Predicted mutation | ||||||
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evidence | seq id | position | mutation | annotation | gene | description |
RA | NC_002947 | 4,586,035 | +G | intergenic (+118/+97) | PP_4061 → / ← PP_4063 | hypothetical protein/long‑chain fatty acid‑‑CoA ligase |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 4,586,033 | 1 | . | G | 100.0% | 76.7 / NA | 25 | intergenic (+116/+99) | PP_4061/PP_4063 | hypothetical protein/long‑chain fatty acid‑‑CoA ligase |
Reads supporting (aligned to +/- strand): ref base . (0/0); new base G (10/15); total (10/15) |
GCCGAGCCAGGAGCCACCGGTGAAGGCTTAAGGGTAGACCACGGCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTCTGC‑GGTAAACCCGCTCCTACCA‑GGGA‑C‑GTGCC‑G‑GCCTTGAA‑TG‑CGGCGCTGCCCCTGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCGCGCCAGCACATCAACCCG > NC_002947/4585887‑4586139 | gccgAGCCAGGAGCCACCGGTGAAGGCTTAAGGGTAGACCACGGCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGC‑gg < 8:29881/149‑1 (MQ=255) gccgAGCCAGGAGCCACCGGTGAAGGCTTAAGGGTAGACCACGGCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGC‑gg < 8:184467/149‑1 (MQ=255) cGGTGAAGGCTTAAGGGTAGACCACGGCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGATAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTAcc < 2:64282/149‑1 (MQ=255) ttAAGGGTAGACCACGGCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCA‑ggggcagcg > 3:434254/1‑143 (MQ=38) ggTAGACCACGGCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTcc < 1:406076/130‑1 (MQ=255) ggTAGACCACGGCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTcc > 2:406076/1‑130 (MQ=255) gACCACGGCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTTGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCA‑GGGACC‑GTGCC‑G‑GCCtt < 8:182651/148‑1 (MQ=38) cACGGCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCA‑GGGACC‑GTGCC‑G‑GCCTTGAA‑t > 6:146117/1‑149 (MQ=39) aCAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCA‑GGGACC‑GTGCC‑G‑GCCTTGAA‑TG‑CGGCGCTGCCCCTgg < 7:132655/149‑1 (MQ=39) aTCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCA‑GGGACC‑GTGCC‑G‑GCCTTGAA‑TG‑CGGCGCTGCCCCTGGTAGGa < 2:301549/147‑1 (MQ=39) tGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCATGGCGGGTAAAACCCCAACAAACA‑GGGACC‑CTGCC‑C‑GCCAAGGA‑AC‑CGGCGCAGCCCCAGGGAGGCGCggg > 6:239176/1‑149 (MQ=255) gcgcTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCA‑GGGACC‑GTGCC‑G‑GCCTTGAA‑TG‑CGGCGCTGCCCCTGGTAGGAGCggg > 8:157958/1‑148 (MQ=38) gcgcTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCA‑GGGACC‑GTGCC‑G‑GCCTTGAA‑TG‑CGGCGCTGCCCCTGGTAGGAGCggg < 7:157958/148‑1 (MQ=38) cgcTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCA‑GGGG‑CAGCGCC‑‑‑GCATTCAA‑GGCCGGCACGGTCCCTGGTAGGAGCGGGt < 4:434254/148‑1 (MQ=14) ctCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCA‑GGGACC‑GTGCC‑G‑GCCTTGAACTG‑CGGCGCTGCCCCTGGTAGGAGCGGGTTTAc < 1:52811/148‑1 (MQ=37) cATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCA‑GGGACC‑GTGCC‑G‑GCCTTGAA‑TG‑CGGCGCTGCCCCTGGTAGGAGCGGGTTTACCcgcg < 5:146117/149‑1 (MQ=38) ttGAAAGGTTGAGGATGACCGGTTGCTTGGCAAGGTGAAGATCTTGCATGGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCA‑GGGACC‑GTGCC‑G‑GCCTTGAA‑TG‑CGGCGCTGCCCCTGGTAGGAGCGGGTTTACCCGCGaa < 8:302248/149‑1 (MQ=37) gAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTAc > 6:159663/1‑86 (MQ=37) gAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTAc < 5:159663/86‑1 (MQ=37) aaaGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCA‑GGGACC‑GTGCC‑G‑GCCTTGAA‑TG‑CGGCGCGGCCCCTGGTAGGAGCGGGTTTACCCGCGAaga < 5:305045/148‑1 (MQ=37) gATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCA‑GGGACC‑GTGCC‑G‑GCCTTGAA‑TG‑CGGCGCTGCCCCTGGTAGGAGCggg > 6:362630/1‑124 (MQ=37) gATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCA‑GGGACC‑GTGCC‑G‑GCCTTGAA‑TG‑CGGCGCTGCCCCTGGTAGGAGCggg < 5:362630/124‑1 (MQ=37) cggggTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCA‑ggg < 6:108448/73‑1 (MQ=21) ccGGGTCCTTGGCAAGGTGAAGATCTTGCATTCATCGCGCCGGCCTCTACGCGGGTAAACCCGCTCCTACCA‑ggg > 5:108448/1‑75 (MQ=18) gAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTTAAACCCCGCCGACCACGGGC‑CGGGGCCTGTGCCGTGAA‑TG‑CGGCGCTGCCCCGGGTAGGAGCGGGTTTACCCGCGAAGCGGCCGGCCGCGCCAGCACATCAACCCg > 1:350018/1‑145 (MQ=16) aTCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCA‑GGGACC‑GTGCC‑G‑GCCTTGAA‑TG‑CGGCGCTGc > 2:429073/1‑70 (MQ=17) aTCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCA‑GGGACC‑GTGCC‑G‑GCCTTGAA‑TG‑CGGCGCTGc < 1:429073/70‑1 (MQ=17) | GCCGAGCCAGGAGCCACCGGTGAAGGCTTAAGGGTAGACCACGGCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTCTGC‑GGTAAACCCGCTCCTACCA‑GGGA‑C‑GTGCC‑G‑GCCTTGAA‑TG‑CGGCGCTGCCCCTGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCGCGCCAGCACATCAACCCG > NC_002947/4585887‑4586139 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |