| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,867,733:1 | +C | 5.8% | intergenic (‑28/+24) | thyA ← / ← lgt | thymidylate synthase/prolipoprotein diacylglyceryl transferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,867,733 | 1 | . | C | 5.8% | 280.9 / 9.2 | 69 | intergenic (‑28/+24) | thyA/lgt | thymidylate synthase/prolipoprotein diacylglyceryl transferase |
| Reads supporting (aligned to +/- strand): ref base . (31/34); new base C (2/2); total (33/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.27e-01 | |||||||||||
GCAGGTCGAAACGCAGCATCGCGCCCGGCAGGCTGATGGTGCGGATGCCGGTGCGGTTTCCCTGCAACGTGCCGTTATCAATGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGT‑AGCAAAAACGGCAGGGG‑GATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGACGAGGCCACCGACTATCATCGGAATGCACAGCAACTGGCCTTGAGTGAGCCAGCCGAACGCGATGTAACCGAGTT > NC_002947/5867591‑5867881 | gCAGGTCGAAACGCAGCATCGCGCCCGGCAGGCTGATGGTGCGGATGCCGGTGCGGTTTCCCTGCAACGTGCCGTTATCAATGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGT‑AGCAAAAACGGCAGGGG‑GATCGc > 5:389198/1‑149 (MQ=255) cAGGTCGAAACGCAGCATCGCGCCCGGCAGGCTGATGGTGCGGATGCCGGTGCGGTTTCCCTGCAACGTGCCGTTATCAATGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGT‑AGCAAAAACGGCAGGGG‑GATCGcc > 8:118809/1‑149 (MQ=255) tCGAAACGCAGCATCGCGCCCGGCAGGCTGATGGTGCGGATGCCGGTGCGGTTTCCCTGCAACGTGCCGTTTTCAATAACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGT‑AGCAAAAACGGCAGGGG‑GATCGCCCCTg > 1:297840/1‑149 (MQ=255) gAAACGCAGCATCGCGCCCGGCAGGCTGATGGTGCGGATGCCGGTGCGGTTTCCCTGCAACGTGCCGTTATCAATGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGT‑AGCAAAAACGGCAGGGGCGATC‑CCCCTGcc < 4:11348/149‑1 (MQ=255) gAAACGCAGCATCGCGCCCGGCAGGCTGATGGTGCGGATGCCGGTGCGGTTTCCCTGCAACGTGCCGTTATCAATGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGT‑AGCAAAAACGGCAGGGG‑GATCGCCCCTGcc > 2:182976/1‑149 (MQ=255) aaaCGCAGCATCGCGCCCGGCAGGCTGATGGTGCGGATGCCGGTGCGGTTTCCCTGCAACGTGCCGTTATCAATGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGT‑AGCAAAAACGGCAGGGG‑GATCGCCCCTGCCg > 3:105107/1‑149 (MQ=255) cagcaTCGCGCCCGGCAGGCTGATGGTGCGGATGCCGGTGCGGTTTCCCTGCAACGTGCCGTTATCAATGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGT‑AGCAAAAACGGCAGGGG‑GATCGCCCCTGCCGTGGGa < 5:2915/149‑1 (MQ=255) gcCCGGCAGGCTGATGGTGCGGATGCCGGTGCGGTTTCCCTGCAACGTGCCGTTATCAATGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGT‑AGCAAAAACGGCAGGGG‑GATCGCCCCTGCCGTGGGATTAATCAgg > 7:245117/1‑149 (MQ=255) gcCCGGCAGGCTGATGGTGCGGATGCCGGTGCGGTTTCCCTGCAACGTGCCGTTATCAATGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGT‑AGCAAAAACGGCAGGGG‑GATCGCCCCTGCCGTGGGATTAATCAgg > 7:238937/1‑149 (MQ=255) cccGGCAGGCTGATGGTGCGGATGCCGGTGCGGTTTCCCTGCAACGTGCCGTTATCAATGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGT‑AGCAAAAACGGCAGGGG‑GATCGccc > 8:129897/1‑128 (MQ=255) cccGGCAGGCTGATGGTGCGGATGCCGGTGCGGTTTCCCTGCAACGTGCCGTTATCAATGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGT‑AGCAAAAACGGCAGGGG‑GATCGccc < 7:129897/128‑1 (MQ=255) ccGGCAGGCTGTTGGTGCGGATGCCGGTGCGGTTTCCCTGCAACGTGCCGTTATCAATGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGT‑AGCAAAAACGGCAGGGG‑GATCGCCCCTGCCGTGGGATTAATCAGGCg < 8:379634/149‑1 (MQ=255) ccGGCAGGCTGATGGTGCGGATGCCGGTGCGGTTTCCCTGCAACGTGCCGTTATCAATGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGT‑AGCAAAAACGGCAGGGG‑GATCGCCCCTGCCGTGGGATTAATCAGGCg > 7:346543/1‑149 (MQ=255) cGGCAGGCTGATGGTGCGGATGCCGGTGCGGTTTCCCTGCAACGTGCCTTTATCAATGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGT‑AGCAAAAACGGCAGGGG‑GATCGCCCCTGCCGTGGGATTAATCAGGCgg < 8:164892/149‑1 (MQ=255) cGGCAGGCTGATGGTGCGGATGCCGGTGCGGTTTCCCTGCAACGTGCCGTTATCAATGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGT‑AGCAAAAACGGCAGGGG‑GATCGCCCCTGCCGTGGGATTAATCAGGCgg < 8:45426/149‑1 (MQ=255) cGGCAGGCTGATGGTGCGGATGCCGGTGCGGTTTCCCTGCAACGTGCCGTTATCAATGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGT‑AGCAAAAACGGCAGGGG‑GATCGCCCCTGCCGTGGGATTAATCAGGCgg < 6:98013/149‑1 (MQ=255) aGGCTGATGGTGCGGATGCCGGTGCGGTTTCCCTGCAACGTGCCGTTATCAATGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGT‑AGCAAAAACGGCAGGGG‑GATCGCCCCTGCCGTGGGATTAATCAGGCGGGttt > 4:1733/1‑149 (MQ=255) tGATGGTGCGGATGCCGGTGCGGTTTCCCTGCAACGTGCCGTTATCAATGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGT‑AGCAAAAACGGCAGGGG‑GATCGccc > 6:147198/1‑118 (MQ=255) tGATGGTGCGGATGCCGGTGCGGTTTCCCTGCAACGTGCCGTTATCAATGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGT‑AGCAAAAACGGCAGGGG‑GATCGccc < 5:147198/118‑1 (MQ=255) aTGGTGCGGATGCCGGTGCGGTTTCCCTGCAACGTGCCGTTATCAATGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGT‑AGCAAAAACGGCAGGGG‑GATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCg > 1:252728/1‑148 (MQ=255) gTGCGGATGCCGGTGCGGTTTCCCTGCAACGTGCCGTTATCAATGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGT‑AGCAAAAACGGCAGGGG‑GATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAgg < 5:292470/149‑1 (MQ=255) tGCCGGTGCGGTTTCCCTGCAACGTGCCGTTATCAATGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGT‑AGCAAAAACGGCAGGGG‑GATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGa < 3:262923/149‑1 (MQ=255) ccGGTGCGGTTTCCCTGCAACGTGCCGTTATCAATGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGT‑AGCAAAAACGGCAGGGG‑GATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGAtt < 5:210510/149‑1 (MQ=255) tGCGGTTTCCCTGCAACGTGGCTTTATCATTGAGGTCGCGGACCAGGTCCAGTTACTGTTTCATTGCTTACCTGT‑AGCAAAAACGGCAGGGG‑GATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATaa < 4:309091/149‑1 (MQ=255) gCGGTTTCCCTGCAACGTGCCGTTATCAATGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGT‑AGCAAAAACGGCAGGGG‑GATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAg > 7:365743/1‑149 (MQ=255) cTGCAACGTGCCGTTATCAATGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGT‑AGCAAAAACGGCAGGGG‑GATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAg > 4:218369/1‑148 (MQ=255) gCAACGTGCCGTTATCAATGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGT‑AGCAAAAACGGCAGGGG‑GATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGAt > 7:170725/1‑148 (MQ=255) aaCGTGCCGTTATCAATGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGT‑AGCAAAAACGGCAGGGG‑GATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCaa < 4:105107/149‑1 (MQ=255) aCGTGCCGTTATCAATGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGT‑AGCAAAAACGGCAGGGG‑GATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATc > 1:18691/1‑146 (MQ=255) gCCGTTATCAATGACGTCGCGGACCAGGTCCAGTTACTGTTTCATGGCTTACCTGT‑AGCAAAAACGGCAGGGG‑GATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGACGa < 3:191515/149‑1 (MQ=255) ccGTTATCAATGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGT‑AGCAAAAACGGCAGGGG‑GATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGACGAg < 7:118809/149‑1 (MQ=255) ccGTTATCAATGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGT‑AGCAAAAACGGCAGGGG‑GATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGACGAg < 3:1733/149‑1 (MQ=255) cGTTATCAATGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGT‑AGCAAAAACGGCAGGGG‑GATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGACGAgg < 3:39991/149‑1 (MQ=255) cGTTATCAATGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGT‑AGCAAAAACGGCAGGGG‑GATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGACGAgg < 2:252728/149‑1 (MQ=255) gTTATCAATGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGT‑AGCAAAAACGGCAGGGG‑GATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGACGAGGc < 8:346543/149‑1 (MQ=255) cAATGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGT‑AGCAAAAACGGCAGGGG‑GATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGACGAGGCCAcc > 2:235818/1‑148 (MQ=255) aTGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGTGAGCAAAAACGGCAGGGG‑GATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGACGAGGCCACCg > 1:293452/1‑148 (MQ=255) aTGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGT‑AGCAAAAACGGCAGGGG‑GATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGa > 4:263081/1‑130 (MQ=255) aTGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGT‑AGCAAAAACGGCAGGGG‑GATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGACGAGGCCACCGAc < 8:365743/149‑1 (MQ=255) aCGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGT‑AGCAAAAACGGCAGGGG‑GATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGACGAGGCCACCGACTa < 3:218369/148‑1 (MQ=255) gTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGT‑AGCAAAAACGGCAGGGGCGATC‑CCCCTGcc < 1:365253/71‑1 (MQ=38) gTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGT‑AGCAAAAACGGCAGGGGCGATC‑CCCCTGcc > 2:365253/1‑71 (MQ=38) gTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGT‑AGCAAAAACGGCAGGGG‑GATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGACGAGGCCACCGACTatca > 8:308171/1‑149 (MQ=255) gACCAGGTCCAGATACTGTTTCATGGCTTACCTGT‑AGCAAAAACGGCAGGGG‑GATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGACGAGGCCACCGACTATCATCGGaa < 1:182976/149‑1 (MQ=255) ggTCCAGATACTGTTTCATGGCTTACCTGT‑AGCAAAAACGGCAGGGG‑GATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGACGAGGCCACCGACTatcatc > 2:41427/1‑140 (MQ=255) ggTCCAGATACTGTTTCATGGCTTACCTGT‑AGCAAAAACGGCAGGGG‑GATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGACGAGGCCACCGACTatcatc < 1:41427/140‑1 (MQ=255) gATACTGTTTCATGGCTTACCTGT‑AGCAAAAACGGCAGGGG‑GATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGACGAGGCCACCGACTATCATCGGAATGCACAGCAAc > 3:32092/1‑149 (MQ=255) cTGTTTCATGGCTTACCTGT‑AGCAAAAACGGCAGGGG‑GATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGACGAGGCCACCGACTATCATCGGAATGCACAGCAACTgg < 4:32092/148‑1 (MQ=255) tGTTTCATGGCTTACCTGT‑AGCAAAAACGGCAGGGG‑GATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGACGAGGCCACCGACTATCATCGGAATg < 1:341709/135‑1 (MQ=255) tGTTTCATGGCTTACCTGT‑AGCAAAAACGGCAGGGG‑GATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGACGAGGCCACCGACTATCATCGGAATg > 2:341709/1‑135 (MQ=255) tGTTTCATGGCTTACCTGT‑AGCAAAAACGGCAGGGG‑GATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGACGAGGCCACCGACTATCATCGGAATGCACAGCAACTGGcc > 6:351718/1‑149 (MQ=255) tttCATGGCTTACCTGT‑AGCAAAAACGGCAGGGG‑GATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGACGAGGCCACCGACTATCATCGGAATGca > 7:232245/1‑135 (MQ=255) tttCATGGCTTACCTGT‑AGCAAAAACGGCAGGGG‑GATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGACGAGGCCACCGACTATCATCGGAATGca < 8:232245/135‑1 (MQ=255) cATTGCTTACCTGT‑AGCAAAAACGGCAGGGG‑GATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGACGAGGCCACCGACTATCATCGGAATGCACAGCAACTGGCCTtga < 7:298762/148‑1 (MQ=255) cATGGCTTACCTGT‑AGCAAAAACGGCAGGGG‑GATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGACGAGGCCACCGACTATCATCGGAATGCACAGCAACTGGCCTtgag > 8:195736/1‑149 (MQ=255) aTGGCTTACCTGT‑AGCAAAAACGGCAGGGG‑GATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGACGAGGCCTCCGACTATCATCGGAATGCACAGCAACTGGCCTtgagt < 5:351718/149‑1 (MQ=255) aTGGCTTACCTGT‑AGCAAAAACGGCAGGGG‑GATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGACGAGGCCACCGACTATCATCGGAATGCACAGCAACTGGCCTtgagt < 8:170725/149‑1 (MQ=255) aTGGCTTACCTGT‑AGCAAAAACGGCAGGGG‑GATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGACGAGGCCACCGACTATCATCGGAATGCACAGCAACTGGCCTtgag < 7:128484/148‑1 (MQ=255) gCTTACCTGT‑AGCAAAAACGGCAGGGG‑GATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGACGAGGCCACCGACTATCATCGGAATGCACAGCAACTGGCCTtgagtga < 7:195736/148‑1 (MQ=255) ccTGT‑AGCAAAAACGGCAGGGG‑GATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGACGAGGCCACCGACTATCATCGGAATGCACAGCAACTGGCCTTGAGTGagccagc < 1:235818/149‑1 (MQ=255) cTGT‑AGCAAAAACGGCAGGGG‑GATCGCCCCTGCCGTGGGATTAATCAGGCg < 1:88728/51‑1 (MQ=255) cTGT‑AGCAAAAACGGCAGGGG‑GATCGCCCCTGCCGTGGGATTAATCAGGCg > 2:88728/1‑51 (MQ=255) t‑AGCAAAAACGGCAGGGG‑GATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGACGAGGCCACCGACTATCATCGGAATGCACAGCAACTGGCCTtgag < 5:265625/136‑1 (MQ=255) t‑AGCAAAAACGGCAGGGG‑GATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGACGAGGCCACCGACTATCATCGGAATGCACAGCAACTGGCCTtgag > 6:265625/1‑136 (MQ=255) aaaaCGGCAGGGG‑GATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGACGAGGCCACCGACTATCATCGGAATGCACAGCAACTGGCCTTGAGTGAGCCAGCCGAACGCGa > 3:127417/1‑149 (MQ=255) ccaCGGCAGGGGCGATC‑CCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGACGAGGCCACCGACTATCATCGGAATGCACAGCAACTGGCCTTGAGTGAGCCAGCCGAACGCGAt > 5:178349/3‑149 (MQ=255) cAGGGG‑GATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGACGAGGCCACCGACTATCATCGGAATGCACAGCAACTGGCCTTGAGTGAGCCAGCCGAACGCGATGTAAcc < 1:257036/149‑1 (MQ=255) cAGGGG‑GATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGACGAGGCCACCGACTATCATCGGAATGCACAGCAACTGGCCTTGAGTGAGCCAGCCGAACGCGATGTAAcc > 2:257036/1‑149 (MQ=255) aGGGG‑GATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGACGAGGCCACCGACTATCATCGGAATGCACAGCAACTGGCCTTGAGTGagccag > 2:49106/1‑131 (MQ=255) g‑gATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGACGAGGCCACCGACTATCATCGGAATGCACAGCAACTGGCCTTGAGTGAGCCAGCCGAACGCGATGTAACCGAGtt < 2:293452/149‑1 (MQ=255) | GCAGGTCGAAACGCAGCATCGCGCCCGGCAGGCTGATGGTGCGGATGCCGGTGCGGTTTCCCTGCAACGTGCCGTTATCAATGACGTCGCGGACCAGGTCCAGATACTGTTTCATGGCTTACCTGT‑AGCAAAAACGGCAGGGG‑GATCGCCCCTGCCGTGGGATTAATCAGGCGGGTTTCGCCGTAGGCTTGCGATTATAAGCCCACCAGATCAAGACGAGGCCACCGACTATCATCGGAATGCACAGCAACTGGCCTTGAGTGAGCCAGCCGAACGCGATGTAACCGAGTT > NC_002947/5867591‑5867881 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |