| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,327,121 | 0 | C | T | 55.8% | 3.3 / 102.0 | 87 | intergenic (+97/‑196) | PP_16SE/PP_23SE | 16S ribosomal RNA/23S ribosomal RNA |
| Reads supporting (aligned to +/- strand): ref base C (20/18); new base T (28/20); total (48/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.65e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: E-value score below prediction cutoff. | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
TCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATCACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGCATCGAATGT‑‑TGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCAGTTTCACTGCTGGTGGATCAGGCTAAGG > NC_002947/1326977‑1327226 | tCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATCACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGCATCg < 3:297552/149‑1 (MQ=32) gTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATCACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGCATCGaa > 5:151023/1‑149 (MQ=32) tAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATCACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAAt > 6:242450/1‑149 (MQ=17) aaCAAGGTAGCCGTAGGGGAACCTGCGGCTGGATCACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGaa > 4:194912/1‑147 (MQ=17) aaCAAGGTAGCCGTAGGGGAACCTGCGGCTGGATCACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGaa < 3:194912/147‑1 (MQ=17) aaCAAGGTAGCCGTAGGGGAACCTGCGGCTGGATCACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATg > 2:114438/1‑149 (MQ=17) aCAAGGTAGCCGTAGGGGAACCTGCGGCTGGATCACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGCATCGAATg < 1:187447/148‑1 (MQ=32) aCAAGGTAGCCGTAGGGGAACCTGCGGCTGGATCACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGCATCGAATGt < 6:319382/149‑1 (MQ=32) cAAGGTAGCCGTAGGGGAACCTGCGGCTGGATCTCCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGt‑‑t < 1:155049/149‑1 (MQ=17) aaGGTAGCCGTAGGGGAACCTGCGGCTGGATCACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGATGCGAATgctc < 5:198242/149‑4 (MQ=255) cGTAGGGGAACCTGCGGCTGGATCACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGT‑‑TGATTTCTgg > 5:46381/1‑149 (MQ=17) cGTAGGGGAACCTGCGGCTGGATCACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGCATCGAATGT‑‑TGATTTCTgg < 1:58765/149‑1 (MQ=32) gTAGGGGAACCTGCGGCTGGATCACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGT‑‑TGATTTCTGGc > 3:36326/1‑149 (MQ=17) gTAGGGGAACCTGCGGCTGGATCACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGCATCGAATGT‑‑TGATTTCTGGc > 2:69635/1‑149 (MQ=32) gggAACCTGCGTCTGGATCACCTCCTTAATCGACTACATCAGCCTGCTGATTAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGCATCGAATGT‑‑TGATTTCTGGCtttt < 5:64539/149‑1 (MQ=12) aTCACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGCATCGAATGT‑‑TGATTTCTGGCTTTTGTCAGATCGTTCTTTa < 7:73815/149‑1 (MQ=32) tCACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGt‑‑t > 7:369546/1‑118 (MQ=17) cACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGT‑‑TGATTTCTGGCTTTTGt < 5:66811/133‑1 (MQ=17) cACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGT‑‑TGATTTCTGGCTTTTGt > 6:66811/1‑133 (MQ=17) cACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGCATCGAATGT‑‑TGATTTCTGGCTTTTGTCAGATCGTTCTTTaa > 7:230060/1‑148 (MQ=32) ctcctTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGT‑‑TGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAAt > 2:315500/1‑149 (MQ=17) ctTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGCATCGAATGT‑‑TGATTTCTGGCTTTTGt < 7:221729/127‑1 (MQ=32) tCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGCATCGAATGT‑‑TGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGatat < 6:151023/149‑1 (MQ=32) gagctcATCAGCAGGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGT‑‑TGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATAtgt > 4:20288/6‑149 (MQ=255) gacgacATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGT‑‑TGATTTCTGGCtttt < 7:116837/118‑1 (MQ=17) gacgacATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGT‑‑TGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATAtgt > 3:49408/1‑149 (MQ=17) gacgacATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGT‑‑TGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATAtg < 6:46381/148‑1 (MQ=17) gacgacATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGCATCGAATGT‑‑TGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATAtg < 2:8521/148‑1 (MQ=32) gaagacATCAGCCTGCTGATGAGCTACCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGT‑‑TGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATAtg < 2:290705/145‑1 (MQ=12) cgacATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGCATCGAATGT‑‑TGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTga < 2:123715/149‑1 (MQ=32) gacATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGT‑‑TGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTgat < 4:49408/149‑1 (MQ=17) gacATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGCATCGAATGT‑‑TGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTga > 7:239521/1‑148 (MQ=32) acATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGT‑‑TGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTgata < 5:242450/149‑1 (MQ=17) aTCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGCATCGAATGT‑‑TGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGat < 6:295971/139‑1 (MQ=32) aTCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGCATCGAATGT‑‑TGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGat > 5:295971/1‑139 (MQ=32) tCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGCATCGAATGT‑‑TGATTTCTGGCTTTTGt < 6:350725/113‑1 (MQ=32) tCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGCATCGAATGT‑‑TGATTTCTGGCTTTTGt > 5:350725/1‑113 (MQ=32) cAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGATTGT‑‑TGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGat < 1:136331/137‑1 (MQ=17) cAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAGTGT‑‑TGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGat > 2:136331/1‑137 (MQ=17) cAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGCATCGAATGT‑‑TGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTgatagata > 5:84295/1‑149 (MQ=32) aGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGT‑‑TGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCg > 1:188050/1‑133 (MQ=17) aGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGT‑‑TGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCg < 2:188050/133‑1 (MQ=17) aGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGCATCGAATGT‑‑TGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGatat < 2:91302/149‑1 (MQ=32) gCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGCATCGAATGT‑‑TGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGAtata < 7:261384/149‑1 (MQ=32) ctgctgATGAGCTTCCAGACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTTGTCAGAACCTGGTAATGAGCATTCGTATCGAATGT‑‑TGATTTCTGGCTTTTGTCTGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGa < 4:134541/149‑1 (MQ=11) tgctgATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGCATCGAATGT‑‑TGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGa < 7:82928/131‑1 (MQ=32) tgatgaGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGCATCGAATGT‑‑TGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGAtata > 7:53353/1‑143 (MQ=32) atgaGCTCCCACACGAATTGCTTGATTCATTGACGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCGTTCGTATCGAATGT‑‑TGAATTCTGGCTTTTGTAAGATCGTTCTTTAAAAATTCGGATATGTgatagat > 7:333794/1‑138 (MQ=11) gaGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGT‑‑TGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTgatagat < 4:303726/136‑1 (MQ=17) gaGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGT‑‑TGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTgatagat > 3:303726/1‑136 (MQ=17) gaGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGT‑‑TGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGAtata > 4:193085/1‑139 (MQ=17) gaGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGT‑‑TGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGAtata < 3:193085/139‑1 (MQ=17) gaGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGT‑‑TGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGAc > 3:14245/1‑142 (MQ=17) gaGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGT‑‑TGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGAc < 4:14245/142‑1 (MQ=17) gaGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGT‑‑TGATTTATGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTTAaca > 7:184034/1‑148 (MQ=12) gaGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGATCAGAACCTGGAAATGAGCATTCGTATCGAATGT‑‑TGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAacac > 4:197684/1‑149 (MQ=17) aGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGT‑‑TGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACAcc < 2:156533/149‑1 (MQ=17) tCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTACTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGT‑‑TGATTTCTGGCTTTTGTCAGATAGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCAGt > 5:157402/1‑149 (MQ=12) ccACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCTCATCGAATGT‑‑TGATTTCTGGCTTTTGTCAGa < 1:222311/98‑1 (MQ=18) ccACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGCATCGAATGT‑‑TGATTTCTGGCTTTTGTCAGa > 2:222311/1‑98 (MQ=33) acacGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGT‑‑TGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTga > 7:3471/1‑123 (MQ=17) acacGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGT‑‑TGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCAGTTTCa > 7:31425/1‑149 (MQ=17) acacGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGCATCGAATGT‑‑TGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCTGATATGTGATAGATATAGACTGAACACCAGTTTc > 5:105422/1‑148 (MQ=17) acacGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGCATCGAATGT‑‑TGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCAGTTTCa > 2:291973/1‑149 (MQ=32) cacGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGCATCGAATGT‑‑TGATTAATGGATTTTGTCAGATCGTTCTTTAAAAATTCGTTTATGAGATAGAATTATAATGAACACCAGttaaa > 4:334573/1‑145 (MQ=11) cGAATTGCTTGATTCATTGTCGAAGACGATTTTCCTGGTCAGAACCTGGAAATGAGCATTCGCATCGAATGT‑‑TGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCAGTTTCActg > 1:207652/1‑149 (MQ=17) aTTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGT‑‑TGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATAtgt < 2:57127/115‑1 (MQ=17) aTTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGT‑‑TGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATAagt > 1:57127/1‑115 (MQ=12) cTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGT‑‑TGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATAtgt < 2:278667/111‑1 (MQ=17) cTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGT‑‑TGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATAtgt > 1:278667/1‑111 (MQ=17) cTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGT‑‑TGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCAGTTTCACTGCtggtgg < 5:188816/149‑1 (MQ=17) ttGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGTAGGGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCAGTTTCACTGCtggtg > 1:298506/1‑149 (MQ=11) ttGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGT‑‑TGATTTCTGGCTTTTGt > 6:97184/1‑81 (MQ=18) ttGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGT‑‑TGATTTCTGGCTTTTGt < 5:97184/81‑1 (MQ=18) ttGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGCATCGAATGT‑‑TGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCAGTTTCACTGCTGGTGGa > 6:85247/1‑149 (MQ=32) gATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGCATCGAATGT‑‑TGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCAGTTTCACTGCTGGTGGAt > 6:205473/1‑148 (MQ=32) aTTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGCATCGAATGT‑‑TGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATAtg < 4:333033/106‑1 (MQ=32) aTTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGCATCGAATGT‑‑TGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATAtg > 3:333033/1‑106 (MQ=32) aTTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGCATCGAATGT‑‑TGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCAGTTTCACTGCTGGTGGAt > 7:218272/1‑147 (MQ=32) ttCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGCATCGAATGT‑‑TGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCAGt < 5:80376/130‑1 (MQ=32) ttCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGCATCGAATGT‑‑TGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCAGt > 6:80376/1‑130 (MQ=32) aTTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGT‑‑TGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCa < 5:97254/125‑1 (MQ=17) aTTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGT‑‑TGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCa > 6:97254/1‑125 (MQ=17) ttGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGT‑‑TGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCAGTTTCACTGCTGGTGGATCAGGCt > 1:26398/1‑148 (MQ=17) ttGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGCATCGAATGT‑‑TGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCAGTTTCACTGCTGGTGGATCAGGCt > 5:185031/1‑148 (MQ=32) tCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGT‑‑TGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCAGTTTCACTGCTGGTGGATCAGGCTAAgg > 2:198505/1‑149 (MQ=17) cGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGCATCGAATGT‑‑TGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCAGTTTCACTGCTGGTGGATCAGGCTAAgg > 2:243233/1‑148 (MQ=31) | TCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATCACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGCATCGAATGT‑‑TGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCAGTTTCACTGCTGGTGGATCAGGCTAAGG > NC_002947/1326977‑1327226 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |