Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_002947	336,125	+T	coding (210/237 nt)	PP_0278 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	336,124	1	.	T	100.0%	279.0 / NA	82	D70V (GAT→GTT)	PP_0278	hypothetical protein
Reads supporting (aligned to +/- strand):  ref base . (0/0);  new base T (42/40);  total (42/40)

GTTAACCCATCCCTCAATCTCCTACGCGTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGAC‑GACCATAAATTCCTGGGGGCAGCCGA‑TACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATT  >  NC_002947/335976‑336267                                                                                                                                                       |                                                                                                                                                gTTAACCCATCCCTCAATCTCCTACGCGTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGAC‑GACCATAAATTCCTGGGGGCAGCCGa                                                                                                                                                  >  6:155530/1‑149 (MQ=255)    aaCCCATCCCTCAATCTCCTACGCGTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGAC‑GACCATAAATTCCTGGGGGCAGCCGA‑tt                                                                                                                                               <  2:296878/148‑2 (MQ=255)      cccATCCCTCAATCTCCTACGCGTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGAC‑GACCATAAATTCCTGGGGGCAGCCGA‑ttacc                                                                                                                                            >  5:272208/1‑145 (MQ=255)      cccATCCCTCAATCTCCTACGCGTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGAC‑GACCATAAATTCCTGGGGGCAGCCGA‑ttacc                                                                                                                                            <  5:214814/149‑5 (MQ=255)      cccATCCCTCAATCTCCTACGCGTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGAC‑GACCATAAATTCCTGGGGGCAGCCGA‑ttacc                                                                                                                                            >  5:194556/1‑145 (MQ=255)          tCCCTCAATCTCCTACGCGTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGAC‑GACCATAAATTCCTGGGGGCAGCCGATTACCtgtg                                                                                                                                         <  1:262019/149‑1 (MQ=255)             cTCAATCTCCTACGCGTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGAC‑GACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGa                                                                                                                                      >  7:167937/1‑149 (MQ=255)             cTCAATCTCCTACGCGTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGAC‑GACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGa                                                                                                                                      >  1:28905/1‑149 (MQ=255)                    tcCTACGCGTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGAC‑GACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGa                                                                                                                                      <  1:196521/142‑1 (MQ=255)                    tcCTACGCGTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGAC‑GACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGa                                                                                                                                      >  2:196521/1‑142 (MQ=255)                     ccTACGCGTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGAC‑GACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGcc                                                                                                                               >  6:350832/1‑148 (MQ=255)                      cTACGCGTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGAC‑GACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGcc                                                                                                                               >  3:13525/1‑147 (MQ=255)                      cTACGCGTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGAC‑GACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGcc                                                                                                                               >  2:61847/1‑147 (MQ=255)                            gTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGAC‑GACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCt                                                                                                                       <  1:61847/149‑1 (MQ=255)                                agCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGAC‑GACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCtgat                                                                                                                    <  7:86654/148‑1 (MQ=255)                                  cccGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGAC‑GACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGaa                                                                                                                 <  1:394577/149‑1 (MQ=255)                                  cccGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGAC‑GACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGaa                                                                                                                 >  1:309791/1‑149 (MQ=255)                                  cccGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGAC‑GACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGaa                                                                                                                 <  2:28905/149‑1 (MQ=255)                                  cccGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGAC‑GACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGaa                                                                                                                 <  8:234402/149‑1 (MQ=255)                                   ccGTCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGAC‑GACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAAc                                                                                                                <  5:350832/149‑1 (MQ=255)                                   ccGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGAC‑GACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAAc                                                                                                                <  5:155530/149‑1 (MQ=255)                                    cGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGAC‑GACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAAc                                                                                                                >  7:160711/1‑148 (MQ=255)                                    cGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGAC‑GACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAAc                                                                                                                >  3:173771/1‑148 (MQ=255)                                    cGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGAC‑GACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACg                                                                                                               <  8:168660/149‑1 (MQ=255)                                          ccccGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGAC‑GACCATAAATTCCTGGGGGCAGCCGATTACCtgtg                                                                                                                                         <  6:205515/117‑1 (MQ=255)                                          ccccGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGAC‑GACCATAAATTCCTGGGGGCAGCCGATTACCtgtg                                                                                                                                         >  5:205515/1‑117 (MQ=255)                                           cccGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGAC‑GACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCga                                                                                                        <  3:401465/149‑1 (MQ=255)                                            ccGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGAC‑GACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGatat                                                                                                           <  7:196566/145‑1 (MQ=255)                                            ccGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGAC‑GACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGatat                                                                                                           >  8:196566/1‑145 (MQ=255)                                            ccGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGAC‑GACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATc                                                                                                          >  1:362062/1‑146 (MQ=255)                                               tCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGAC‑GACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATc                                                                                                    <  8:167937/149‑1 (MQ=255)                                                    gcgGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGAC‑GACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCaa                                                                                               <  4:67015/149‑1 (MQ=255)                                                         cTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGAC‑GACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGt                                                                                           >  2:95158/1‑148 (MQ=255)                                                             gAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGAC‑GACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGgc                                                                                      >  4:215856/1‑149 (MQ=255)                                                                cATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGAC‑GACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCa                                                                                   <  6:194556/149‑1 (MQ=255)                                                                        gATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGAC‑GACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCAt                                                                           >  1:263576/1‑149 (MQ=255)                                                                         aTCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGAC‑GACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCAtt                                                                          >  5:342323/1‑149 (MQ=255)                                                                          tCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGAC‑GACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTg                                                                         <  5:52222/149‑1 (MQ=255)                                                                            cTGATGGGCTACATCAAGCACCTGGTTCGCGAGGGCGATATGGAGTAC‑GAGCATAAATTCCTGGGGGCAGCCGATTAGCTGTGCGACATGCCGAAGTCGCTGATGAACGATATCGAGATCTCCATGGGTAAGGCGCATTAGGCATTGa                                                                        <  6:255377/148‑1 (MQ=255)                                                                             tGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGAC‑GACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCAttaggt                                                                      >  1:237577/1‑145 (MQ=255)                                                                             tGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGAC‑GACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCAt                                                                           <  2:237577/144‑1 (MQ=255)                                                                             tGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGAC‑GACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGAcg                                                                      >  7:314829/1‑149 (MQ=255)                                                                             tGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGAC‑GACCATAAATACCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAACGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGAGCATTa                                                                                >  7:150375/1‑139 (MQ=255)                                                                              gATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGAC‑GACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCa                                                                                   <  5:157517/135‑1 (MQ=255)                                                                              gATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGAC‑GACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCa                                                                                   >  6:157517/1‑135 (MQ=255)                                                                                  ggCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGAC‑GACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTc                                                                 <  3:369733/149‑1 (MQ=255)                                                                                   gCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGAC‑GACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCa                                                                >  8:290349/1‑149 (MQ=255)                                                                                       cATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGAC‑GACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAgg                                                                                                                           <  1:265555/86‑1 (MQ=255)                                                                                       cATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGAC‑GACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAgg                                                                                                                           >  2:265555/1‑86 (MQ=255)                                                                                       cATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGAC‑GACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGTTAAGGCGCATTAGGCATTGACGCGGTCATTtg                                                            >  7:132308/1‑149 (MQ=255)                                                                                       cATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGAC‑GACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTtg                                                            >  8:308172/1‑149 (MQ=255)                                                                                        aTCAAGCACCTGGTGCGCGAGGGCGATATGGAGGAC‑GACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAgg                                                                              <  6:399813/130‑1 (MQ=255)                                                                                        aTCAAGCACCTGGTGCGCGAGGGCGATATGGAGGAC‑GACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTtgt                                                           >  8:335377/1‑149 (MQ=255)                                                                                           aaGCACCTGGTGCGCGAGGGCGATATGGAGGAC‑GACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACTTGGCCAAGGCGCTGATAAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTgg                                                         >  1:128151/1‑148 (MQ=255)                                                                                           aaGCACCTGGTGCGCGAGGGCGATATGGAGGAC‑GACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTgg                                                         >  3:47719/1‑148 (MQ=255)                                                                                              cACCTGGTGCGCGAGGGCGATATGGAGGACGGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGACCGATATCGAGATCGCAAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAg                                                      >  1:244520/1‑149 (MQ=255)                                                                                               aCCTGGTGCGCGAGGGCGATATGGAGGAC‑GACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAAc                                                                                                                >  3:384262/1‑89 (MQ=255)                                                                                               aCCTGGTGCGCGAGGGCGATATGGAGGAC‑GACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAAc                                                                                                                <  4:384262/89‑1 (MQ=255)                                                                                               aCCTGGTGCGCGAGGGCGATATGGAGGAC‑GACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCg                                                    >  5:259853/1‑149 (MQ=255)                                                                                                 cTGGTGCGCGAGGGCGATATGGAGGAC‑GACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGc                                                  <  2:263576/149‑1 (MQ=255)                                                                                                  tGGTGCGCGAGGGCGATATGGAGGAC‑GACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGcc                                                 >  3:55704/1‑149 (MQ=255)                                                                                                   ggTGCGCGAGGGCGATATGGAGGAC‑GACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCt                                                >  7:385801/1‑149 (MQ=255)                                                                                                     tGCGCGAGGGCGATATGGAGGAC‑GACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTg                                              >  7:120932/1‑149 (MQ=255)                                                                                                         cgAGGGCGATATGGAGGAC‑GACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTc                                          <  6:272208/149‑1 (MQ=255)                                                                                                         cgAGGGCGATATGGAGGAC‑GACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTc                                          <  3:311306/149‑1 (MQ=255)                                                                                                          gAGGGCGATATGGAGGAC‑GACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTcg                                         >  5:207860/1‑149 (MQ=255)                                                                                                          gAGGGCGATATGGAGGAC‑GACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTcg                                         <  2:244520/149‑1 (MQ=255)                                                                                                               cGATATGGAGGAC‑GACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAAt                                    <  2:341732/149‑1 (MQ=255)                                                                                                                gATATGGAGGAC‑GACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATg                                   >  8:208391/1‑149 (MQ=255)                                                                                                                gATATGGAGGAC‑GACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATg                                   >  8:202561/1‑149 (MQ=255)                                                                                                                gATATGGAGGAC‑GACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATg                                   <  8:385801/149‑1 (MQ=255)                                                                                                                 atatGGAGGAC‑GACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATgg                                  <  7:290349/149‑1 (MQ=255)                                                                                                                      gaggaC‑GACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTg                              >  2:388449/1‑148 (MQ=255)                                                                                                                         gac‑gacCATAAATTCCTGGGGGCAGACGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCaaa                          <  8:160711/149‑1 (MQ=255)                                                                                                                          ac‑gacCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAag                         <  8:314829/149‑1 (MQ=255)                                                                                                                          ac‑gacCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAag                         <  1:388449/149‑1 (MQ=255)                                                                                                                               ccATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAagcagc                     >  2:345704/1‑149 (MQ=255)                                                                                                                               ccATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAagcagc                     >  3:397091/1‑149 (MQ=255)                                                                                                                                     aTTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCTTTGCAGcccattc               <  8:120932/149‑5 (MQ=39)                                                                                                                                     aTTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAAGGGGCTGCTTTGCAGcccattc               <  6:63228/149‑5 (MQ=255)                                                                                                                                           gggggCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGAttt          >  8:278237/1‑148 (MQ=255)                                                                                                                                            ggggCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCa        <  4:55704/149‑1 (MQ=255)                                                                                                                                              ggCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCTGGCGATTTCaga      <  6:342323/149‑1 (MQ=255)                                                                                                                                              ggCAGCCGATTACCTGTGCGAAATGGCCTTGGGGCTGATTAACGATATCGAGATCGCCATTGGTATGGCGTATTAGGCTTTGTCGGGGTGATTTGTGGTAGCGGCCTTGCTTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCaga      <  6:259853/149‑1 (MQ=255)                                                                                                                                               gCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATggg                                 <  7:204619/121‑1 (MQ=255)                                                                                                                                               gCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATggg                                 >  8:204619/1‑121 (MQ=255)                                                                                                                                                  gCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTATGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGAtt  >  8:179233/1‑149 (MQ=255)                                                                                                                                                       |                                                                                                                                                GTTAACCCATCCCTCAATCTCCTACGCGTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGAC‑GACCATAAATTCCTGGGGGCAGCCGA‑TACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATT  >  NC_002947/335976‑336267

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑