuclease subunit SbcD/rhs repeat‑associated core domain‑containing protein |
| ? | NC_002947 | 2925429 = | NA (NA) | intergenic (‑177/+388) | PP_2563/PP_2564 | antibiotic biosynthesis protein/quercetin 2,3‑dioxygenase | |||||
TGGCTGGTAGCACAACGCTAGTGCAGGCTGGCTGATGGCGCCAATATTTGAAGGCTGCCTTGCGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTT‑CCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTGCTATGGTTCCC > NC_002947/2925284‑2925570 | tggctggTAGCACAACGCTAGTGCAGGCTGGCTGATGGCGCCAATATTTGAAGGCTGCCTTGCGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCa > 6:88807/1‑149 (MQ=255) ctggTAGCACAACGCTAGTGCAGGCTGGCTGATGGCGCCAATATTTGAAGGCTGCCTTGCGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCAccc > 7:230675/1‑149 (MQ=255) gTGCAGGCTGGCTGATGGCGCCAATATTTGAAGGCTGCCTTGCGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTT‑CCGGGCTg < 5:88807/147‑1 (MQ=255) ctgATGGCGCCAATATTTGAAGGCTGCCTTGCGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTT‑CCGGGCTGCGCTGTCGCACAg < 2:245881/149‑1 (MQ=255) gcCAATATTTGAAGGCTGCCTTGCGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGgaga < 4:73388/107‑1 (MQ=255) gcCAATATTTGAAGGCTGCCTTGCGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGgaga > 3:73388/1‑107 (MQ=255) gcCAATATTTGAAGGCTGCCTTGCGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTT‑CCGGGCTGCGCTGTCGCACAGCAAACAg > 2:137303/1‑148 (MQ=255) cAATATTTGAAGGCTGCCTTGCGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTT‑CCGGGCTGCGCTGTCGCACAGCAAACAGGAt > 6:183790/1‑149 (MQ=255) cAATATTTGAAGGCTGCCTTGCGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGACCACATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTT‑ACGGGCTGCGCTGTCGCACAGCAAACAgg > 6:165846/1‑147 (MQ=255) ttGAAGGCTGCCTTGCGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTT‑CCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCAt > 3:197111/1‑149 (MQ=255) gAAGGCTGCCTTGCGATAGCCGGGCAGGTACAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTAAGCGGTTGTTCAATGGGAGATCACCCAGCCATT‑CCGGCCTGCGCTGTCGCACAGCAAACAGGATGCGCATGa > 2:92181/1‑149 (MQ=38) aaGGCTGCCTTGCGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTT‑CCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGAc < 7:41754/149‑1 (MQ=255) cTGCCTTGCGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTT‑CCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGt > 4:247062/1‑147 (MQ=255) ccTTGCGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTT‑CCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGAt < 4:197111/149‑1 (MQ=255) cTTGCGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTT‑CCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGa > 4:199579/1‑140 (MQ=255) cTTGCGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTT‑CCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGa < 3:199579/140‑1 (MQ=255) tGCGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTT‑CCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTg > 1:223373/1‑149 (MQ=255) tGCGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTT‑ACGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTg > 1:198955/1‑149 (MQ=255) gATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTTCCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCa < 1:92181/149‑1 (MQ=255) gATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTT‑CCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCAc > 2:69393/1‑149 (MQ=255) gCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAg > 7:203886/1‑82 (MQ=255) gCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTT‑CCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCga < 5:196274/149‑1 (MQ=255) ggTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTT‑CCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGAt < 5:275068/149‑1 (MQ=255) tCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTT‑CCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATc > 5:71001/1‑148 (MQ=255) cAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTT‑CCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAg < 1:137303/149‑1 (MQ=255) ggCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTT‑CCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGaa > 7:298063/1‑148 (MQ=255) aaGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTT‑CCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCAtt < 2:223373/149‑1 (MQ=255) gCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTT‑CCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCg > 7:85396/1‑149 (MQ=255) ccATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTT‑CCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGa > 4:21326/1‑149 (MQ=255) aCCCTGCTAACCGGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTT‑CCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGt < 6:71001/149‑1 (MQ=255) ccTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTT‑CCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAg > 5:381772/1‑149 (MQ=255) ccgCTAACCCGTCGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTT‑CCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAgg > 2:228940/3‑149 (MQ=255) cTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTT‑CCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAgg > 4:367919/1‑149 (MQ=255) aaCCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTT‑CCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAgc > 5:77638/1‑149 (MQ=255) ccGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTT‑CCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAgccgc > 3:308518/1‑149 (MQ=255) ggTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTT‑CCGGGCTGCGCTGTCGCACAGCAAACAGGATgcgc < 2:125654/72‑1 (MQ=255) gTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTT‑CCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATAc > 1:279163/1‑149 (MQ=255) tAGCGGTTGTTCCATGGGAGATCACCCAGCCCTT‑CCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACtt > 5:285273/1‑149 (MQ=255) gCGGTTGTTCCATGGGAGATCACCCAGCCCTT‑CCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGGCAGCCGCCGAATACTTTg < 3:21326/149‑1 (MQ=255) cGGTTGTTCCATGGGAGATCACCCAGCCCTT‑CCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCg > 4:266861/1‑92 (MQ=255) cGGTTGTTCCATGGGAGATCACCCAGCCCTT‑CCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCg < 3:266861/92‑1 (MQ=255) cGGTTGTTCAATGGGAGATCACCCAGCCCTT‑CCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTg < 5:165846/148‑1 (MQ=37) gttgttCCATGGGAGATCACCCAGCCCTT‑CCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGAt < 2:52981/118‑1 (MQ=40) gttgttCCATGGGAGATCACCCAGCCCTT‑CCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGAt > 1:52981/1‑118 (MQ=40) ttgttCCATGGGAGATCACCCAGCCCTT‑CCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTGCTAt < 6:77638/149‑1 (MQ=37) ttCCATGGGAGATCACCCAGCCCTT‑CCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTGCTATGGt > 2:176992/1‑149 (MQ=35) ccATGGGAGATCACCCAGCCCTT‑CCGGGCTGAGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACCTCGAGATCTAGAAAAGCATTCGCCGACTGATCAGGGTAGGTCAGCCGCCGAATACTTTGCTATGGTTc > 2:243369/1‑149 (MQ=16) cATGGGAGATCACCCAGCCCTT‑CCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTGCTATGGTTcc < 5:183790/149‑1 (MQ=32) cATGGGAGATCACCCAGCCCTT‑CCGGGCTGCGCTGGCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTGCTATGGTTcc < 7:167457/149‑1 (MQ=17) aTGGGAGATCACCCAGCCCTT‑CCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTGCTATGGTTccc < 1:228940/149‑1 (MQ=32) aTGGGAGATCACCCAGCCCTT‑CCGGGCTGCGCTGTAGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTGCTATGGTTcc > 5:217179/1‑148 (MQ=17) | TGGCTGGTAGCACAACGCTAGTGCAGGCTGGCTGATGGCGCCAATATTTGAAGGCTGCCTTGCGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTT‑CCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTGCTATGGTTCCC > NC_002947/2925284‑2925570 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |