| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,740,843 | Δ1 bp | 5.3% | coding (3222/4494 nt) | PP_2395 → | leucine‑rich repeat‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,740,843 | 0 | G | . | 5.3% | 245.3 / 6.7 | 76 | coding (3222/4494 nt) | PP_2395 | leucine‑rich repeat‑containing protein |
| Reads supporting (aligned to +/- strand): ref base G (39/33); new base . (2/2); total (41/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TCAGAGGTGTGACCAGCCTGTCGCTGCTGCACCTTGACCTTCTGGAGGTGCCCAGCAGCCTATTGCTGGCTTTCCCTAACCTGCAAACCCTCGATCTGGGAGGGAACCTGTTGACGCGCCTTCCGCAGCCGTTGCTGCAGATAGCGCAGCTGCGGCATCTGAGCCTGACCAACAACCGGATCGTCCTGAACATCGCACAAACCGCCACACTGGCCAGTTGCACGAGCCTGCAGTCTCTCGACCTGTCCCACAACCCCCTGGGGAGCCGGTTCACGTTGGCGGGTTTGGCTGAAT > NC_002947/2740698‑2740991 | tCAGAGGTGTGACCAGCCTGTCGCTGCTGCACCTTGACCTTCTGGAGGTGCCCAGCAGCCTATTGCTGGCTTTCCCTAACCTGCAAACCCTCGATCTGGGAGGGAACCTGTTGACGCGCCTTCCTCAGCCGTTGCTGCAGATAGCGCAg > 8:152738/1‑149 (MQ=255) agGTGTGCCCAGCCTGTCGCTGCTGCACCTTGACCTTCTGGAGGTGCCCAGCAGCCTATTGCTGGCTTTCCCTAACCTGCAAACCCTCGATCTGGGAGGGAACCTGTTGACGCGCCTTCCGCAGCCGTTGCTGCAGATAGCGCAGCTGc < 7:152060/149‑1 (MQ=255) ggTGTGACCAGCCTGTCGCTGCTGCACCTTGACCTTCTGGAGGTGCCCAGCAGCCTATTGCTGGCTTTCCCTAACCTGCAAACCCTCGATCTGGGAGGGAACCTGTTGACGCGCCTTCCGCAGCCGTTGCTGCAGATAGCGCAGCTGCg < 2:152071/149‑1 (MQ=255) gtgtGACCAGCCTGTCGCTGCTGCACCTTGACCTTCTGGAGGTGCCCAGCAGCCTATTGCTGGCTTTCCCTAACCTGCAAACCCTCGATCTGGGAGGGAACCTGTTGACGCGCCTTCCGCAGCCGTTGCTGCAGATAGCGCAGCTGCgg < 3:347242/149‑1 (MQ=255) aCCAGCCTGTCGCTGCTGCACCTTGACCTTCTGGAGGTGCCCAGCAGCCTATTGCTGGCTTTCCCTAACCTGCAAACCCTCGATCTGGGAGGGAACCTGTTGACGCGCCTTCCGCAGCCGTTGCTGCAGATAGCGCAGCTGCGGCATCt > 7:32116/1‑149 (MQ=255) cAGCCTGTCGCTGCTGCACCTTGACCTTCTGGAGGTGCCCAGCAGCCTATTGCTGGCTTTCCCTAACCTGCAAACCCTCGATCTGGGAGGGAACCTGTTGACGCGCCTTCCGCAGCCGTTGCTGCAGATAGCGCAGCTGCGGCATCt > 7:164890/1‑147 (MQ=255) gCCTGTCGCTGCTGCACCTTGACCTTCTGGAGGTGCCCAGCAGCCTATTGCTGGCTTTCCCTAACCTGCAAACCCTCGATCTGGGAGGGAACCTGTTGACGCGCCTTCCGCAGCCGTTGCTGCAGATAGCGCAGCTGCGGCATCTGAGc < 2:45764/149‑1 (MQ=255) tCGCTGCTGCACCTTGACCTTCTGGAGGTGCCCAGCAGCCTATTGCTGGCTTTCCCTAACCTGCAAACCCTCGATCTGGGAGGGAACCTGTTGACGCGCCTTCCGCAGCCGTTGCTGCAGATAGCGCAGCTGCGGCa < 1:161628/137‑1 (MQ=255) tCGCTGCTGCACCTTGACCTTCTGGAGGTGCCCAGCAGCCTATTGCTGGCTTTCCCTAACCTGCAAACCCTCGATCTGGGAGGGAACCTGTTGACGCGCCTTCCGCAGCCGTTGCTGCAGATAGCGCAGCTGCGGCATCTGAGCCTGAc > 2:21781/1‑149 (MQ=255) gctgctGCACCTTGACCTTCTGGAGGTGCCCAGCAGCCTATTGCTGGCTTTCCCTAACCTGCAAACCCTCGATCTGGGAGGGAACCTGTTGACGCGCCTTCCGCAGCCGTTGCTGCAGATAGCGCAGCTGCGGCATCTGAGCCTGAcc > 5:195002/1‑148 (MQ=255) gctgctGCACCTTGACCTTCTGGAGGTGCCCAGCAGCCTATTGCTGGCTTTCCCTAACCTGCAAACCCTCGATCTGGGAGGGAACCTGTTGACGCGCCTTCCGCAGCCGTTGCTGCAGATAGCGCAGCTGCGGCATCTGAGCCTGAcc > 3:84093/1‑148 (MQ=255) gctgctGCACCTTGACCTTCTGGAGGTGCCCAGCAGCCTATTGCTGGCTTTCCCTAACCTGCAAACCCTCGATCTGGGAGGGAACCTGTTGACGCGCCTTCCGCAGCCGTTGCTGCAGATAGCGCAGCTGCGGCATCTGAGCCTGAcc > 1:308295/1‑148 (MQ=255) tgcACCTTGACCTTCTGGAGGTGCCCAGCAGCCTATTGCTGGCTTTCCCTAACCTGCAAACCCTCGATCTGGGAGGGAACCTGTTGACGCGCCTTCCGCAGCCGTTGCTGCAGATAGCGCAGCTGCGGCATCTGAGCCTGACCaacaac < 6:313118/149‑1 (MQ=255) tgcACCTTGACCTTCTGGAGGTGCCCAGCAGCCTATTGCTGGCTTTCCCTAACCTGCAAACCCTCGATCTGGGAGGGAACCTGTTGACGCGCCTTCCGCAGCCGTTGCTGCAGATAGCGCAGCTGCGGCATCTGAGCCTGACCaacaac < 6:307495/149‑1 (MQ=255) cACCTTGACCTTCTGGAGGTGCCCAGCAGCCTATTGCTGGCTTTCCCTAACCTGCAAACCCTCGATCTGGGAGGGAACCTGTTGACGCGCCTTCCGCAGCCGTTGCTGCAGATAGCGCAGCTGCGGCATCTGAGCCTGACCaacaac < 3:324144/147‑1 (MQ=255) aCCTTGACCTTCTGGAGGTGCCCAGCAGCCTATTGCTGGCTTTCCCTAACCTGCAAACCCTCGATCTGGGAGGGAACCTGTTGACGCGCCTTCCGCAGCCGTTGCTGCAGATAGCGCAGCTGCGGCATCTGAGCCTGACCAACAACCg > 7:276144/1‑148 (MQ=255) ccTTGACCTTCTGGAGGTGCCCAGCAGCCTATTGCTGGCTTTCCCTAACCTGCAAACCCTCGATCTGGGAGGGAACCTGTTGACGCGCCTTCCGCAGCCGTTGCTGCAGATAGCGCAGCTGCGGCATCTGAGCCTGACCAACAACCGGa < 8:112364/149‑1 (MQ=255) cTTGACCTTCTGGAGGTGCCCAGCAGCCTATTGCTGGCTTTCCCTAACCTGCAAACCCTCGATCTGGGAGGGAACCTGTTGACGCGCCTTCCGCAGCCGTTGCTGCAGATAGCGCAGCTGCGGCATCTGAGCCTGACCAACAACCGGAt > 8:323565/1‑149 (MQ=255) cTTGACCTTCTGGAGGTGCCCAGCAGCCTATTGCTGGCTTTCCCTAACCTGCAAACCCTCGATCTGGGAGGGAACCTGTTGACGCGCCTTCCGCAGCCGTTGCTGCAGATAGCGCAGCTGCGGCATCTGAGCCTGACCAACAACCGGAt > 3:278187/1‑149 (MQ=255) ttGACCTTCTGGAGGTGCCCAGCAGCCTATTGCTGGCTTTACCTAACCTGCAAACCCTCGATCTGGGAGGGAACCTGTTGACGCGCCTTCCGCAGCCGTTGCTGCAGATAGCGCAGCTGCGGCATCTGAGCCTGACCAACAACCGGATc > 1:249788/1‑149 (MQ=255) aCCTTCTGGAGGTGCCCAGCAGCCTATTGCTGGCTTTCCCTAACCTGCAAACCCTCGATCTGGGAGGGAACCTGTTGACGCGCCTTCCGCAGCCGTTGCTGCAGATAGCGCAGCTGCGGCATCTGAGCCTGACCAACAAcc < 7:98435/141‑1 (MQ=255) aCCTTCTGGAGGTGCCCAGCAGCCTATTGCTGGCTTTCCCTAACCTGCAAACCCTCGATCTGGGAGGGAACCTGTTGACGCGCCTTCCGCAGCCGTTGCTGCAGATAGCGCAGCTGCGGCATCTGAGCCTGACCAACAAcc > 8:98435/1‑141 (MQ=255) aCCTTCTGGAGGTGCCCAGCAGCCTATTGCTGGCTTTCCCTAACCTGCAAACCCTCGATCTGGGAGGGAACCTGTTGACGCGCCTTCCGCAGCCGTTGCTGCAGATAGCGCAGCTGCGGCATCTGAGCCTGACCAACAACCGGATCGTc > 6:146572/1‑149 (MQ=255) ccTTCTGGAGGTGCCCAGCAGCCTATTGCTGGCTTTCCCTAACCTGCAAACCCTCGATCTGGGAGGGAACCTGTTGACGCGCCTTCCGCAGCCGTTGCTGCAGATAGCGCAGCTGCGGCATCTGAGCCTGCACAACAACCGGATCGt > 8:153862/1‑147 (MQ=255) ccTTCTGGAGGTGCCCAGCAGCCTATTGCTGGCTTTCCCTAACCTGCAAACCCTCGATCTGGGAGGGAACCTGTTGACGCGCCTTCCGCAGCCGTTGCTGCAGATAGCGCAGCTGCGGCATCTGAGCCTGACCAACAACCGGATCGTcc > 2:303584/1‑149 (MQ=255) ccTTCTGGAGGTGCCCAGCAGCCTATTGCTGGCTTTCCCTAACCTGCAAACCCTCGATCTGGGAGGGAACCTGTTGACGCGCCTTCCGCAGCCGTTGCTGCAGATAGCGCAGCTGCGGCATCTGAGCCTGACCAACAACCGGATCGTcc > 8:159309/1‑149 (MQ=255) cTTCTGGAGGTGCCCAGCAGCCTATTGCTGGCTTTCCCTAACCTGCAAACCCTCGATCTGGGAGGGAACCTGTTGACGCGCCTTCCGCAGCCGTTGCTGCAGATAGCGCAGCTGCGGCATCTGAGCCTGACCAACAACCGGATCGTCCt > 5:68870/1‑149 (MQ=255) cTTCTGGAGGTGCCCAGCAGCCTATTGCTGGCTTTCCCTAACCTGCAAACCCTCGATCTGGGAGGGAACCTGTTGACGCGCCTTCCGCAGCCGTTGCTGCAGATAGCGCAGCTGCGGCATCTGAGCCTGACCAACAACCGGATCGTCCt > 5:62757/1‑149 (MQ=255) ttCTGGAGGTGCCCAGCAGCCTATTGCTGGCTTTCCCTAACCTGCAAACCCTCGATCTGGGAGGGAACCTGTTGACGCGCCTTCCGCAGCCGTTGCTGCAGATAGCGCAGCTGCGGCATCTGAGCCTGACCAACAACCGGATCGTCCt > 1:313030/1‑148 (MQ=255) gAGGTGCCCAGCAGCCTATTGCTGGCTTTCCCTAACCTGCAAACCCTCGATCTGGGAGGGAACCTGTTGACGCGCCTTCCGCAGCCGTTGCTGCAGATAGCGCAGCTGCGGCATCTGAGCCTGACCAACAACCGGATCGTCCTGAACAt < 8:164890/149‑1 (MQ=255) gTGCCCAGCAGCCTATTGCTGGCTTTCCCTAACCTGCAAACCCTCGATCTGGGAGGGAACCTGTTGACGCGCCTTCCGCAGCCGTTGCTGCAGATAGCGCAGCTGCGGCATCTGAGCCTGACCAACAACCGGATCGTCCTGAACATCGc < 1:21781/149‑1 (MQ=255) cccAGCAGCCTATTGCTGGCTTTCCCTAACCTGCAAACCCTCGATCTGGGAGGGAACCTGTTGACGCGCCTTCCGCAGCCGTTGCTGCAGATAGCGCAGCTGCGGCATCTGAGCCTGACCAACAACCGGATCGTCCTGAACATCGca > 3:37812/1‑147 (MQ=255) cccAGCAGCCTATTGCTGGCTTTCCCTAACCTGCAAACCCTCGATCTGGGAGGGAACCTGTTGACGCGCCTTCCGCAGCCGTTGCTGCAGATAGCGCAGCTGCGGCATCTGAGCCTGACCAACAACCGGATCGTCCTGAACATCGca < 4:37812/147‑1 (MQ=255) agcCTATTGCTGGCTTTCCCTAACCTGCAAACCCTCGATCTGGGAGGGAACCTGTTGACGCGCCTTCCGCAGCCGTTGCTGCAGATAGCGCAGCTGCGGCATCTGAGCCTGACCAACAACCGGATCGTCCTGAACATCGCACAAACCGc < 1:113962/149‑1 (MQ=255) gCTGGCTTTCCCTAACCTGCAAACCCTCGATCTGGGAGGGAACCTGTTGACGCGCCTTCCGCAGCCGTTGCTGCAGATAGCGCAGCTGCGGCATCTGAGCCTGACCAACAACCGGATCGTCCTGAACATCGCACAAACCGCCACACTg < 6:195002/148‑1 (MQ=255) cTGGCTTTCCCTAACCTGCAAACCCTCGATCTGGGAGGGAACCTGTTGACGCGCCTTCCGCAGCCGTTGCTGCAGATAGCGCAGCTGCGGCATCTGAGCCTGACCAACAACCGGATCGTCCTGAACATCGCACAAACCGCCACACTGGc < 2:313030/149‑1 (MQ=255) tttCCCTAACCTGCAAACCCTCGATCTGGGAGGGAACCTGTTGACGCGCCTTCCGCAGCCGTTGCTGCAGATAGCGCAGCTGCGGCATCTGAGCCTGACCAACAACCGGATCGTCCTGAACATCGCACAAACCGCCACACTGGCCAGtt > 5:46385/1‑149 (MQ=255) tttCCCTAACCTGCAAACCCTCGATCTGGGAGGGAACCTGTTGACGCGCCTTCCGCAGCCGTTGCTGCAGATAGCGCAGCTGCGGCATCTGAGCCTGACCAACAACCGGATCGTCCTGAACATCGCACAAACCGCCACACTGGCCAGtt > 1:85974/1‑149 (MQ=255) tCCCTAACCTGCAAACCCTCGATCTGGGAGGGAACCTGTTGACGCGCCTTCCGCAGCCGTTGCTGCAGATAGCGCAGCTGCGGCATCTGAGCCTGACCAACAACCGGATCGTCCTGAACATCGCACAAACCGCCACACTGGCCAGTTg < 6:68870/148‑1 (MQ=255) tCCCTAACCTGCAAACCCTCGATCTGGGAGGGAACCTGTTGACGCGCCTTCCGCAGCCGTTGCTGCAGATAGCGCAGCTGCGGCATCTGAGCCTGACCAACAACCGGATCGTCCTGAACATCGCACAAACCGCCACACTGGCCAGTTg < 6:62757/148‑1 (MQ=255) ccTAACCTGCAAACCCTCGATCTGGTATGGAACCTGTTGACGCGCCTTCCGCAGCCGTTTCTGCAGATAGCGCATCTGCGGCATCTGAGCCTGACCAACAACCGGATCGTCCTGAACATCGCACAAACCGCCACACTGGCCAGTTGCa < 7:152738/148‑1 (MQ=255) aaCCTGCAAACCCTCGATCTGGGAGGGAACCTGTTGACGCGCCTTCCGCAGCCGTTGCTGCAGATAGCGCAGCTGCGGCATCTGAGCCTGACCAACAACCGGATCGTCCTGAACATCGCACAAACCGCCACACTGGCCAGTTGCACGAg > 4:9346/1‑149 (MQ=255) aCCTGCAAACCCTCGATCTGGGAGGGAACCTGTTGACGCGCCTTCCGCAGCCGTTGCTGCAGATAGCGCAGCTGCGGCATCTGAGCCTGACCAACAACCGGATCGTCCTGAACATCGCACAAACCGCCACACTGGCCAGTTGCACGa < 8:32116/147‑1 (MQ=255) cTGCAAACCCTCGATCTGGGAGGGAACCTGTTGACGCGCCTTCCGCAGCCGTTGCTGCAGATAGCGCAGCTGCGGCATCTGAGCCTGACCAACAACCGGATCGTCCTGAACATCGCACAAACCGCCACACTGGCCAGTTGCACGAGCCt > 4:362617/1‑149 (MQ=255) cTGCAAACCCTCGATCTGGGAGGGAACCTGTTGACGCGCCTTCCGCAGCCGTTGCTGCAGATAGCGCAGCTGCGGCATCTGAGCCTGACCAACAACCGGATCGTCCTGAACATCGCACAAACCGCCACACTGGCCAGTTGCACGAGCCt < 4:84093/149‑1 (MQ=255) cTGCAAACCCTCGATCTGGGAGGGAACCTGTTGACGCGCCTTCCGCAGCCGTTGCTGCAGATAGCGCAGCTGCGGCATCTGAGCCTGACCAACAACCGGATCGTCCTGAACATCGCACAAACCGCCACACTGGCCAGTTGCACGAGCCt > 5:21296/1‑149 (MQ=255) cAAACCCTCGATCTGGGAGGGAACCTGTTGACGCGCCTTCCGCAGCCGTTGCTGCAGATAGCGCAGCTGCGGCATCTGAGCCTGACCAACAACCGGATCGTCCTGAACATCGCACAAACCGCCACACTGGCCAGTTGCACGAGCCTGCa < 2:85974/149‑1 (MQ=255) gggagggaACCTGTTGACGCGCCTTCCGCAGCCGTTGCTGCAGATAGCGCAGCTGCGGCATCTGAGCCTGACCAACAACCGGATCGTCCTGAACATCGCACAAACCGCCACACTGGCCAGTTGCACGAGCCTGCAGTCTCTCGACCTGt > 4:240481/1‑149 (MQ=255) ggagggaACCTGTTGACGCGCCTTCCGCAGCCGTTGCTGCAGATAGCGCAGCTGCGGCATCTGAGCCTGACCAACAACCGGATCGTCCTGAACATCGCACAAACCGCCACACTGGCCAGTTGCACGAGCCTGCAGTCTCTCGAc < 3:232815/144‑1 (MQ=255) ggagggaACCTGTTGACGCGCCTTCCGCAGCCGTTGCTGCAGATAGCGCAGCTGCGGCATCTGAGCCTGACCAACAACCGGATCGTCCTGAACATCGCACAAACCGCCACACTGGCCAGTTGCACGAGCCTGCAGTCTCTCGACCTGTc > 8:18792/1‑149 (MQ=255) aggtaACCTGTTGACTCGACTTCCGCAGCCTTGTCTGCAGATAGC‑CAGCTGCGGCATCTGAGCCTGACCAACAACCTGATCGTCCTGAAAATCGCACTAACCGCCACACTGGCCAGTTGCACGAGCCTGCAGTCTCTCGACCTGTcc < 8:41241/147‑1 (MQ=255) agggaACCTGTTGACGCGCCTTCCGCAGCCGTTGCTGCAGATAGCGCAGCTGCGGCATCTGAGCCTGACCAACAACCGGATCGTCCTGAACATCGCACAAACCGCCACACTGGCCAGTTGCACGAGCCTGCAGTCTCTCGACCTGTccc < 7:323565/149‑1 (MQ=255) agggaACCTGTTGACGCGCCTTCCGCAGCCGTTGCTGCAGATAGCGCAGCTGCGGCATCTGAGCCTGACCAACAACCGGATCGTCCTGAACATCGCACAAACCGCCACACTGGCCAGTTGCACGAGCCTGCAGTCTCTCGACCTGTcc > 2:192001/1‑148 (MQ=255) agggaACCTGTTGACGCGCCTTCCGCAGCCGTTGCTGCAGATAGC‑CAGCTGCGGCATCTGAGCCTGACCAACAACCGGATCGTCCTGAACATCGCACAAACCGCCACACTGGCCAGTTGCACGAGCCTGCAGTCTCTCGACCTGTcc > 7:47404/1‑147 (MQ=255) agggaACCTGTTGACGCGCCTTCCGCAGCCGTTGCTGCAGATAGC‑CAGCTGCGGCATCTGAGCCTGACCAACAACCGGATCGTCCTGAACATCGCACAAACCGCCACACTGGCCAGTTGCACGAGCCTGCAGTCTCTCGACCTGTcc < 8:47404/147‑1 (MQ=255) agggaACCTGTTGACGCGCCTTCCGCAGCCGTTGCTGCAGATAGC‑AAGCTGCGGCATCTGAGCCTGACCAACAACCGGATCGTCCTGAACATCGCACAAACCGCCACACTGGCAAGTTGCACGCGACTGCAGTCTCTCGACCTGTccc > 7:41241/1‑148 (MQ=255) aaCCTGTTGACGCGCCTTCCGCAGCCGTTGCTGCAGATAGCGCAGCTGCGGCATCTGAGCCTGACCAACAACCGGATCGTCCTGAACATCGCACAAACCGCCACACTGGCCAGTTGCACGAGCCTGCAGTCTCTCGACCTGTCCCACaa > 5:175860/1‑149 (MQ=255) cTGTTGACGCGCCTTCCGCAGCCGTTGCTGCAGATAGCGCAGCTGCGGCATCTGAGCCTGACCAACAACCGGATCGTCCTGAACATCGCACAAACCGCCACACTGGCCAGTTGCACGAGCCTGCAGtctctc < 5:343445/132‑1 (MQ=255) cTGTTGACGCGCCTTCCGCAGCCGTTGCTGCAGATAGCGCAGCTGCGGCATCTGAGCCTGACCAACAACCGGATCGTCCTGAACATCGCACAAACCGCCACACTGGCCAGTTGCACGAGCCTGCAGtctctc > 6:343445/1‑132 (MQ=255) aCGCGCCTTCCGCAGCCGTTGCTGCAGATAGCGCAGCTGCGGCATCTGAGCCTGACCAACAACCGGATCGTCCTGAACATCGCACAAACCGCCACACTGGCCAGTTGCACGAGCCTGCAGTCTCTCGa > 1:137709/1‑128 (MQ=255) aCGCGCCTTCCGCAGCCGTTGCTGCAGATAGCGCAGCTGCGGCATCTGAGCCTGACCAACAACCGGATCGTCCTGAACATCGCACAAACCGCCACACTGGCCAGTTGCACGAGCCTGCAGTCTCTCGa < 2:137709/128‑1 (MQ=255) aCGCGCCTTCCGCAGCCGTTGCTGCAGATAGCGCAGCTGCGGCATCTGAGCCTGACCAACAACCGGATCGTCCTGAACATCGCACAAACCGCCACACTGGCCAGTTGCACGAGCCTGCAGTCTCTCGACCTGTCCCACAACCCCCTggg > 8:139216/1‑149 (MQ=255) aCGCGCCTTCCGCAGCCGTTGCTGCAGATAGCGCAGCTGCGGCATCTGAGCCTGACCAACAACCGGATCGTCCTGAACATCGCACAAACCGCCACACTGGCCAGTTGCACGAGCCTGCAGTCTCTCGACCTGTCCCACAACCCCCTgg < 4:278187/148‑1 (MQ=255) aCGCGCCTTCCGCAGCCGTTGCTGCAGATAGCGCAGCTGCGGCATCTGAGCCTGACCAACAACCGGATCGTCCTGAACATCGCACAAACCGCCACACTGGCCAGTTGCACGAGCCTGCAGACTCTCGACCTGTCCCACAACCCCCTggg > 5:62213/1‑149 (MQ=255) cTTCCGCAGCCGTTGCTGCAGATAGCGCAGCTGCGGCATCTGAGCCTGACCAACAACCGGATCGTCCTGAACATCGCACAAACCGCCACACTGGCCAGTTGCACGAGCCTGCAGTCTCTCGACCTGTCCCACAACCCCCTGGGGAGCCg > 4:80169/1‑149 (MQ=255) ttCCGCAGCCGTTGCTGCAGATAGCGCAGCTGCGGCATCTGAGCCTGACCAACAACCGGATCGTCCTGAACATCGCACAAACCGCCACACTGGCCAGTTGCACGAGCCTGCAGTCTCTCGACCTGTCCCACAACCCCCTGGGGAGCCgg > 8:56408/1‑149 (MQ=255) ccGCAGCCGTTGCTGCAGATAGCGCAGCTGCGGCATCTGAGCCTGACCAACAACCGCATCGTCCTGAACATCGCACAAACCGCCACACTGCCCAGTTGCACGAGCCTGCAGTCTCTCGACCTGTCCCACAACCCCCTGGGGAGCCgg < 6:332861/147‑1 (MQ=255) cGCAGCCGTTGCTGCAGATAGCGCAGCTGCGGCATCTGAGCCTGACCAACAACCGGATCGTCCTGAACATCGCACAAACCGCCACACTGGCCAGTTGCACGAGCCTGCAGTCTCTCGACCTGTCCCACAACCCCCTGGGGAGCCGGtt < 2:249788/148‑1 (MQ=255) cGCAGCCGTTGCTGCAGATAGCGCAGCTGCGGCATCTGAGCCTGACCAACAACCGGATCGTCCTGAACATCGCACAAACCGCCACACTGGCCAGTTGCACGAGCCTGCAGTCTCTCGACCTGTCCCACAACCCCCTGGGGAGCCGGTTc < 5:146572/149‑1 (MQ=255) ccGTTGCTGCAGATAGCGCAGCTGCGGCATCTGAGCCTGACCAACAACCGGATCGTCCTGAACATCGCACAAACCGCCACACTGGCCAGTTGCACGAGCCTGCAGTCTCTCGACCTGTcc > 5:90142/1‑120 (MQ=255) ccGTTGCTGCAGATAGCGCAGCTGCGGCATCTGAGCCTGACCAACAACCGGATCGTCCTGAACATCGCACAAACCGCCACACTGGCCAGTTGCACGAGCCTGCAGTCTCTCGACCTGTcc < 6:90142/120‑1 (MQ=255) tgcAGATAGCGCAGCTGCGGCATCTGAGCCTGACCAACAACCGGATCGTCCTGAACATCGCACAAACCGCCACACTGGCCAGTTGCACGAGCCTGCAGTCTCTCGACCTGTCCCACAACCCCCTGGGGAGCCGGTTCACGTTGGCGGGt > 4:320912/1‑149 (MQ=255) tgcAGATAGCGCAGCTGCGGCATCTGAGCCTGACCAACAACCGGATCGTCCTGAACATCGCACAAACCGCCACACTGGCCAGTTGCACGAGCCTGCAGTCTCTCGACCTGTCCCACAACCCCCTGGGGAGCCGGTTCACGTTGGCGGGt > 6:208707/1‑149 (MQ=255) cAGATAGCGCAGCTGCGGCATCTGAGCCTGACCAACAACCGGATCGTCCTGAACATCGCACAAACCGCCACACTGGCCAGTTGCACGAGCCTGCAGTCTCTCGACCTGTCCCACAACCCCCTGGGGAGCCGGTTCACGTTGGCGGGttt < 3:240481/149‑1 (MQ=255) aTAGCGCAGCTGCGGCATCTGAGCCTGACCAACAACCGGATCGTCCTGAACATCGCACAAACCGCCACACTGGCCAGTTGCACGAGCCTGCAGTCTCTCGACCTGTCCCACAACCCCCTGGGGAGCCGGTTCACGTTGGCGGGTTTGGc > 3:200218/1‑149 (MQ=255) tAGCGCAGCTGCGGCATCTGAGCCTGACCAACAACCGGATCGTCCTGAACATCGCACAAACCGCCACACTGGCCAGTTGCACGAGCCTGCAGTCTCTCGACCTGTCCCACAACCCCCTGGGGAGCCGGTTCACGTTGGCGGGTTTGGCt < 8:276144/149‑1 (MQ=255) cgcAGCTGCGGCATCTGAGCCTGACCAACAACCGGATCGTCCTGAACATCGCACAAACCGCCACACTGGCCAGTTGCACGAGCCTGCAGTCTCTCGACCTGTCCCCCAACCCCCTGGGGAGCCGGTTCACGTTGGCGGGTTTGGCTGaa > 2:305652/1‑149 (MQ=255) gcAGCTGCGGCATCTGAGCCTGACCAACAACCGGATCGTCCTGAACATCGCACAAACCGCCACACTGGCCAGTTGCACGAGCCTGCAGTCTCTCGACCTGTCCCACAACCCCCTGGGGAGCCGGTTCACGTTGGCGGGTTTGGCTGAAt < 7:139216/149‑1 (MQ=255) gcAGCTGCGGCATCTGACCCTGACCAACAACCGGATCGTCCTGAACATCGCACAAACCGCCAAACTGGCCAGTTGCACGAGACTGCAGTCTCTCGACCAGTCCCACAACCCCCTGGGGAGCCGGTTCACGTTGGAGGGGTTGGATGAAt > 6:403447/1‑149 (MQ=255) | TCAGAGGTGTGACCAGCCTGTCGCTGCTGCACCTTGACCTTCTGGAGGTGCCCAGCAGCCTATTGCTGGCTTTCCCTAACCTGCAAACCCTCGATCTGGGAGGGAACCTGTTGACGCGCCTTCCGCAGCCGTTGCTGCAGATAGCGCAGCTGCGGCATCTGAGCCTGACCAACAACCGGATCGTCCTGAACATCGCACAAACCGCCACACTGGCCAGTTGCACGAGCCTGCAGTCTCTCGACCTGTCCCACAACCCCCTGGGGAGCCGGTTCACGTTGGCGGGTTTGGCTGAAT > NC_002947/2740698‑2740991 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |