| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,440,466 | Δ1 bp | 5.4% | intergenic (+31/‑45) | pcaF‑II → / → PP_2138 | beta‑ketoadipyl‑CoA thiolase subunit beta/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,440,466 | 0 | T | . | 5.4% | 234.5 / 6.7 | 74 | intergenic (+31/‑45) | pcaF‑II/PP_2138 | beta‑ketoadipyl‑CoA thiolase subunit beta/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (31/38); new base . (2/2); total (34/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
GGCGCGGATTTCCGGCACCCTGCTCAACGTCATGAAGCAAAATGGCGGTACGCTGGGTGTTGCGACCATGTGCGTCGGCCTGGGCCAAGGTATCACCACTGTCTTCGAACGCGTCTGATCGCGTAGCGGGACAGCAGCCGGGGC‑CTAGTGCCCCGGTTTTGTTTTTTCAGGTTTTTTTCAGGAGGTGTGCAACATGCAG‑ATACAACCAGGCGTATACCGGCATTACAAAGGGCCTGAGTACCGTGTCTTCAGTGTTGCGCGGCACTCCGAAACCGAAGAGTGGATGGTGTTCTACC > NC_002947/2440318‑2440613 | ggCGCGGATTTCCGGCACCCTGCTCAACGTCATGAAGCAAAATGGCGGTACGCTGGGTGTTGCGACCATGTGCGTCGGCCTGGGCCAAGGTATCACCACTGTCTTCGAACGCGTCTGATCGCGTAGCGGGACAGCAGCCGGGGC‑CTAGt < 2:204072/149‑1 (MQ=255)ggCGCGGATTTCCGGCACCCTGCTCAACGTCATGAAGCAAAATGGCGGTACGCTGGGTGTTGCGACCATGTGCGTCGGCCTGGGCCAAGGTATCACCACTGTCTTCGAACGCGTCTGATCGCGTAGCGGGACAGCAGCCGGGGC‑CTAGt > 8:40655/1‑149 (MQ=255) cgcgGATTTCCGGCACCCTGCTCAACGTCATGAAGCAAAATGGCGGTACGCTGGGTGTTGCGACCATGTGCGTCGGCCTGGGCCAAGGTATCACCACTGTCTTCGAACGCGTCTGATCGCGTAGCGGGACAGCAGCCGGGGC‑CTAGTGc > 4:101885/1‑149 (MQ=255) gATTTCCGGCACCCTGCTCAACGTCATGAAGCAAAATGGCGGTACGCTGGGTGTTGCGACCATGTGCGTCGGCCTGGGCCAAGGTATCACCACTGTCTTCGAACGCGTCTGATCGCGTAGCGGGACAGCAGCCGGGGC‑CTAGTGCCCCg < 6:363491/149‑1 (MQ=255) gATTTCCGGCACCCTGCTCAACGTCATGAAGCAAAATGGCGGTACGCTGGGTGTTGCGACCATGTGCGTCGGCCTGGGCCAAGGTATCACCACTGTCTTCGAACGCGTCTGATCGCGTAGCGGGACAGCAGCCGGGGC‑CTAGTGCCCCg < 2:127443/149‑1 (MQ=255) aTTTCCGGCACCCTGCTCAACGTCATGAAGCAAAATGGCGGTACGCTGGGTGTTGCGACCATGTGCGTCGGCCTGGGCCAAGGTATCACCACTGTCTTCGAACGCGTCTGATCGCGTAGCGGGACAGCAGCCGGGGCACTAG‑GCCCCgg < 1:205432/149‑1 (MQ=255) aTTTCCGGCACCCTGCTCAACGTCATGAAGCAAAATGGCGGTACGCTGGGTGTTGCGACCATGTGCGTCGGCCTGGGCCAAGGTATCACCACTGTCTTCGAACGCGTCTGATCGCGTAGCGGGACAGCAGCCGGGGC‑CTAGTGCCCCgg > 8:302960/1‑149 (MQ=255) ggCACCCTGCTCAACGTCATGAAGCAAAATGGCGGTACGCTGGGTGTTGCGACCATGTGCGTCGGCCTGGGCCAAGGTATCACCACTGTCTTCGAACGCGTCTGATCGCGTAGCGGGACAGCAGCCGGGGC‑CTAGTGCCCCGgttttgt < 5:185535/149‑1 (MQ=255) aCCCTGCTCAACGTCATGAAGCAAAATGGCGGTACGCTGGGTGTTGCGACCATGTGCGTCGGCCTGGGCCAAGGTATCACCACTGTCTTCGAACGCGTCTGATCGCGTAGCGGGACAGCAGCCGGGGC‑CTAGTGCCCCGgttttgtttt < 5:17368/149‑1 (MQ=255) aCCCTGCTCAACGTCATGAAGCAAAATGGCGGTACGCTGGGTGTTGCGACCATGTGCGTCGGCCTGGGCCAAGGTATCACCACTGTCTTCGAACGCGTCTGATCGCGTAGCGGGACAGCAGCCGGGGC‑CTAGTGCCCCGgttttgtttt > 7:110375/1‑149 (MQ=255) cTGCTCAACGTCATGAAGCAAAATGGCGGTACGCTGGGTGTTGCGACCATGTGCGTCGGCCTGGGCCAAGGTATCACCACTGTCTTCGAACGCGTCTGATCGCGTAGCGGGACAGCAGCCGGGGC‑CTAGTGCCCCGGTTTTGTTTTTTc < 5:237889/149‑1 (MQ=255) gCTCAACGTCATGAAGCAAAATGGCGGTACGCTGGGTGTTGCGACCATGTGCGTCGGCCTGGGCCAAGGTATCACCACTGTCTTCGAACGCGTCTGATCGCGTAGCGGGACAGCAACCGGGGCACTAG‑GCCCCggctgc > 8:102889/1‑135 (MQ=255) gCTCAACGTCATGAAGCAAAATGGCGGTACGCTGGGTGTTGCGACCATGTGCGTCGGCCTGGGCCAAGGTATCACCACTGTCTTCGAACGCGTCTGATCGCGTAGCGGGACAGCAACCGGGGCACTAG‑GCCCCggctgc < 7:102889/139‑5 (MQ=255) aaCGTCATGAAGCAAAATGGCGGTACGCTGGGTGTTGCGACCATGTGCGTCGGCCTGGGCCAAGGTATCACCACTGTCTTCGAACGCGTCTGATCGCGTAGCGGGACAGCAGCCGGGGC‑CTAGTGCCCCGGTTTTGTTTTTTCAGGt < 7:302960/147‑1 (MQ=255) tCATGAAGCAAAATCGCGGTACGCTGGGTGTTGCGACCATGTGCGTCGGCCTGGGCCAAGGTATCACCACTGTCTTCGAACGCGTCTGATCGCGTAGCGGGACAGCAGCCGGGGC‑CTAGTGCCCCGGTTTTGTTTTTTCAGGttttttt < 4:205553/149‑1 (MQ=255) aTGAAGCAAAATGGCGGTACGCTGGGTGTTGCGACCATGTGCGTCGGCCTGGGCCAAGGTATCACCACTGTCTTCGAACGCGTCTGATCGCGTAGCGGGACAGCAGCCGGGGC‑CTAGTGCCCCGGTTTTGTTTTTTCAGGttttttt > 6:190821/1‑147 (MQ=255) aTGAAGCAAAATGGCGGTACGCTGGGTGTTGCGACCATGTGCGTCGGCCTGGGCCAAGGTATCACCACTGTCTTCGAACGCGTCTGATCGCGTAGCGGGACAGCAGCCGGGGC‑CTAGTGCCCCGGTTTTGTTTTTTCAGGTTTTTTTc < 7:123591/148‑1 (MQ=255) aTGAAGCAAAATGGCGGTACGCTGGGTGTTGCGACCATGTGCGTCGGCCTGGGCCAAGGTATCACCACTGTCTTCGAACGCGTCTGATCGCGTAGCGGGACAGCAGCCGGGGC‑CTAGTGCCCCGGTTTTGTTTTTTCAGGTTTTTTTCa < 6:406816/149‑1 (MQ=255) aTGAAGCAAAATGGCGGTACGCTGGGTGTTGCGACCATGTGCGTCGGCCTGGGCCAAGGTATCACCACTGTCTTCGAACGCGTCTGATCGCGTAGCGGGACAGCAGCCGGGGC‑CTAGTGCCCAGGTTTTGTTTTTTCAGGttttttt > 6:265288/1‑147 (MQ=255) gAAGCAAAATGGTGGTACGCTGGGTGTTGCGACCATGTGCGTCGGCCTGGGCCAAGGTATCACCACTGTCTTCGAACGCGTCTGATCGCGTAGCGGGACAGCAGCCGGGGC‑CTAGTGCCCCGgttttgtttt < 6:202250/132‑1 (MQ=255) gAAGCAAAATGGTGGTACGCTGGGTGTTGCGACCATGTGCGTCGGCCTGGGCCAAGGTATCACCACTGTCTTCGAACGCGTCTGATCGCGTAGCGGGACAGCAGCCGGGGC‑CTAGTGCCCCGgttttgtttt > 5:202250/1‑132 (MQ=255) gAAGCAAAATGGCGGTACGCTGGGTGTTGCGACCATGTGCGTCGGCCTGGGCCAAGGTATCACCACTGTCTTCGAACGCGTCTGATCGCGTAGCGGGACAGCAGCCGGGGC‑CTAGTGCCCCGGTTTTGTTTTTTCAGGTTTTTTTCag > 1:311998/1‑148 (MQ=255) aaGCAAAATGGCGGTACGCTGGGTGTTGCGACCATGTGCGTCGGCCTGGGCCAAGGTATCACCACTGTCTTCGAACGCGTCTGATCGCGTAGCGGGACAGCAGCCGGGGC‑CTAGTGCCCCGGTTTTGTTTTTTCAGGTTTTTTTCagga < 2:311998/149‑1 (MQ=255) aaGCAAAATGGCGGTACGCTGGGTGTTGCGACCATGTGCGTCGGCCTGGGCCAAGGTATCACCACTGTCTTCGAACGCGTCTGATCGCGTAGCGGGACAGCAGCCGGGGC‑CTAGTGCCCCGGTTTTGTTTTTTCAGGTTTTTTTCag > 3:209630/1‑147 (MQ=255) aGCAAAATGGCGGTACGCTGGGTGTTGCGACCATGTGCGTCGGCCTGGGCCAAGGTATCACCACTGTCTTCGAACGCGTCTGATCGCGTAGCGGGACAGCAGCCGGGGC‑CTAGTGCCCCGGTTTTGTTTTTTCAGGTTTTTTTCaggag < 4:209630/149‑1 (MQ=255) aGCAAAATGGCGGTACGCTGGGTGTTGCGACCATGTGCGTCGGCCTGGGCCAAGGTATCACCACTGTCTTCGAACGCGTCTGATCGCGTAGCGGGACAGCAGCCGGGGC‑CTAGTGCCCCGGTTTTGTTTTTTCAGGTTTTTTTCagga < 7:40655/148‑1 (MQ=255) gCAAAATGGCGGTACGCTGGGTGTTGCGACCATGTGCGTCGGCCTGGGCCAAGGTATCACCACTGTCTTCGAACGCGTCTGATCGCGTAGCGGGACAGCAGCCGGGGC‑CTAGTGCCCCGGTTTTGTTTTTTCAGGTTTTTTTCaggagg > 5:186803/1‑149 (MQ=255) gCAAAATGGCGGTACGCTGGGTGTTGCGACCATGTGCGTCGGCCTGGGCCAAGGTATCACCACTGTCTTCGAACGCGTCTGATCGCGTAGCGGGACAGCAGCCGGGGC‑CTAGTGCCCCGGTTTTGTTTTTTCAGGTTTTTTTCaggag < 7:348185/148‑1 (MQ=255) gCAAAATGGCGGTACGCTGGGTGTTGCGACCATGTGCGTCGGCCTGGGCCAAGGTATCACCACTGTCTTCGAACGCGTCTGATCGCGTAGCGGGACAGCAGCCGGGGC‑CTAGTGCCCCGGTTTTGTTTTTTCAGGTTTTTTTCaggag > 8:348185/1‑148 (MQ=255) gCAAAATGGCGGTACGCTGGGTGTTGCGACCATGTGCGTCGGCCTGGGCCAAGGTATCACCACTGTCTTCGAACGCGTCCGATCGCGTAGCGGGACAGCAGCCGGGGC‑CTAGTGCCCCGGTTTTGTTTTTTCAGGTTTTTTTCaggagg > 5:24830/1‑149 (MQ=255) aaaTGGCGGTACGCTGGGTGTTGCGACCATGTGCGTCGGCCTGGGCCAAGGTATCACCACTGTCTTCGAACGCGTCTGATCGCGTAGCGGGACAGCAGCCGGGGC‑CTAGTGCCCCGGTTTTGTTTTTTCAGGTTTTTTTCAGGAGgtgt > 1:247245/1‑149 (MQ=255) tGGCGGTACGCTGGGTGTTGCGACCATGTGCGTCGGCCTGGGCCAAGGTATCACCACTGTCTTCGAACGCGTCTGATCGCGTAGCGGGACAGCAGCCGGGGC‑CTAGTGCCCCGGTTTTGTTTTTTCAGGTTTTTTTCAGGAGGTGTGCa < 6:186803/149‑1 (MQ=255) tGGCGGTACGCTGGGTGTTGCGACCATGTGCGTCGGCCTGGGCCAAGGTATCACCACTGTCTTCGAACGCGTCCGATCGCGTAGCGGGACAGCAGCCGGGGC‑CTAGTGCCCCGGTTTTGTTTTTTCAGGTTTTTTTCAGGAGGTGTGCa < 6:24830/149‑1 (MQ=255) gTACGCTGGGTGTTGCGACCATGTGCGTCGGCCTGGGCCAAGGTATCACCACTGTCTTCGAACGCGTCTGATCGCGTAGCGGGACAGCAGCCGGGGC‑CTAGTGCCCCGGTTTTGTTTTTTCAGGTTTTTTTCAGGAGGTGTGCAACATg < 5:221948/149‑1 (MQ=255) gCTGGGTGTTGCGACCATGTGCGTCGGCCTGGGCCAAGGTATCACCACTGTCTTCGAACGCGTCTGATCGCGTAGCGGGACAGCAGCCGGGGC‑CTAGTGCCCCGGTTTTGTTTTTTCAGGTTTTTTTCagg > 1:103104/1‑131 (MQ=255) gCTGGGTGTTGCGACCATGTGCGTCGGCCTGGGCCAAGGTATCACCACTGTCTTCGAACGCGTCTGATCGCGTAGCGGGACAGCAGCCGGGGC‑CTAGTGCCCCGGTTTTGTTTTTTCAGGTTTTTTTCagg < 2:103104/131‑1 (MQ=255) ggTGTTGCGACCATGTGCGTCGGCCTGGGCCAAGGTATCACCACTGTCTTCGAACGCGTCTGATCGCGTAGCGGGACGGCAGCCGGGGC‑CTAGTGCCCCGGTTTTGTTTTTTCAGGTTTTTTTCAGGAGGTGTGCA‑‑ATGCAG‑ATACAAc < 4:122109/149‑1 (MQ=255) gtgtTGCGACCATGTGCGTCGGCCTGGGCCAAGGTATCACCACTGTCTTCGAACGCGTCTGATCGCGTAGCGGGACAGCAGCCGGGGC‑CTAGTGCCCCGGTTTTGTTTTTTCAGGTTTTTTTCAGGAGGTGTGCAACATGCAG‑ATACaa > 5:226332/1‑149 (MQ=255) ttGCGACCATGTGCGTCGGCCTGGGCCAAGGTATCACCACTGTCTTCGAACGCGTCTGATCGCGTAGCGGGACAGCAGCCGGGGC‑CTAGTGCCCCGGTTTTGTTTTTTCAGGTTTTTTTCAGGAGGTGTGCAACATGCAG‑ATACAAc > 3:2404/1‑147 (MQ=255) gACCATGTGCGTCGGCCTGGGCCAAGGTATCACCACTGTCTTCGAACGCGTCTGATCGCGTAGCGGGACAGCAGCCGGGGC‑CTAGTGCCCCGGTTTTGTTTTTTCAGGTTTTTTTCAGGAGGTGTGCAACATGCAG‑ATAAAACCAGGca > 2:284732/1‑148 (MQ=255) aCCATGTGCGTCGGCCTGGGCCAAGGTATCACCACTGTCTTCGAACGCGTCTGATCGCGTAGCGGGACAGCAGCCGGGGC‑CTAGTGCCCCGGTTTTGTTTTTTCAGGTTTTTTTCAGGAGGTGTGCAACATGCAG‑ATACAACCAGGCg > 1:270386/1‑148 (MQ=255) tgtgCGTCGGCCTGGGCCAAGGTATCACCACTGTCTTCGAACGCGTCTGATCGCGTAGCGGGACAGCAGCCGGGGC‑CTAGTGCCCCGGTTTTGTTTTTTCAGGTTTTTTTCAGGAGGTGTGCAACATGCAG‑ATACAACCAGGCGTATAc > 7:26109/1‑149 (MQ=255) gTCGGCCTGGGCCAAGGTATCACCACTGTCTTCGAACGCGTCTGATCGCGTAGCGGGACAGCAGCCGGGGC‑CTAGTGCCCCGGTTTTGTTTTTTCAGGTTTTTTTCAGGAGGTGTGCAACATGCAG‑ATACAACCAGGCGTATACCGGCa < 3:101885/149‑1 (MQ=255) tCGGCCTGGGCCAAGGTATCACCACTGTCTTCGAACGCGTCTGATCGCGTAGCGGGACAGCAGCCGGGGC‑CTAGTGCCCCGGTTTTGTTTTTTCAGGTTTTTTTCag < 7:251738/107‑1 (MQ=255) tCGGCCTGGGCCAAGGTATCACCACTGTCTTCGAACGCGTCTGATCGCGTAGCGGGACAGCAGCCGGGGC‑CTAGTGCCCCGGTTTTGTTTTTTCAGGTTTTTTTCag > 8:251738/1‑107 (MQ=255) tCGGCCTGGGCCAAGGTATCACCACTGTCTTCGAACGCGTCTGATCGCGTAGCGGGACAGCAGCCGGGGC‑CTAGTGCCCCGGTTTTGTTTTTTCAGG‑TTTTTTCAGGAGgt > 1:53315/1‑111 (MQ=255) tCGGCCTGGGCCAAGGTATCACCACTGTCTTCGAACGCGTCTGATCGCGTAGCGGGACAGCAGCCGGGGC‑CTAGTGCCCCGGTTTTGTTTTTTCAGG‑TTTTTTCAGGAGgt < 2:53315/111‑1 (MQ=255) ggCCTGGGCCAAGGTATCACCACTGTCTTCGAACGCGTCTGATCGCGTAGCGGGACAGCAGCCGGGGC‑CTAGTGCCCCGGTTTTGTTTTTTCAGGTTTTTTTCAGGAGGTGTGCAACATGCAG‑ATACAACCAGGCGTATACCGGCAtt < 5:252974/148‑1 (MQ=255) ccTGGGCCAAGGTATCACCACTGTCTTCGAACGCGTCTGATCGCGTAGCGGGACAGCAGCCGGGGC‑CTAGTGCCCCGGTTTTGTTTTTTCAGGTTTTTTTCAGGAGGTGTGCAACATGCAG‑ATACAACCAGGCGTATACCGGCATTAc > 7:161935/1‑148 (MQ=255) ccTGGGCCAAGGTATCACCACTGTCTTCGAACGCGTCTGATCGCGTAGCGGGACAGCAGCCGGGGC‑CTAGTGCCCCGGTTTTGTTTTTTCAGGTTTTTTTCAGGAGGTGTGCAACATGCAG‑ATACAACCAGGCGTATACCGGCATTAc > 2:91395/1‑148 (MQ=255) ggCCAAGGTATCACCACTGTCTTCGAACGCGTCTGATCGCGTAGCGGGACAGCAGCCGGGGC‑CTAGTGCCCCGGTTTTGTTTTTTCAGGTTTTTTTCAGGAGGTGTGCAACATGCAG‑ATACAACCAGGCGTATACCGGCATTACAAAgg > 6:181155/1‑149 (MQ=255) ggTATCACCACTGTCTTCGAACGCGTCTGATCGCGTAGCGGGACAGCAGCCGGGGC‑CTAGTGCCCCGGTTTTGTTTTTTCAGGTTTTTTTCAGGAGGTGTGCAACATGCAG‑ATACAACCAGGCGTATACCGGCATTACAAAGGGCCTGa < 8:161935/149‑1 (MQ=255) gTATCACCACTCTCTTCCAACGCGTCTGATCGCGTAGCGGGACAGCAGCCGGGGC‑AAAGAGCCCCGGTTATGTTTTAACACGATTTTTTCAGGACGAGTGCAACATGCAG‑AAACAACCAGCGCTATTCCGGCAATAAAATGGGCCGGAg > 4:209493/1‑149 (MQ=255) accacTGTCTTCGAACGCGTCTGATCGCGTAGCGGGACAGCAGCCGGGGC‑CTAGTGCCCCGGTTTTGTTTTTTCAGGTTTTTTTCAGGAGGTGTGCAACATGCAG‑ATACAACCAGGCGTATACCGGCATTACAAAGGGCCTGAGTACCg < 2:247245/149‑1 (MQ=255) cacTGTCTTCGAACGCGTCTGATCGCGTAGCGGGACAGCAGCCGGGGC‑CTAGTGCCCCGGTTTTGTTTTTTCAGGTTTTTTTCAGGAGGTGTGCAACATGCAG‑ATACAACCAGGCGTATACCGGCATTACAAAGGGCCTGAGTACCgtg < 4:135127/149‑1 (MQ=255) ttCGAACGCGTCTGATCGCGTAGCGGGACAGCAGCCGGGGC‑CTAGTGCCCCGGTTTTGTTTTTTCAGGTTTTTTTCAGGAGGTGTGCAACATGCAG‑ATACAACCAGGCGTATACCGGCATTACaaa > 3:219515/1‑126 (MQ=255) ttCGAACGCGTCTGATCGCGTAGCGGGACAGCAGCCGGGGC‑CTAGTGCCCCGGTTTTGTTTTTTCAGGTTTTTTTCAGGAGGTGTGCAACATGCAG‑ATACAACCAGGCGTATACCGGCATTACaaa < 4:219515/126‑1 (MQ=255) ttCGAACGCGTCTGATCGCGTAGCGGGACAGCAGCCGGGGC‑CTAGTGCCCCGGTTTTGTTTTTTCAGGTTTTTTTCAGGAGGTGTGCAACATGCAG‑ATACAACCAGGCGTATACCGGCATTACAAAGGGCCTGAGTACCGTGTCTTCAg > 4:359275/1‑149 (MQ=255) cGAACGCGTCTGATCGCGTAGCGGGACAGCAGCCGGGGC‑CTAGTGCCCCGGTTTTGTTTTTTCAGGTTTTTTTCAGGAGGTGTGCAACATGCAG‑ATACAACCAGGCGTATACCGGCATTACAAAGGGCCTGAGTAcc > 5:24120/1‑137 (MQ=255) cGAACGCGTCTGATCGCGTAGCGGGACAGCAGCCGGGGC‑CTAGTGCCCCGGTTTTGTTTTTTCAGGTTTTTTTCAGGAGGTGTGCAACATGCAG‑ATACAACCAGGCGTATACCGGCATTACAAAGGGCCTGAGTAcc < 6:24120/137‑1 (MQ=255) cGAACGCGTCTGATCGCGTAGCGGGACAGCAGCCGGGGC‑CTAGTGCCCCGGTTTTGTTTTTTCAGGTTTTTTTCAGGAGGTGTGCAACATGCAG‑ATACAACCAGGCGTATACCGGCATTACAAAGGGCCTGAGTACCGTGTCTTCa < 8:110375/146‑1 (MQ=255) cGAACGCGTCTGATCGCGTAGCGGGACAGCAGCCGGGGC‑CTAGTGCCCCGGTTTTGTTTTTTCAGGTTTTTTTCAGGAGGTGTGCAACATGCAG‑ATACAACCAGGCGTATACCGGCATTACAAAGGGCCTGAGTACCGTGTCTTCAgt < 4:83877/148‑1 (MQ=255) gTCTGATCGCGTAGCGGGACAGCAGCCGGGGC‑CTAGTGCCCCGGTTTTGTTTTTTCAGGTTTTTTTCAGGAGGTGTGCAACATGCAG‑ATACAACCAGGCGTATACCGGCATTACAAAGGGCCTGAGTACCGTGTCTTCAGTGTTGcgcg < 2:270386/149‑1 (MQ=255) atttGATCGCGTAGCGGGACATCATCCGGGGC‑CTAGTGCCCCGGTTTTGTTTTTTCAGGTTTTTTTCAGGAGGTGTGCAACATGCAG‑ATACAACCAGGCGTATACCGGCATTAc < 8:199365/111‑1 (MQ=255) gATCGCGTAGCGGGACAGCAGCCGGGGC‑CTAGTGCCCCGGTTTTGTTTTTTCAGGTTTTTTTCAGGAGGTGTGCAACATGCAG‑ATACAACCAGGCGTATACCGGCATTACAAAGGGCCTGAGTACCGTGTCTTCAGTGTTGCGCGGCAc > 5:385799/1‑149 (MQ=255) gATCGCGTAGCGGGACAGCAGCCGGGGC‑CTAGTGCCCCGGTTTTGTTTTTTCAGGTTTTTTTCAGGAGGTGTGCAACATGCAG‑ATACAACCAGGCGTATACCGGCATTACAAAGGGCCTGAGTACCGTGTCTTCAGTGTTGCGCGGCAc > 1:202863/1‑149 (MQ=255) gTAGCGGGACAGCAGCCGGGGC‑CTAGTGCCCCGGTTTTGTTTTTTCAGGTTTTTTTCAGGAGGTGTGCAACATGCAG‑ATACAACCAGGCGTATACCGGCATTACAAAGGGCCTGAGTACCGTGTCTTCAGTGTTGCGCGGCACTCCGa > 7:52973/1‑148 (MQ=255) gCGGGACAGCAGCCGGGGC‑CTAGTGCCCCGGTTTTGTTTTTTCAGGTTTTTTTCAGGAGGTGTGCAACATGCAG‑ATACAACCAGGCGTATACCGGCATTACAAAGGGCCTGAGTACCGTGTCTTCAGTGTTGCGCGGCACTCCGAAAcc < 8:26109/149‑1 (MQ=255) ggACAGCAGCCGGGGC‑CTAGTGCCCCGGTTTTGTTTTTTCAGGTTTTTTTCAGGAGGTGTGCAACATGCAG‑ATACAACCAGGCGTATACCGGCATTACAAAGGGCCTGAGTACCGTGTCTTCAGTGTTGCGCGGCACTCCGAAACCGaa < 8:52973/149‑1 (MQ=255) ggACAGCAGCCGGGGC‑CTAGTGCCCCGGTTTTGTTTTTTCAGGTTTTTTTCAGGAGGTGTGCAAAAATCAGCATAAAACCGGGCTTATACCGGAATTACAAAGGCCCGGCGTACCGTGAATAAATTGTTCCCCGGACCTCCCAAACCg > 1:120299/1‑148 (MQ=255) aaccGGGGCACTAG‑GCCCCGGTTTTGTTTTTTCAGGTTTTTTTCAGGAGGTGTGCAACATGCAG‑ATACAACCAGGCGTATACCGGCATTACAAAGGGCCTGAGTACCGTGTCTTCAGTGTTGCGCGGCACTCCGAAACCGAAGAGTGGa > 2:156720/3‑149 (MQ=255) gcCGGGGC‑CTAGTGCCCCTGTTTTGTTTTTTCAGGTTTTTTTCAGGAGGTGTGCAACATGCAG‑ATACAACCAGGCGTATACCGGCATTACAAAGGGCCTGAGTACCGTGTCTTCAGTGTTGCGCGGCACTCCGAAACCGAAGAGTGGAt < 5:265288/149‑1 (MQ=255) gcCGGGGC‑CTAGTGCCCCGGTTTTGTTTTTTCAGGTTTTTTTCAGGAGGTGTGCAACATGCAG‑ATACAACCAGGCGTATACCGGCATTACAAAGGGCCTGAGTACCGTGTCTTCAGTGTTGCGCGGCATTCCGAAACCGAAGAGTGGAt < 6:226332/149‑1 (MQ=255) ccGGGGC‑CTAGTGCCCCGGTTTTGTTTTTTCAGGTTTTTTTCAGGAGGTGTGCAACATGCAG‑ATACAACCAGGCGTATACCGGCATTACAAAGGGCCTGAGTACCGTGTCTTCAGTGTTGCGCGGCACTCCGAAACCGAAGAGTGGATg < 1:91395/149‑1 (MQ=255) gggC‑CTAGTGCCCCGGTTTTGTTTTTTCAGGTTTTTTTCAGGAGGTGTGCAACATGCAG‑ATACAACCAGGCGTATACCGGCATTACAAAGGGCCTGAGTACCGTGTCTTCAGTGTTGCGCGGCACTCCGAAACCGAAGAGTGGATGgtg > 6:403329/1‑149 (MQ=255) gTGCCCCGGTTTTGTTTTTTCAGGTTTTTTTCAGGAGGTGTGCAACATGCAG‑ATACAACCAGGCGTATACCGGCATTACAAAGGGCCTGAGTACCGTGTCTTCAGTGTTGCGCGGCACTCCGAAACCGAAGAGTGGATGGTGTTCTAcc < 4:2404/149‑1 (MQ=255) | GGCGCGGATTTCCGGCACCCTGCTCAACGTCATGAAGCAAAATGGCGGTACGCTGGGTGTTGCGACCATGTGCGTCGGCCTGGGCCAAGGTATCACCACTGTCTTCGAACGCGTCTGATCGCGTAGCGGGACAGCAGCCGGGGC‑CTAGTGCCCCGGTTTTGTTTTTTCAGGTTTTTTTCAGGAGGTGTGCAACATGCAG‑ATACAACCAGGCGTATACCGGCATTACAAAGGGCCTGAGTACCGTGTCTTCAGTGTTGCGCGGCACTCCGAAACCGAAGAGTGGATGGTGTTCTACC > NC_002947/2440318‑2440613 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |