New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 14939754 (0.830)3 (0.050) 3/250 NT 5.5% coding (423/792 nt) PP_0141 ABC transporter ATP‑binding protein
?NC_002947 = 149444 52 (0.840)coding (376/792 nt) PP_0141 ABC transporter ATP‑binding protein

CATCGCGCAGGGTAAGGATCAACTGGTCAAATGCCGCGGCACCGATCGGGTCCAGGCCAGCCGTGGGTTCGTCGAGGAACAGGATGTCCGGGTCCAGGGCCAAGGCGCGGGCCAGCGCTGCGCGCTTGATCATGCCCCCCGACAACGAGGCCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/149243‑149397
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccgggGTGAAACTGGCCCTTGCCGGGTTGCCGATCTCGGCTGCCGACAAGTACCCGGCCTCGTTGTCGGGGGGCATGATCAAGCGCGCAGCGCTGGCCCGCGCCTTGGCCCTGGACCCGGACATCCTGTTCCTCGACGAACCCACGGCTGGCC  <  NC_002947/149444‑149297
                                                                                                                                                                                                                                                                                                               
CATCGCGCAGGGTAAGGATCAACTGGTCAAATGCCGCGGCACCGATCGGGTCCAGGCCAGCCGTGGGTTCGTCGAGGAACAGGATGTCCGGGTCCAGGGCCAAGGCGCGGGCCAGCGCTGCGCGCTTGATCATGCCCCCCGACAACGAG                                                                                                                                                            >  3:278442/1‑149
    GCGCAGGGTAAGGATCAACTGGTCAAATGCCGCGGCACCGATCGGGTCCAGGCCAGCCGTGGGTTCGTCGAGGAACAGGATGTCCGGGTCCAGGGCCAAGGCGCGGGCCAGCGCTGCGCGCTTGATCATGCCCCCCGACAACGAGGCCG                                                                                                                                                        <  8:372390/149‑1
      GCAGGGTAAGGATCAACTGGTCAAATGCCGCGGCACCGATCGGGTCCAGGCCAGCCGTGGGTTCGTCGAGGAACAGGATGTCCGGGTCCAGGGCCAAGGCGCGGGCCAGCGCTGCGCGCTTGATCATGCCCCCCGACAACGAGGCCGGG                                                                                                                                                      <  3:151922/149‑1
                                                                   TTCGTCGAGGAACAGGATGTCCGGGTCCAGGGCCAAGGCGCGGGCCAGCGCTGCGCGCTTGATCATGCCCCCCGACAACGAGGCCGGGGTGAAACTGGCCCTTGCCGGGTTGCCGATCTCGGCTGCCGACAAGTACCCGGCCTCGTTGT                                                                                         <  4:340850/149‑1
                                                                                                                        CGCGCTTGATCATGCCCCCCGACAACGAGGCCGGGGTGAAACTGGCCCTTGCCGGGTTGCCGATCTCGGCTGCCGACAAGTACCCGGCCTC                                                                                              >  1:211260/1‑91
                                                                                                                        CGCGCTTGATCATGCCCCCCGACAACGAGGCCGGGGTGAAACTGGCCCTTGCCGGGTTGCCGATCTCGGCTGCCGACAAGTACCCGGCCTC                                                                                              <  2:211260/91‑1
                                                                                                                                                     GCCGGGGTGAAACTGGCCCTTGCCGGGTTGCCGATCTCGGCTGCCGACAAGTACCCGGCCTCGTTGTCGGGGGGCATGATCAAGCGCGCAGCGCTGGCCCGCGCCTTGGCCCTGGACCCGGACATCCTGTTCCTCGACGAACCCACG         <  1:394362/147‑1
                                                                                                                                                     GCCGGGGTGAAACTGGCCCTTGCCGGGTTGCCGATCTCGGCTGCCGACAAGTACCCGGCCTCGTTGTCGGGGGGCATGATCAAGCGCGCAGCGCTGGCCCGCGCCTTGGCCCTGGACCCGGACATCCTGTTCCTCGACGAACCCACG         <  4:282719/147‑1
                                                                                                                                                          GGTGAAACTGGCCCTTGCCGGGTTGCCGATCTCGGCTGCCGACAAGTACCCGGCCTCGTTGTCGGGGGGCATGATCAAGCGCGCAGCGCTGGCCCGCGCCTTGGCCCTGGACCCGGACATCCTGTTCCTCGACGAACCCACGGCTGGCC  >  4:383587/1‑149
                                                                                                                                                                                                                                                                                                               
CATCGCGCAGGGTAAGGATCAACTGGTCAAATGCCGCGGCACCGATCGGGTCCAGGCCAGCCGTGGGTTCGTCGAGGAACAGGATGTCCGGGTCCAGGGCCAAGGCGCGGGCCAGCGCTGCGCGCTTGATCATGCCCCCCGACAACGAGGCCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/149243‑149397
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccgggGTGAAACTGGCCCTTGCCGGGTTGCCGATCTCGGCTGCCGACAAGTACCCGGCCTCGTTGTCGGGGGGCATGATCAAGCGCGCAGCGCTGGCCCGCGCCTTGGCCCTGGACCCGGACATCCTGTTCCTCGACGAACCCACGGCTGGCC  <  NC_002947/149444‑149297

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.