| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 715,009:1 | +T | 6.8% | intergenic (+75/+2) | ispH → / ← PP_0607 | 4‑hydroxy‑3‑methylbut‑2‑enyl diphosphate reductase/type IV pili biogenesis protein FimT |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 715,009 | 1 | . | T | 6.8% | 289.9 / 16.0 | 73 | intergenic (+75/+2) | ispH/PP_0607 | 4‑hydroxy‑3‑methylbut‑2‑enyl diphosphate reductase/type IV pili biogenesis protein FimT |
| Reads supporting (aligned to +/- strand): ref base . (34/34); new base T (2/3); total (36/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CTGGACGGGCGCGAAGAGAACATCACCTTTTCAATGCCCAAAGAGCTGCGGGTTCGCTCGCTGATCTGACGGGCAGTA‑‑CCGCCGCCAATGCAGGGGCTGCTTTGCAGCCCTTGCGCGACACAAGACCGCTCCTGCAATGACCGC‑GCTAGCAGCGGTCATTGCTCAGGTCCTCCGTAAGCAACCTGACTCTGCCGCTTGATGCCAGCACCACCTGATATCGGCTGCGAGCAGCGGCGCGTTCGCACATTTCCAGTTTTGCGCCCAACCAGCTGTTGCCCGACGTCATGGG > NC_002947/714866‑715154 | cTGGACGGGCGCGAAGAGAACATCACCTTTTCAATGCCCAAAGAGCTGCGGGTTCGCTCGCTGATCTGACGGGCAGTA‑‑CCGCCGCCAATGCAGGGGCTGCTTTGCAGCCCTTGCGCGACACAAGACCGCTCCTGCAATGACCGC‑GCTag > 6:104177/1‑149 (MQ=255) gaggggCGCTAAGAGAACATCACCTTTTCATTGCCAAAAGAGCTGCGGGTTCGCTCGCTTATCTGAGGGGATTTACTCCTCCGCCAATGCAGGGGCTGCTTTGCAGCCCTTGCGCGACACAAGACCGCTCCTGCAATGACCGC‑GCTag < 1:125626/145‑1 (MQ=255) gAAGAGAACATCACCTTTTCAATGCCCAAAGAGCTGCGGGTTCGCTCGCTGATCTGACGGGCAGTA‑‑CCGCCGCCAATGCAGGGGCTGCTTTGCAGCCCTTGCGCGACACAAGACCGCTCCTGCAATGACCGC‑GCTAGCAGCTGTCATTg < 1:87111/149‑1 (MQ=255) agagAACATCACCTTTTCAATGCCCAAAGAGCTGCGGGTTCGCTCGCTGATCTGACGGGCAGTA‑‑CCGCCGCCAATGCAGGGGCTGCTTTGCAGCCCTTGCGCGACACAAGACCGCTCCTGCAATGACCGCTGCTAGC‑GCGGTCATTGca < 7:345853/149‑2 (MQ=255) gagaACATCACCTTTTCAATGCCCAAAGAGCTGCGGGTTCGCTCGCTGATCTGACGGGCAGTA‑‑CCGCCGCCAATGCAGGGGCTGCTTTGCAGCCCTTGCGCGACACAAGACCGCTCCTGCAATGACCGCTGCTAGC‑GCGGTCATTGcag < 4:213458/149‑3 (MQ=255) gagaACATCACCTTTTCAATGCCCAAAGAGCTGCGGGTTCGCTCGCTGATCTGACGGGCAGTA‑‑CCGCCGCCAATGCAGGGGCTGCTTTGCAGCCCTTGCGCGACACAAGACCGCTCCTGCAATGACCGC‑GCTAGCAGCGGTCATTGCt > 7:88242/1‑148 (MQ=255) gagaACATCACCTTTTCAATGCCCAAAGAGCTGCGGGTTCGCTCGCTGATCTGACGGGCAGTA‑‑CCGCCGCCAATGCAGGGGCTGCTTTGCAGCCCTTGCGCGACACAAGACCGCTCCTGCAATGACCGC‑GCTAGCAGCGGTCATTGCt > 7:220441/1‑148 (MQ=255) gaACATCACCTTTTCAATGCCCAAAGAGCTGCGGGTTCGCTCGCTGATCTGACGGGCAGTA‑‑CCGCCGCCAATGCAGGGGCTGCTTTGCAGCCCTTGCGCGACACAAGACCGCTCCTGCAATGACCGC‑GCTAGCAGCGGTCATTGCTCAg < 1:405594/149‑1 (MQ=255) gaACATCACCTTTTCAATGCCCAAAGAGCTGCGGGTTCGCTCGCTGATCTGACGGGCAGTA‑‑CCGCCGCCAATGCAGGGGCTGCTTTGCAGCCCTTGCGCGACACAAGACCGCTCCTGCAATGACCGC‑GCTAGCAGCGGTCATTGCTCAg < 5:331833/149‑1 (MQ=255) gaACATCACCTTTTCAATGCCCAAAGAGCTGCGGGTTCGCTCGCTGATCTGACGGGCAGTA‑‑CCGCCGCCAATGCAGGGGCTGCTTTGCAGCCCTTGCGCGACACAAGACCGCTCCTGCAATGACCGC‑GCTAGCAGCGGTCATTGCTCAg < 5:104177/149‑1 (MQ=255) aaCATCACCTTTTCAATGCCCAAAGAGCTGCGGGTTCGCTCGCTGATCTGACGGACAGTA‑‑CCGCCGCCAATGCAGGGGCTGCTTTGCAGCCCTTGCGCGACACAAGACCGCTCCTGCAATGACCGC‑GCTAGCAGCGGTCATTGCTCAgg > 2:374399/1‑149 (MQ=255) cATCACCTTTTCAATGCCCAAAGAGCTGCGGGTTCGCTCGCTGATCTGACGGGCAGTA‑‑CCGCCGCCAATGCAGGGGCTGCTTTGCAGCCCTTGCGCGACACAAGACCGCTCCTGCAATGACCGC‑GCTAGCAGCGGTCATTGCTCAGGtc < 3:158749/149‑1 (MQ=255) tCACCTTTTCAATGCCCAAAGAGCTGCGGGTTCGCTCGCTGATCTGACGGGCAGTA‑‑CCGCCGCCAATGCAGGGGCTGCTTTGCAGCCCTTGCGCGACACAAGACCGCTCCTGCAATGACCGC‑GCTAGCAGCGGTCATTGCTCAGGtcct > 8:295818/1‑149 (MQ=255) cACCTTTTCAATGCCCAAAGAGCTGCGGGTTCGCTCGCTGATCTGACGGGCAGTA‑‑CCGCCGCCAATGCAGGGGCTGCTTTGCAGCCCTTGCGCGACACAAGACCGCTCCTGCAATGACCGC‑GCTAGCAGCGGTCATTGCTCAGGtcctc > 2:576/1‑149 (MQ=255) aCCTTTTCAATGCCCAAAGAGCTGCGGGTTCGCTAGCTGATCTGACGGGCAGTA‑‑CCGCCGCCAATGCAGGGGCTGCTTTGCAGCCCTTGCGCGACACAAGACCGCTCCTGCAATGACCGC‑GCTAGAAGCGGTCATTGCTCAGGtcct > 3:128917/1‑147 (MQ=255) ccTTTTCAATGCCCAAAGAGCTGCGGGTTCGCTCGCTGATCTGACGGGCAGTA‑‑CCGCCGCCAATGCAGGGGCTGCTTTGCAGCCCTTGCGCGACACAAGACCGCTCCTGCAATGACCGT‑GCTAGCAGCGGTCATTGCTCAGGTCCTCCg < 1:243208/149‑1 (MQ=255) cTTTTCAATGCCCAAAGAGCTGCGGGTTCGCTCGCTGATCTGACGGGCAGTA‑‑CCGCCGCCAATGCAGGGGCTGCTTTGCAGCCCTTGCGCGACACAAGACCGCTCCTGCAATGACCGC‑GCTAGCAGCGGTCATTGCTCAGGTCCTCCg > 5:340998/1‑148 (MQ=255) ttCAATGCCCAAAGAGCTGCGGGTTCGCTCGCTGATCTGACGGGCAGTA‑‑CCGCCGCCAATGCAGGGGCTGCTTTGCAGCCCTTGCGCGACACAAGACCGCTCCTGCAATGACCGC‑GCTAGCAGCGGTCATTGCTCAGGTCCTCCGTaa < 1:576/148‑1 (MQ=255) cccAAAGAGCTGCGGGTTCGCTCGCTGATCTGACGTGCAGTA‑‑CCGCCGCCAATGCAGGGGCTGCTTTGCAGCCCTTGCGCGACACAAGACCGCTCCTGCAATGACCGA‑GCTAGCAGCGGTCATTGCTCAGGTCCTCCGTAAGCAACCt < 7:50201/148‑1 (MQ=255) cAAAGAGCTGCGGGTTCGCTCGCTGATCTGACGGGCAGTA‑‑CCGCCGCCAATGCAGGGGCTGCTTTGCAGCCCTTGCGCGACACAAGACCGCTCCTGCAATGACCGC‑GCTAGCCGCGGTCATTGCGAAGGTCCACCGTAAGCAcccatac > 2:328920/1‑145 (MQ=255) gagCTGCGGGTTCGCTCGCTGATCTGACGGGCAGTA‑‑CCGCCGCCAATGCAGGGGCTGCTTTGCAGCCCTTGCGCGACACAAGACCGCTCCTGCAATGACCGC‑GCTAGCAGCGGTCATTGCTCAGGTCCTCCGTAAGCAACCTGACTCTg < 8:60136/149‑1 (MQ=255) gctgctGGTTCGCTCGCTGTTCTGACGGGCAGTA‑‑GCGCCGCCTATGCAGGGGGTGCTTTGCAGCCCTTGCGCGACAGAAGACCGCTCCTGGAATGACCGC‑GCTAGCAGCGGTCATTGGTGAGGTCGTCCGTAAGGAAGCTGACTCTGc < 2:391115/148‑1 (MQ=255) gCTGCGGGTTCGCTCGCTGATCTGACGGGCAGTA‑‑CCGCCGCCAATGCAGGGGCTGCTTTGCAGCCCTTGCGCGACACAAGACCGCTCCTGCAATGACCGC‑GCTAGCAGCGGTCATTGCTCAGGTCCTCCGTAAGCAACCTGACTCTGcc < 3:39944/149‑1 (MQ=255) gCTGCGGGTTCGCTCGCTGATCTGACGGGCAGTA‑‑CCGCCGCCAATGCAGGGGCTGCTTTGCAGCCCTTGCGCGACACAAGACCGCTCCTGCAATGACCGC‑GCTAGCAGCGGTCATTGCTCAGGTCCTCCGTAAGCAACCTGACTCTGcc > 1:27843/1‑149 (MQ=255) gCGGGTTCGCTCGCTGATCTGACGGGCAGTA‑‑CCGCCGCCAATGCAGGGGCTGCTTTGCAGCCCTTGCGCGACACAAGACCGCTCCTGCAATGACCGC‑GCTAGCAGCGGTCATTGCTCAGGTCCTCCGTAAGCAACCTGACTCTGCCGCt > 5:293070/1‑149 (MQ=255) cGGGTTCGCTCGCTGATCTGACGGGCAGTA‑‑CCGCCGCCAATGCAGGGGCTGCTTTGCAGCCCTTGCGCGACACAAGACCGCTCCTGCAATGACCGC‑GCTAGCAGCGGTCATTGCTCAGGTCCTCCGTAAGCAACCTGACTCTGCCGCtt < 6:340998/149‑1 (MQ=255) cGGGTTCGCTCGCTGATCTGACGGGCAGTA‑‑CCGCCGCCAATGCAGGGGCTGCTTTGCAGCCCTTGCGCGACACAAGACCGCTCCTGCAATGACCGC‑GCTAGCAGCGGTCATTGCTCAGGTCCTCCGTAAGCAACCTGACTCTGCCGCt < 8:220441/148‑1 (MQ=255) gggTTCGCTCGCTGATCTGACGGGCAGTA‑‑CCGCCGCCAATGCAGGGGCTGCTTTGCAGCCCTTGCGCGACACAAGACCGCTCCTGCAATGACCGC‑GCTAGCAGCGGTCATTGCTCAGGTCCTCCGTAAGCAACCTGACTCTGCCGCTTg < 7:295818/149‑1 (MQ=255) gTTCGCTCGCTGATCTGACGGGCAGTA‑‑CCGCCGCCAATGCAGGGGCTGCTTTGCAGCCCTTGCGCGACACAAGACCGCTCCTGCAATGACCGC‑GCTAGCAGCGGTCATTGCTCAGGTCCTCCGTAAGCAACCTGACTCTGCCGCTTGAt < 6:157427/149‑1 (MQ=255) gTTCGCTCGCTGATCTGACGGGCAGTA‑‑CCGCCGCCAATGCAGGGGCTGCTTTGCAGCCCTTGCGCGACACAAGACCGCTCCTGCAATGACCGC‑GCTAGCAGCGGTCATTGCTCAGGTCCTCCGTAAGCAACCTGACTCTGCCGCTTGAt < 3:146385/149‑1 (MQ=255) cgcgcgctGATCTGACGGGCAGTA‑‑CCGCCGCCAATGCAGGGGCTGCTTTGCAGCCCTTGCGCGACACAAGACCGCTCCTGCAATGACCGC‑GCTAGCAGCGGTCATTGCTCAGGTCCTCCGTAAGCAACCTGACTCTGCCGCTTGATGc < 2:290422/148‑1 (MQ=255) ctcgctGATCTGACGGACAGTA‑‑CCGCCGCCAATGCAGGGGCTGCTTTGCAGCCCTTGCGCGACACAAGACCGCTCCTGCAATGACCGC‑GCTAGCAGCGGTCATTGCTCAGGTCCTCCGTAAGCAACCTGACTCTGCCGCTTGATGCCAg < 1:374399/149‑1 (MQ=255) tcgctGATCTGACGGGCAGTA‑‑CCGCCGCCAATGCAGGGGCTGCTTTGCAGCCCTTGCGCGACACAAGACCGCTCCTGCAATGACCGC‑GCTAGCAGCGGTCATTGCTCAGGTCCTCCGTAAGCAACCTGACTCTGCCGCTTGATGCCAg > 2:346672/1‑148 (MQ=255) tGACGGGCAGTA‑‑CCGCCGCCAATGCAGGGGCTGCTTTGCAGCCCTTGCGCGACACAAGACCGCTCCTGCAATGACCGCTGCTAGC‑GCGGTCATTGcaggag > 6:64203/1‑96 (MQ=37) tGACGGGCAGTA‑‑CCGCCGCCAATGCAGGGGCTGCTTTGCAGCCCTTGCGCGACACAAGACCGCTCCTGCAATGACCGCTGCTAGC‑GCGGTCATTGcaggag < 5:64203/101‑6 (MQ=37) aCGGGCAGTA‑‑CCGCCGCCAATGCAGGGGCTGCTTTGCAGCCCTTGCGCGACACAAGACCGCTCCTGCAATGACCGC‑GCTAGCAGCGGTCATTGCTCAGGTCCTCCGTAAGCAACCTGACTCTGCCGCTTGATGCCAGCACCACCTGata > 6:101591/1‑149 (MQ=255) tA‑‑CCGCCGCCAATGCAGGGGCTGCTTTGCAGCCCTTGCGCGACACAAGACCGCTCCTGCAATGACCGC‑GCTAGCAGCGGTCATTGCTCAGGTCCTCCGTAAGCAACCTGACTCTGCCGCTTGATGCCAGCACCACCTGATATCGGCTGc > 6:263053/1‑149 (MQ=255) ccgccgCCAATGCAGGGGCTGCTTTGCAGCCCTTGCGCGACACAAGACCGCTCCTGCAATGACCGC‑GCTAGCAGCGGTCATTGCTCAGGTCCTCCGTAAGCAACCTGACTCTGCCGCTTGATGCCAGCACCACCTGATATCGGCTGc > 5:206061/1‑147 (MQ=255) ccgccgCCAATGCAGGGGCTGCTTTGCAGCCCTTGCGCGACACAAGACCGCTCCTGCAATGACCGC‑GCTAGCAGCGGTCATTGCTCAGGTCCTCCGTAAGCAACCTGACTCTGCCGCTTGATGCCAGCACCACCTGATATCGGCTGCGa < 5:263053/149‑1 (MQ=255) cgccgcCAATGCAGGGGCTGCTTTGCAGCCCTTGCGCGACACAAGACCGCTCCTGCAATGACCGC‑GCTAGCAGCGGTCATTGCTCAGGTCCTCCGTAAGCAACCTGACTCTGCCGCTTGATGCCAGCGCCACCTGATATCGGCTGCGag > 6:206627/1‑149 (MQ=255) cgccgcCAATGCAGGGGCTGCTTTGCAGCCCTTGCGCGACACAAGACCGCTCCTGCAATGACCGC‑GCTAGCAGCGGTCATTGCTCAGGTCCTCCGTAAGCAACCTGACTCTGCCGCTTGATGCCAGCACCACCTGATATCGGCTGCGag > 7:292526/1‑149 (MQ=255) cgccgcCAATGCAGGGGCTGCTTTGCAGCCCTTGCGCGACACAAGACCGCTCCTGCAATGACCGC‑GCTAGCAGCGGTCATTGCTCAGGTCCTCCGTAAGCAACCTGACTCTGCCGCTTGATGCCAGCACCACCTGATATCGGCTGCGag < 6:293070/149‑1 (MQ=255) cgccgcCAATGCAGGGGCTGCTTTGCAGCCCTTGCGCGACACAAGACCGCTCCTGCAATGACCGC‑GCTAGCAGCGGTCATTGCTCAGGTCCTCCGTAAGCAACCTGACTCTGCCGCTTGATGCCAGCACCACCTGATATCGGCTGCGag < 8:276734/149‑1 (MQ=255) gccgccAATGCAGGGGCTGCTTTGCAGCCCTTGCGCGACACAAGACCGCTCCTGCAATGACCGC‑GCTAGCAGCGGTCATTGCTCAGGTCCTCCGTAAGCAACCTGActct < 7:95150/110‑1 (MQ=255) gccgccAATGCAGGGGCTGCTTTGCAGCCCTTGCGCGACACAAGACCGCTCCTGCAATGACCGC‑GCTAGCAGCGGTCATTGCTCAGGTCCTCCGTAAGCAACCTGActct > 8:95150/1‑110 (MQ=255) ccgccAATGCAGGGGCTGCTTTGCAGCCCTTGCGCGACACAAGACCGCTCCTGCAATGACCGC‑GCTAGCAGCGGTCATTGCTCAGGTCCTCCGTAAGCAACCTGACTCTGCCGCTTGATGCCAGCACCACCTGATATCGGCTGCGag > 8:67859/1‑147 (MQ=255) aaTGCAGGGGCTGCTTTGCAGCCCTTGCGCGACACAAGACCGCTCCTGCAATGACCGC‑GCTAGCAGCGGTCATTGCTCAGGTCCTCCGTAAGCAACCTGACTCTGCCGCTTGATGCCATCACCACCTGATATCGGCTGCGAGCAgcggc > 4:124305/1‑149 (MQ=255) aagggCTGCAAAGCAGCCCTTGCGCGACACAAGACCGCTCCTGCAATGACCGC‑GCTAGCAGCGGTCATTGCTCAGGTCCTCCGTAAGCAACCTGACTCTGCCGCTTGATGCCAGCACCACCTGATATCGGCTGCGAGCAGCGGCGCGtt > 2:289336/3‑149 (MQ=255) gctgctTTGCAGCCCTTGCGCGACACAAGACCGCTCCTGCAATGACCGC‑GCTAGCAGCGGTCATTGCTCAGGTCCTCCGTAAGCAACCTGACTCTGCCGc < 3:375078/100‑1 (MQ=255) gctgctTTGCAGCCCTTGCGCGACACAAGACCGCTCCTGCAATGACCGC‑GCTAGCAGCGGTCATTGCTCAGGTCCTCCGTAAGCAACCTGACTCTGCCGc > 4:375078/1‑100 (MQ=255) tttGCAGCCCTTGCGCGACACAAGACCGCTCCTGCAATGACCGC‑GCTAGCAGCGGTCATTGCTCAGGTCCTCCGTAAGCAACCTGACTCTGCCGCTTGATGCCAGCACCACCTGATATCGGCTGCGAGCAGCGGCGCGTTCGCACAtt > 5:46316/1‑148 (MQ=255) gCAGCCCTTGCGCGACACAAGACCGCTCCTGCAATGACCGC‑GCTAGCAGCGGTCATTGCTCAGGTCCTCCGTAAGCAACCTGACTCTGCCGCTTGATGCCAGCACCACCTGATATCGGCTGCGAGCAGCGGCGCGTTCGCACATTTc > 7:12224/1‑147 (MQ=255) gCCCTTGCGCGACACAAGACCGCTCCTGCAATGACCGC‑GCTAGCAGCGGTCATTGCTCAGGTCCTCCGTAAGCAACCTGACTCTGCCGCTTGATGCCAGCACCACCTGATATCGGCTGCGAGCAGCGGCGCGTTCGCACATTTCCAGtt < 2:59509/149‑1 (MQ=255) cccTTGCGCGACACAAGACCGCTCCTGCAATGACCGC‑GCTAGCAGCGGTCATTGCTCAGGTCCTCCGTAAGCAACCTGACTCTGCCGCTTGATg < 2:268006/94‑1 (MQ=255) cccTTGCGCGACACAAGACCGCTCCTGCAATGACCGC‑GCTAGCAGCGGTCATTGCTCAGGTCCTCCGTAAGCAACCTGACTCTGCCGCTTGATg > 1:268006/1‑94 (MQ=255) cccTTGCGCGACACAAGACCGCTCCTGCAATGACCGC‑GCTAGCAGCGGTCATTGCTCAGGTCCTCCGTAAGCAACCTGACTCTGCCGCTTGATGCCAGCACCACCTGATATCGGCTGCGAGCAGCGGCGCGTTCGCACATTTCCAGttt < 2:27843/149‑1 (MQ=255) ccTTGCGCGACACAAGACCGCTCCTGCAATGACCGC‑GCTAGCAGCGGTCATTGCTCAGGTCCTCCGTAAGCAACCTGACTCTGCCGCTTGATGCCAGCACCACCTGATATCGGCTGCGAGCAGCGGCGCGTTCGCACATTTCCAGtttt < 6:206061/149‑1 (MQ=255) ccTTGCGCGACACAAGACCGCTCCTGCAATGACCGC‑GCTAGCAGCGGTCATTGCTCAGGTCCTCCGTAAGCAACCTGACTCTGCCGCTTGATGCCAGCACCACCTGATATCGGCTGCGAGCAGCGGCGCGTTCGCACATTTCCAGtttt < 4:128917/149‑1 (MQ=255) cTTGCGCGACACAAGACCGCTCCTGCAATGACCGC‑GCTAGCAGCGGTCATTGCTCAGGTCCTCCGTAAGCAACCTGACTCTGCCGCTTGATGCCAGCACCACCTGATATCGGCTGCGAGCAGCGGCGCGTTCGCACATTTCCAGTTTTg < 3:124305/149‑1 (MQ=255) gACACAAGACCGCTCCTGCAATGACCGC‑GCTAGCAGCGGTCATTGCTCAGGTCCTCCGTAAGCAACCTGACTCTGCCGCTTGATGCCAGCACCACCTGATATCGGCTGCGAGCAGCGGCGCGTTCGCACATTTCCAGTTTTGCGCCCaa > 6:242676/1‑149 (MQ=255) acaAGACCGCTCCTGCAATGACCGC‑GCTAGCAGAGGTCATTGCTCAGGAGCTGCGTAAGCTACCTGACTCTGCCGCTTGATGCCAGCGCGACGTGATTTCGGCTGCGAGCAGCGGCGCGTTGGGGCATTTCGAGTGTTTCGCCCaaa > 8:221933/1‑146 (MQ=255) aaGACCGCTCCTGCAATGACCGC‑GCTAGCAGCGGTCATTGCTCAGGTCCTCCGTAAGCAACCTGACTCTGCCGCTTGATGCCAGCACCACCTGATATCGGCTGCGAGCAGCGGCGCGTTCGCACATTTCCAGTTTTGCGCCCAACCAGc > 8:89105/1‑149 (MQ=255) aGACCGCTCCTGCAATGACCGC‑GCTAGCAGCGGTCATTGCTCAGGTCCTCCGTAAGCAACCTGACTCTGCCGCTTGATGCCAGCACCACCTGATATCGGCTGCGAGCAGCGGCGCGTTCGCACATTTCCAGTTTTGCGCCCAACCAGCt > 7:93930/1‑149 (MQ=255) aCCGCTCCTGCAATGACCGC‑GCTAGCAGCGGTCATTGCTCAGGTCCTCCGTAAGCAACCTGACTCTGCCGCTTGATGCCAGCACCACCTGATATCGGCTGCGAGCAGCGGCGCGTTCGCACATTTCCAGTTTTGCGCCCAACCAGCTGt > 2:302141/1‑149 (MQ=255) gCTCCTGCAATGACCGC‑GCTAGCAGCGGTCATTGCTCAGGTCCTCCGTAAGCAACCTGACTCTGCCGCTTGATGCCAGCACCACCTGATATCGGCTGCGAGCAGCGGCGCGTTCGCACATTTCCAGTTTTGCGCCCAACCAGCTGTTGc < 5:101591/149‑1 (MQ=255) tCCTGCAATGACCGC‑GCTAGCAGCGGTCATTGCTCAGGTCCTCCGTAAGCAACCTGACTCTGCCGCTTGATGCCAGCACCACCTGATATCGGCTGCGAGCAGCGGCGCGTTCGCACATTTCCAGTTTTGCGCCCAACCAGCTGTTGccc > 4:198553/1‑149 (MQ=255) cTGCAATGACCGC‑GCTAGCAGCGGTCATTGCTCAGGTCCTCCGTAAGCAACCTGACTCTGCCGCTTGATGCCAGCACCACCTGATATCGGCTGCGAGCAGCGGCGCGTTCGCACATTTCCAGTTTTGCGCCCAACCAGCTGTTGCCCg < 6:46316/148‑1 (MQ=255) aaTGACCGC‑GCTAGCAGCGGTCATTGCTCAGGTCCTCCGTAAGCAACCTGACTCTGCCGCTTGATGCCAGCACCACCTGATATCGGCTGCGAGCAGCGGCGCGTTCGCACATTTCCAGTTTTGCGCCCAACCAGCTGTTGCCCGACGt > 6:272157/1‑148 (MQ=255) tGACCGC‑GCTAGCAGCGGTCATTGCTCAGGTCCTCCGTAAGCAACCTGACTCTGCCGCTTGATGCCAGCACCACCTGATATCGGCTGCGAGCAGCGGCGCGTTCGCACATTTCCAGTTTTGCGCCCAACCAGCTGTTGCCCGACGTCAt > 1:348148/1‑149 (MQ=255) gACCGCTGCTAGC‑GCGGTCATTGCTCAGGTCCTCCGTAAGCAACCTGACTCTGCCGCTTGATGCCAGCACCACCTGATATCGGCTGCGAGCAGCGGCGCGTTCGCACATTTCCAGTTTTGCGCCCAACCAGCTGTTGCCCGACGTCATg > 6:370698/1‑149 (MQ=255) aCCGC‑GCTAGCAGCGGTCATTGCTCAGGTCCTCCGTAAGCAACCTGACTCTGCCGCTTGATGCCAGCACCACCTGATATCGGCTGCGAGCAGCGGCGCGTTCGCACATTTCCAGTTTTGCGCCCAACCAGCTGTTGCCCGACGTCATgg < 2:55070/149‑1 (MQ=255) ccGC‑GCTAGCAGCGGTCATTGCTCAGGTCCTCCGTAAGCAACCTGACTCTGCCGCTTGATGCCAGc < 7:373026/66‑1 (MQ=255) ccGC‑GCTAGCAGCGGTCATTGCTCAGGTCCTCCGTAAGCAACCTGACTCTGCCGCTTGATGCCAGc > 8:373026/1‑66 (MQ=255) cgc‑gCTAGCAGCGGTCATTGCTCAGGTCCTCCGTAAGCAACCTGACTCTGCCGCTTGATGCCAGCACCACCTGATATCGGCTGCGAGCAGCGGCGCGTTCGCACATTTCCAGTTTTGCGCCCAACCAGCt < 5:283641/130‑1 (MQ=255) cgc‑gCTAGCAGCGGTCATTGCTCAGGTCCTCCGTAAGCAACCTGACTCTGCCGCTTGATGCCAGCACCACCTGATATCGGCTGCGAGCAGCGGCGCGTTCGCACATTTCCAGTTTTGCGCCCAACCAGCt > 6:283641/1‑130 (MQ=255) cgc‑gCTAGCAGCGGTCATAGCTCAGGTCCTCCGTAAGCAACCTGACTCTGCCGCTTGATGCCAGCACCACCTGATATCGGCTGCGAGCAGCGGCGCGTTCGCACATTTCCAGTTTTGCGCCCAACCAGCTGTTGCCCGACGTCATggg > 6:150461/1‑148 (MQ=255) | CTGGACGGGCGCGAAGAGAACATCACCTTTTCAATGCCCAAAGAGCTGCGGGTTCGCTCGCTGATCTGACGGGCAGTA‑‑CCGCCGCCAATGCAGGGGCTGCTTTGCAGCCCTTGCGCGACACAAGACCGCTCCTGCAATGACCGC‑GCTAGCAGCGGTCATTGCTCAGGTCCTCCGTAAGCAACCTGACTCTGCCGCTTGATGCCAGCACCACCTGATATCGGCTGCGAGCAGCGGCGCGTTCGCACATTTCCAGTTTTGCGCCCAACCAGCTGTTGCCCGACGTCATGGG > NC_002947/714866‑715154 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |