| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,344,688:1 | +C | 8.0% | intergenic (‑39/+36) | PP_2061 ← / ← PP_2062 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,344,688 | 1 | . | C | 8.0% | 289.3 / 17.9 | 75 | intergenic (‑39/+36) | PP_2061/PP_2062 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base . (34/35); new base C (2/4); total (36/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.76e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.76e-01 | |||||||||||
TCGTCGACAATAAATACCCCGTTCTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTTATAAAGCTTTTGGCATCCTTGAGTTCGGTTTTAAGGTGTTTGG > NC_002947/2344543‑2344836 | tcgtcgACAATAAATACCCCGTTCTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑Ttc > 2:106377/1‑149 (MQ=255) tcgACAATAAATACCCCGTTCTCATAGGCGATATAAGCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑Ttcgtc > 8:357930/1‑149 (MQ=255) gACAATAAATACCCCGTTCTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGc < 3:30623/149‑1 (MQ=255) gACAATAAATACCCCGTTCTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGc < 7:48568/149‑1 (MQ=255) gACAATAAATACCCCGTTCTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGACGAA‑ACGACCCTGGTCGTCTTCGgcgc < 4:248396/149‑1 (MQ=255) gACAATAAATACCCCGTTCTCATAGGCGATATAAACCGCAGCTCTAACGTTATTGCTGGAATTGAAATTCCACATTTCAGCTCCGCTTGCGTGAGTATTCAAGAGGGAGTCAGTAGAGGCGCCAAAGACGACCAGGGTCGT‑TTCTTCGc > 6:329598/1‑149 (MQ=255) aaataCCCCGTTCTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGACGAA‑ACGACCCTGGTCGTCTTCGGCGCCtctac < 7:50866/149‑5 (MQ=38) ataCCCCGTTCTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCAttt < 6:243639/149‑1 (MQ=255) ataCCCCGTTCTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTCGCATTGAAATTCAACATTTAATCGCCGCAGGCCAGAGTATTCAAGAGGGAGTCAGTAGAGGCGCCGAAGAAGACAAGGCACGT‑TTCGTCGCCTTCaat > 4:177550/1‑146 (MQ=255) taCCCCGTTCTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGTGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTa < 1:106377/149‑1 (MQ=255) taCCCCGTTCTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTa > 4:352467/1‑149 (MQ=255) aCCCCGTTCTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTAt < 1:407119/149‑1 (MQ=255) ccccTTTCTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTAt < 4:7527/148‑1 (MQ=255) ccccGTTCTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑Ttcgtc < 5:179784/136‑1 (MQ=255) ccccGTTCTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑Ttcgtc > 6:179784/1‑136 (MQ=255) ccccGTTCTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTAt < 7:304710/148‑1 (MQ=255) cccGTTCTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGa < 2:103649/149‑1 (MQ=255) cccGTTCTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGACGAA‑ACGACCCTGGTCGTCTTCGGCGCCtctactga < 2:90619/146‑8 (MQ=37) cccGTTCTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGACGAA‑ACGACCCTGGTCGTCTTCGGCGCCtctactga > 1:90619/1‑139 (MQ=37) ttCTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAgtgt < 6:356135/149‑1 (MQ=255) aTAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTAtt > 6:84854/1‑149 (MQ=255) aTAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCAGTTATGAGTGAGTAtt > 7:178936/1‑149 (MQ=255) gATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTaaa > 8:154452/1‑149 (MQ=255) taACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCa < 2:322075/148‑1 (MQ=255) taACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAg < 4:286531/149‑1 (MQ=255) ccGCAGCGCTAACGTTAATGCTGGCATTGAAATTCCACATTTAAGCGCAGCAGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCAGAAGACGACCAGGGACGT‑ATCGTCGCCTTCATTTATGAGTGAGTATTTGTAAATCAGTGAt > 8:290936/1‑149 (MQ=255) cTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCTCTGGCGTGAGTATTCAAGAGGGCGTAAGTAGAGGCGCCGAAGACGTCCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATTGGCTGAt < 7:290936/149‑1 (MQ=255) cTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGAt > 1:92457/1‑149 (MQ=255) tAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATggagaatcg > 5:66407/1‑142 (MQ=255) cagatctcATTGAAATTCCACATTTCAGCGGCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTgc < 7:94806/141‑1 (MQ=255) gCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTgcgc > 4:95352/1‑148 (MQ=255) gCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGACGAA‑ACGACCCTGGTCGtcttc > 7:61122/1‑86 (MQ=37) gCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGACGAA‑ACGACCCTGGTCGtcttc < 8:61122/90‑5 (MQ=37) cTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTa > 4:392089/1‑149 (MQ=255) tGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTgcg > 1:80778/1‑145 (MQ=255) tGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTgcg < 2:80778/145‑1 (MQ=255) gCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTAtt < 5:84854/148‑1 (MQ=255) aTTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGAtgtttttat > 8:94806/1‑138 (MQ=255) aTTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATAGGCTGATTTTTTTGCGCTAttgtt > 3:302463/1‑149 (MQ=255) gAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTc > 4:215395/1‑149 (MQ=255) aTTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGtt < 7:20387/149‑1 (MQ=255) tCCACATTTCAGCGCCGCTGGCCAGAGTATTCAAGAGGGCGTCAGTACAGGCGACGAAGAACACCAGGGTCGT‑TTCGTAGCCATAATTTATGATTGTGTATTTGTAAATCAGTGATTGGCAGAATTTATTGCCCTATTATTGACGTTg > 2:204736/1‑148 (MQ=255) cAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTg < 3:95352/148‑1 (MQ=255) aGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTc > 5:232640/1‑134 (MQ=255) aGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTc < 6:232640/134‑1 (MQ=255) gcTGGCGTGAGTATTCAAGAGGCCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTAc < 4:274336/149‑1 (MQ=255) gCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATg > 1:162452/1‑149 (MQ=255) gTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTCCATTTATGAGTGTGTATTTGTAAATAAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGcc > 5:327563/1‑149 (MQ=255) gTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCAGAAGACGACCAGGGTCGT‑TTCGTCGCCTCCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGAGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGcc > 5:321953/1‑149 (MQ=255) aGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTAATTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCtt > 7:128734/1‑149 (MQ=255) aTTCAAGAGTGCGTGAGTATAGGCGTCAAATTCGAGCAGGGTCGT‑TTGGTCGCCTTCATTTATGAGTGTGTATTTTTAAATCAGTGATTGGGTGATTTTTTTTGGGTATTGTT‑TCGTTGATAATATTGATGTCTACGATGCCCTTGCt < 5:329598/148‑1 (MQ=255) aTTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGc < 7:154452/148‑1 (MQ=255) ttCAAGAGTGCGTCAGTTGAGGCGGCGAAGAGGACCTGGGTCGT‑TTCGTCGTCTTCATTTATGAGTGTGTATTTGTTAATCAGTTATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCt < 3:177550/148‑1 (MQ=255) aaGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTtata < 1:189350/149‑1 (MQ=255) aaGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTtata < 2:92457/149‑1 (MQ=255) aaGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTtat > 5:377844/1‑148 (MQ=255) aaGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGGGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTtata < 2:137650/149‑1 (MQ=255) ggCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTAATTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTTATAAAGc < 8:128734/148‑1 (MQ=255) gTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTTATAAAGCtttt > 4:58065/1‑149 (MQ=255) tCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTTATAAAGCTTTTg > 6:297807/1‑149 (MQ=255) gTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGc < 5:14201/132‑1 (MQ=255) gTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGc > 6:14201/1‑132 (MQ=255) gTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGc > 1:257932/1‑132 (MQ=255) gTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGc < 2:257932/132‑1 (MQ=255) gagGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTTATAAAGCTTTTGGCATcc < 7:136548/149‑1 (MQ=255) ggCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTTATAAAGCTTTTGGCATCCtt < 1:204736/149‑1 (MQ=255) ggCGACGAA‑ACGACCCTGGTCGTCTTCGGCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTTATAAAGCTTTTGGCATCCtt < 1:136290/149‑1 (MQ=255) ggCGACGAA‑ACGACCCTGGTCGTCTTCGGCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTTATAAAGCTTTTGGCATCCtt > 4:217431/1‑149 (MQ=255) gcgcCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTTATAAAGCTTTTg < 8:14110/140‑1 (MQ=255) gcgcCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTTATAAAGCTTTTg > 7:14110/1‑140 (MQ=255) cGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGGTTATAAAGCTTTTGGCTTCCTTGAGtt > 7:96343/1‑149 (MQ=255) gAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTTATAAAGGTTTTGGCATCCTTGAGTTc > 6:88520/1‑149 (MQ=255) gacgacCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTTATAAAGCTTTTGGCATCCTTGAGTTCGGt < 3:215395/149‑1 (MQ=255) gacCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTTATAAAGCTTTTGGCATCCTTGAGTTCGGttt > 5:178977/1‑148 (MQ=255) gacCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTTATAAAGCTTTTGGCATCCTTGAGTTCGGttt > 1:106468/1‑148 (MQ=255) gT‑TTCTTCGCCTTCATTTTTTAGTGTTTATTTGTAAATCAGTGATTGGCTTATTTTTTTGCGGTATTGTTGTCTTTGATAATCTTGATGTCTACGATGCCCTTGCTTATAAAGCTTTTGGCATCCTTGAGTTCGGTTTTAAGGTGttt < 7:189986/148‑1 (MQ=255) gT‑TTCGGCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTTATAAAGCTTTTGGCATCCTTGAGTTCGGTTTTAAGGTGTTTg < 3:352467/149‑1 (MQ=255) t‑ttCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTTATAAAGCTTTTGGCATCCTTGAGTTCGGTTTTAAGGTGTTTgg > 4:242582/1‑149 (MQ=255) t‑ttCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTTATAAAGCTTTTGGCATCCTTGAGTTCGGTTTTAAGGTGTTTg > 1:123071/1‑148 (MQ=255) | TCGTCGACAATAAATACCCCGTTCTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTTATAAAGCTTTTGGCATCCTTGAGTTCGGTTTTAAGGTGTTTGG > NC_002947/2344543‑2344836 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |