| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_002947 | 278,744 | +A | intergenic (‑239/+75) | PP_0224 ← / ← sctC | DszC family monooxygenase/sulfur compound ABC transporter ATP‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 278,742 | 1 | . | A | 92.9% | 217.3 / 9.6 | 70 | intergenic (‑237/+77) | PP_0224/sctC | DszC family monooxygenase/sulfur compound ABC transporter ATP‑binding protein |
| Reads supporting (aligned to +/- strand): ref base . (1/4); new base A (33/32); total (34/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.58e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
ATGTCGCTACAGCTGATCGCGACAGACGTGTGCTGGTCC‑GGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAA‑GGGGGATTTGTTACAGAGGTGCCGGGCTCT‑TCGCGGGT‑AA‑CC‑CGCTCCTACACACATGCCTCAAGATCTGTGCAC‑TGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCCGCGTACGCTCTTC > NC_002947/278595‑278875 | aTGTCGCTACAGCTGATCGCGACAGACGTGTGCTGGTCC‑GGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAA‑GGGGGATTTGTTACAGAGGTGCCGGGCTCT‑TCGCGGGt > 3:281175/1‑148 (MQ=255)aTGTCGCTACAGCTGATCGCGACAGACGTGTGCTGGTCC‑GGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAA‑GGGGGATTTGTTACAGAGGTGCCGGGCTCT‑TCGCGGGt > 2:162271/1‑148 (MQ=255) cGCTACAGCTGATCGCGACAGACGTGTGCTGGTCC‑GGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAA‑GGGGGATTTGTTACAGAGGTGCCGGGCTCT‑TCGCGGGT‑aaac < 4:281175/148‑3 (MQ=255) cAGCTGATCGCGACAGACGTGTGCTGGTCC‑GGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAA‑GGGGGATTTGTTACAGAGGTGCCGGGCTCT‑TCGCGGGTAAA‑CC‑CGCTc < 1:162271/149‑1 (MQ=255) aGCTGATCGCGACAGACGTGTGCTGGTCC‑GGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAA‑GGGGGATTTGTTACAGAGGTGCCGGGCTCT‑TCGCGGGTAAA‑CC‑CGCTcc < 6:242194/149‑1 (MQ=255) aGCTGATCGCGACAGACGTGTGCTGGTCC‑GGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAA‑GGGGGATTTGTTACAGAGGTGCCGGGCTCT‑TCGCGGGTAAA‑CC‑CGCTcc > 1:72208/1‑149 (MQ=255) aGCTGATCGCGACAGACGTGTGCTGGTCC‑GGTGGTACGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAA‑GGGGGATTTGTTACAGAGGTGCCGGGCTCT‑TCGCGGGTAAA‑CC‑CGCTcc > 1:65894/1‑149 (MQ=255) cTGATCGCGACAGACGTGTGCTGGTCC‑GGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAA‑GGGGGATTTGTTACAGAGGTGCCGGGCTCT‑TCGCGGGTAAA‑CC‑CGCTCCTa < 8:140709/149‑1 (MQ=255) cTGATCGCGACAGACGTGTGCTGGTCC‑GGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAA‑GGGGGATTTGTTACAGAGGTGCCGGGCTCT‑TCGCGGGTAAA‑CC‑CGCTCCTa > 6:27048/1‑149 (MQ=255) tGATCGCGACAGACGTGTGCTGGTCCGGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAA‑GGGGGATTTGTTACAGAGGTGCCGGGCTCT‑TCGCGGGTAAA‑CC‑CGCTCCt > 1:228744/1‑148 (MQ=255) aTCGCGACAGACGTGTGCTGGTCC‑GGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAA‑GGGGGATTTGTTACAGAGGTGCCGGGCTCT‑TCGCGGGTAAA‑CC‑CGCTCCTacac < 1:326713/149‑1 (MQ=255) aTCGCGACAGACGTGTGCTGGTCC‑GGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAA‑GGGGGATTTGTTACAGAGGTGCCGGGCTCT‑TCGCGGGTAAA‑CC‑CGCTCCTaca > 6:62959/1‑148 (MQ=255) tCGCGACAGACGTGTGCTGGTCC‑GGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAA‑GGGGGATTTGTTACAGAGGTGCCGGGCTCT‑TCGCGGGTAAA‑CC‑CGCTCCTacaca < 2:145611/149‑1 (MQ=255) gcgACAGACGTGTGCTGGTCC‑GGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAA‑GGGGGATTTGTTACAGAGGTGCCGGGCTCT‑TCGCGGGTAAA‑CC‑CGCTCCTAcacaca > 7:199622/1‑149 (MQ=255) gcgACAGACGTGTGCTGGTCC‑GGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAA‑GGGGGATTTGTTACAGAGGTGCCGGGCTCT‑TCGCGGGT‑AA‑ac‑cc > 2:379358/1‑135 (MQ=255) gcgACAGACGTGTGCTGGTCC‑GGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAA‑GGGGGATTTGTTACAGAGGTGCCGGGCTCT‑TCGCGGGT‑AA‑ac‑cc < 1:379358/136‑2 (MQ=255) aCAGACGTGTGCTGGTCC‑GGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAA‑GGGGGATTTGTTACAGAGGTGCCGGGCTCT‑TCGCGGGTAAA‑CC‑CGCTCCTACACACATGc < 5:62959/149‑1 (MQ=255) gagtcGTGTGCTTGTCC‑GGTGGTCCGGTATATATAGCCTTATGATTTATAAAATTTTTTTGAACTAAGTTTTTGGAATTTTTATAGAA‑GGGTGATTTGTTACAGAGGTGCCTGGCTGT‑TCGCGGGTAAA‑CC‑CGCTCGTACAGACATGc < 2:956/144‑1 (MQ=255) aCGTGTGCTGGTCC‑GGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAA‑GGGGGATTTGTTACAGAGGTGCCGGGCTCT‑TCGCGGGTAAA‑CC‑CGCTCCTACACACATGCCTc > 5:384271/1‑148 (MQ=255) cGTGTGCTGGTCC‑TGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAA‑GGGGGATTTGTTACAGAGGTGCCGGGCTCT‑TCGCGGGTAAA‑CC‑CGCTCCTACACACATGCCTCa < 2:220505/148‑1 (MQ=255) gtgtGCTGGTCC‑GGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAA‑GGGGGATTTGTTACAGAGGTGCCGGGCTCT‑TCGCGGGTAAA‑CC‑CGCTCCTACACACATGCCTCAAg < 5:27048/149‑1 (MQ=255) gCTGGTCC‑GGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAA‑GGGGGATTTGTTACAGAGGTGCCGGGCTCT‑TCGCGGGTAAA‑CC‑CGCTCCTACACACATGc < 3:425968/139‑1 (MQ=255) gCTGGTCC‑GGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAA‑GGGGGATTTGTTACAGAGGTGCCGGGCTCT‑TCGCGGGTAAA‑CC‑CGCTCCTACACACATGc > 4:425968/1‑139 (MQ=255) ggtcc‑ggtggtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAA‑GGGGGATTTGTTACAGAGGTGCCGGGCTCT‑TCGCGGGTAAA‑AC‑CGCTACTACACACATGCCTCAAGATCtgt > 5:190177/1‑148 (MQ=255) gtcc‑ggtggtcctgtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAA‑GGGGGATTTGTTACAGAGGTGCCGGGCTCT‑TCGCGGGTAAA‑CC‑CGCTCCTACACACATGCCTCAAGATCtgt < 2:119829/147‑1 (MQ=255) gtcc‑ggtggtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAA‑GGGGGATTTGTTACAGAGGTGCCGGGCTCT‑TCGCGGGTAAA‑CC‑CGCTCCTACACACATGCCTCAAGATCtgtg < 6:384271/148‑1 (MQ=255) cc‑ggtggtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAA‑GGGGGATTTGTTACAGAGGTGCCGGGCTCT‑TCGCGGGTAAA‑AC‑CGCTCCTAAACACATGCCTCAAGATCTGTGCa > 4:213135/1‑148 (MQ=255) gtggtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAA‑GGGGGATTTGTTACAGAGGTGCCGGGCTCT‑TCGCGGGTAAA‑CC‑CGCTCCTACACACATGCCTCAAGATCTGTGCAC‑Tg > 6:29749/1‑148 (MQ=255) ggtccggtATATATACCCTAATGATTTATAAAATTTTTATGTACTAACTTTTTGGAATATTTATAGAA‑GGGGGATTTGTTACAGAGGTGCCGGGCTCT‑TCGCGGGTAAA‑CC‑CGCTCCTACACACATGCCTCAAGATCTGTGCAC‑TGTAg > 2:360008/1‑149 (MQ=255) gtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAA‑GGGGGATTTGTTACAGAGGTGCCGGGCTCT‑TCGCGGGTAAA‑CC‑CGCTCCTACACACATGCCTCAAGATCTGTGCAC‑TGTAg < 4:56010/148‑1 (MQ=255) gtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAA‑GGGGGATTTGTTACAGAGGTGCCGGGCTCT‑TCGCGGGTAAA‑CC‑CGCTCCTACACACATGCCTCAAGATCTGTGCAC‑TGTAg < 6:61148/148‑1 (MQ=255) gtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAA‑GGGGGATTTGTTACAGAGGTGCCGGGCTCT‑TCGCGGGTAAA‑CC‑CGCTCCTACACACATGCCTCAAGATCTGTGCAC‑TGTAg < 1:196737/148‑1 (MQ=255) tccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAA‑GGGGGATTTGTTACAGAGGTGCCGGGCTCT‑TCGCGGGTAAA‑CC‑CGCTCCTACACACATGCCTCAAGATCTGTGCAC‑TGTAg > 6:414826/1‑147 (MQ=255) cggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAA‑GGGGGATTTGTTACAGAGGTGCCGGGCTCT‑TCGCGGGTAAA‑CC‑CGCTGCTACACACATGCCTCAAGATCTGTGGAC‑TGTAGGAGc > 4:294496/1‑149 (MQ=255) cggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAA‑GGGGGATTTGTTACAGAGGTGCCGGGCTCT‑TCGCGGGTAAA‑CC‑CGCTCCTACACACATGCCTCAAGATCTGTGCAC‑TGTAGGAGc < 5:29749/149‑1 (MQ=255) atataCCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAA‑GGGGGATTTGTTACAGAGGTGCCGGGCTCT‑TCGCGGGTAAA‑CC‑CGCTCCTACACACATGcc < 1:377150/119‑1 (MQ=255) atataCCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAA‑GGGGGATTTGTTACAGAGGTGCCGGGCTCT‑TCGCGGGTAAA‑CC‑CGCTCCTACACACATGcc > 2:377150/1‑119 (MQ=255) ataCCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAA‑GGGGGATTTGTTACAGAGGTGCCGGGCTCT‑TCGCGGGTAAA‑CC‑CGCTCCTACACACATGCCTCAAGATCTGTGCAC‑TGTAGGAGCgg < 1:39605/143‑1 (MQ=255) ataCCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAA‑GGGGGATTTGTTACAGAGGTGCCGGGCTCT‑TCGCGGGTAAA‑CC‑CGCTCCTACACACATGCCTCAAGATCTGTGCAC‑TGTAGGAGCgg > 2:39605/1‑143 (MQ=255) cccTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAA‑GGGGGATTTGTTACAGAGGTGCCGGGCTCT‑TCGCGGGTAAA‑CC‑CGCTCCTACACACATGCCTCAAGATCTGTGCAC‑TGTAGGAGCGGGTTTAccc < 8:199622/148‑1 (MQ=255) cTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAA‑GGGGGATTTGTTACAGAGGTGCCGGGCTCT‑TCGCGGGTAAA‑AC‑AGCTACTTCACAAATTCCTAAAGATCTTTGGAA‑TGTATTAGCGGGTTTTCCcgc > 5:406096/1‑148 (MQ=255) tAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAA‑GGGGGATTTGTTACAGAGGTGCCGGGCTCT‑TCGCGGGTAAA‑CC‑CGCTCCTACACACATGCCTCa < 6:193156/114‑1 (MQ=255) tAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAA‑GGGGGATTTGTTACAGAGGTGCCGGGCTCT‑TCGCGGGTAAA‑CC‑CGCTCCTACACACATGCCTCa > 5:193156/1‑114 (MQ=255) tAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAA‑GGGGGATTTGTTAAAGAGGTGCCGGGATCT‑TCGCCGGTAAA‑CC‑CGCTCCTACACACATGCCTCAAGATCTGTGCAC‑TGTAGGACAGGGTTTACCcgcg > 4:327069/1‑148 (MQ=255) ataAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAA‑GGGGGATTTGTTACAGAGGTGCCGGGCTCT‑TCGCGGGTAAA‑CC‑CGCTCCTACACACATGCCTCAAGATCTGTGCAC‑TGTAGGAGCGGGTTTACCCGCGAAAGGGCCg < 5:414826/148‑1 (MQ=255) taAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAA‑GGGGGATTTGTTACAGAGGTGCCGGGCTCT‑TCGCGGGTAAA‑CC‑AGCTACTACACACATGACACAAGTTCTGTGAAA‑GTTAGGAGAGGGTTTAACCGCGAAAGGTCCgg > 5:12233/1‑148 (MQ=255) aaaTTTTTATGAACTAACTTTTTGGAATATTTATAGAA‑GGGGGATTTGTTACAGAGGTGCCGGGCTCT‑TCGCGGGTAAA‑CC‑CGCTCCTACACACATGCCTCAAGATCTGTGCAC‑TGTAGGAg < 7:271592/122‑1 (MQ=255) aaaTTTTTATGAACTAACTTTTTGGAATATTTATAGAA‑GGGGGATTTGTTACAGAGGTGCCGGGCTCT‑TCGCGGGTAAA‑CC‑CGCTCCTACACACATGCCTCAAGATCTGTGCAC‑TGTAGGAg > 8:271592/1‑122 (MQ=255) aaaTTTTTATGAACTAACTTTTTGGAATATTTATAGAA‑GGGGGATTTGTTACAGAGGTGCCGGGCTCT‑TCGCGGGTAAA‑CC‑CGCTCCTACACACATGCCTCAAGATCTGTGCAC‑TGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAAc < 2:72208/149‑1 (MQ=255) aaaTTTTTATGAACTAACTTTTTGGAATATTTATAGAA‑GGGGGATTTGTTACAGAGGTGCCGGGCTCT‑TCGCGGGTAAA‑CC‑CGCTCCAACACACATGCCTCAAGATCTGTGCAC‑TGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAAc < 2:65894/149‑1 (MQ=255) ttaactaactTTTTGTAATATTTATAGAA‑GGGGGATTTGTTACAGAGGTGCCGGGCTCT‑TCGCGGGT‑AACCC‑CGCTCCTACACACATGCCTCAATATCTGTCCAC‑TGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACt < 4:231319/147‑1 (MQ=39) taactTTTTGGAATATTTATAGAAGGGGGGATTTGTTACAGAGGTGCCGGGCTCT‑TCGCGGGTAAA‑CC‑CGCTCCTACACACATGCCTCAAGATCTGTGCAC‑TGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACa > 1:5902/1‑137 (MQ=255) actTTTTGGAATATTTATAGAA‑GGGGGATTTGTTACAGAGGTGCCGGGCTCT‑TCGCGGGTAAA‑CC‑CGCTCCTACACACATGCCTCAAGATCTGTGCAC‑TGTAGGAGCGGGTTTACCCGCGAAAGGGc > 7:283253/1‑127 (MQ=255) ctTTTTGGAATATTTATACAA‑GGGGGATTTGTTACAGAGGTGCCGGGCTCTCTCATGGGT‑AA‑CCTCGCTCCTACACACATGCCTCAAGATCTGTGCAC‑TGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGc < 1:360008/149‑1 (MQ=38) ttttGGAATATTTATAGAA‑GGGGGATTTGTTACAGAGGTGCCGGGCTCT‑TCGCGGGTAAA‑AC‑CGCTGCTACAAAAATGCCTCAAGATGTGTGCAC‑TGTAGGAGCGGGTTTACCCGCGAAAGGGGCGGAACAGGTTTTCTCTGAGGcag > 3:404133/1‑146 (MQ=255) tGGAATATTTATAGAA‑GGGGGATTTGTTACAGAGGTGCCGGGCTCT‑TCGAGGGTAAA‑AC‑CGCTCCTACACACATGACTCAAGATCTGTGCAA‑TGTAGGAGCGGGTTTACCCGCGAAACGGCCGGAACAGGTTTACTCGGAGGCCGCAGt > 1:322917/1‑149 (MQ=255) ggAATATTTATAGAA‑GGGGGATTTGTTACAGAGGTGCCGGGCTCT‑TCGCGGGTAAA‑CC‑CGCTCCTACACACATGCCTCAAGATGTGTGCAC‑TGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTc > 6:21949/1‑149 (MQ=255) gAATATTTATATAA‑TGGGGATTTGTTTCATTGGTGACGGGATCT‑TCTTGTTTAAA‑CC‑CCCTCATAAAAAAATGACTAAAGATCTTTTAAC‑TGTATGAGCGGTTTTAACCGCGAAAGGGACGTAACAGGTTTACTCGGAGGCCGCAGTc < 6:233451/148‑1 (MQ=255) gAATATTTATAGAA‑GGGGGATTTGTTACAGAGGTGCCGGGCTCT‑TCGCGGGTAAA‑CC‑CGCTCCTACACACATGCCTCAAGATCTGTGCAC‑TGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTcc > 7:12176/1‑149 (MQ=255) tttATTGAT‑GGGGTATTTTTTACAGCGGTGCCGGGCTCT‑TCGCGGGTAAA‑CC‑CGCTCCTACACACATGCCTCAATTTCTGTGCAC‑TGTTGGAGGGGTTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAg < 2:228744/148‑1 (MQ=37) ataGAA‑GGGGGATTTGTTACAGAGGTGCCGGGCTCT‑TCGCGGGTAAA‑CC‑CGCTCCTACACACATGCCTCAAGATCTGTGCAC‑TGTAGGACCGGGTTTACCCGCGAAAGGGCCGGACGAGGTTTACTCGGAGGCCGCAGTCCCGAGGAAc > 7:233524/1‑149 (MQ=255) aGAA‑GGGGGATTTGTTACAGAGGTGCCGGGCTCT‑TCGCGGGTAAA‑CC‑CGCTCCTACACACATGCCTCAAGATCTGTGCAC‑TGTa < 3:131413/84‑1 (MQ=255) aGAA‑GGGGGATTTGTTACAGAGGTGCCGGGCTCT‑TCGCGGGTAAA‑CC‑CGCTCCTACACACATGCCTCAAGATCTGTGCAC‑TGTa > 4:131413/1‑84 (MQ=255) caa‑GGGGTATTTTTTCCAGAGGTGCCGGGCTCT‑GCGCGGGA‑AACCC‑CGCTCCAACACACATGCCTCAAGATCTGTCCAC‑TGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTg < 3:213135/148‑1 (MQ=38) gtaTTTGTTACAGAGGTGCCGGGCTCT‑TCGCGGGTAAA‑CC‑CGCTCCTACAAACATGCCTCAATATATGTGCAC‑TGTAGGTGTGGTTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAg < 4:404133/147‑1 (MQ=255) ggATTTGTTACAGAGGTGCCGGGCTCT‑TCGCGGGTAAA‑CC‑CGCTCCTACACACATGCCTCAAGATCTGTGCAC‑TGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTgcgc > 1:72366/1‑146 (MQ=255) tcaaagacGGGCTCT‑TCGCGCGTAAA‑CC‑CGCTCCTACACACATGCCTCAAGATCTGTGCAC‑TGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCCGCGt < 4:67318/141‑1 (MQ=39) gTGCGGGGCTCT‑TCGCGGGTAAA‑CC‑CGCTCCAACAAACATGCCTCAAGATCTGTGCAC‑TGTAGGAGCGGTTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCCGCGTACg < 6:406096/148‑1 (MQ=255) gTGCCGGGCTCT‑TCGCGGGTAAA‑CC‑CGCTCCTACACACATGCCTCAAGATCTGTGCACGGGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCCGCGTACg > 1:125424/1‑149 (MQ=39) gTGACGGGCTCT‑TCGCGGGTAAA‑CC‑CGCTCCTACACACATGCCTCAAGATCTGTGCAC‑TGTAGGAGAGGGTTTAACCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCCAGGAACTTGCGCAACAACTGCCGCGTACGc > 2:294805/1‑149 (MQ=255) gggCTCT‑TCGCGGGTAAA‑CC‑CGCTCCTACACACATGCCTCAAGATCTGTGCAC‑TGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCCGCGTACGCTcttc < 8:12176/149‑1 (MQ=255) ggCTCT‑TCGCGGGTAAA‑CC‑CGCTCCTACACACATGCCTCAAGATCTGTGCAC‑TGTAGGCGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGa < 1:375750/100‑1 (MQ=255) ggCTCT‑TCGCGGGTAAA‑CC‑CGCTCCTACACACATGCCTCAAGATCTGTGCAC‑TGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGa > 2:375750/1‑100 (MQ=255) | ATGTCGCTACAGCTGATCGCGACAGACGTGTGCTGGTCC‑GGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAA‑GGGGGATTTGTTACAGAGGTGCCGGGCTCT‑TCGCGGGT‑AA‑CC‑CGCTCCTACACACATGCCTCAAGATCTGTGCAC‑TGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCCGCGTACGCTCTTC > NC_002947/278595‑278875 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |