New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 276259 | 56 (0.860) | 3 (0.050) | 3/246 | NT | 5.2% | coding (909/1221 nt) | PP_0223 | DszC family monooxygenase |
? | NC_002947 | = 276281 | 57 (0.940) | coding (887/1221 nt) | PP_0223 | DszC family monooxygenase |
TTCGAACAGGGTGGTACCGGCGGTGAGGGAAATTTCGGTGCTGATGGCGCGTGCTTCGGCCACGGCGATGGAGGCGGCGGCCACGTTGTCGGCAGTGCTGTCGTCGCGGGCGCGGTCGAGGTATTCGCCTGCGCGCTCCAGCAGGGCTTCGG‑CC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/276106‑276259 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcttcgg‑ccATCTGGCGGTCCGCTTGCACGCGGCCGAAGCCCTGCTGGAGCGCGCAGGCGAATACCTCGACCGCGCCCGCGACGACAGCACTGCCGACAACGTGGCCGCCGCCTCCATCGCCGTGGCCGAAGCACGCGCCATCAGCACCGAAATTT < NC_002947/276281‑276135 TTCGAACAGGGTGGTACCGGCGGTGAGGGAAATTTCGGTGCTGATGGCGCGTGCTTCGGCCACGGCGATGGAGG‑GGCGGCCAAGTTGTCGGCAGTTCTGTACTAGCGGGCGCGGTAGAGGTATTAGCCTTCGCGCTGCAGGAGGGCT > 5:182136/1‑147 CGAACAGGGTGGTACCGGCGGTGAGGGAAATTTCGGTGCTGATGGCGCGTGCTTCGGCCACGGCGATGGAGGCGGCGGCCACGTTGTCGGCAGTGCTGTCGTCGCGGGCGCGGTCGAGGTATTCGCCTGCGCGCTCCAGCAGGGCTTCG > 3:174821/1‑149 AACAGGGTGGTACCGGCGGTGAGGGAAATTTCGGTGCTGATGGCGCGTGCTTCGGCCACGGCGATGGAGGCGGCGGCCACGTTGTCGGCAGTGCTGTCGTCGCGGGCGCGGTCGAGGTATTCGCCTGCGCGCTCCAGCAGGGCTTCGG‑C < 5:258756/149‑1 AACAGGGTGGTACCGGCGGTGAGGGAAATTTCGGTGCTGATGGCGCGTGCTTCGGCCACGGCGATGGAGGCGGCGGCCACGTTGTCGGCAGTGCTGTCGTCGCGGGCGCGGTCGAGGTATTCGCCTGCGCGCTCCAGCAGGG > 3:398279/1‑142 AACAGGGTGGTACCGGCGGGGAGGGAAATTTCGGTGCTGATGGCGCGTGCTTCGGCCACGGCGATGGAGGCGGCGGCCACGTTGTCGGCAGTGCTGTCGTCGCGGGCGCGGTCGAGGTATTCGCCTGCGCGCTCCAGCAGGG < 4:398279/142‑1 ACAGGGTGGTACCGGCGGTGAGGGAAATTTCGGTGCTGATGGCGCGTGCTTCGGCCACGGCGATGGAGGCGGCGGCCACGTTGTCGGCAGTGCTGTCGTCGCGGGCGCGGTCGAGGTATTCGCCTGCGCGCTCCAGCAGGGCTTCGG‑CC > 3:233525/1‑149 GTGCTGATGGCGCGTGCTTCGGCCACGGCGATGGAGGCGGCGGCCACGTTGTCGGCAGTGCTGTCGTCGCGGGCGCGGTCGAGGTATTCGCCTGCGCGCTCCAGCAGGGCTTCGGACCATCTGGCGGTCCGCTTGCACGCGGCCGAAGC < 1:54957/149‑1 GATGGCGCGTGCTTCGGCCACGGCGATGGAGGCGGCGGCCACGTTGTCGGCAGTGCTGTCGTCGCGGGCGCGGTCGAGGTATTCGCCTGCGCGCTCCAGCAGGGCTTCGG‑CCATCTGGCGGTCCGCTTGCACGCGGCCGAAG > 1:262343/1‑142 GATGGCGCGTGCTTCGGCCACGGCGATGGAGGCGGCGGCCACGTTGTCGGCAGTGCTGTCGTCGCGGGCGCGGTCGAGGTATTCGCCTGCGCGCTCCAGCAGGGCTTCGG‑CCATCTGGCGGTCCGCTTGCACGCGGCCGAAG < 2:262343/142‑1 CTTCGG‑CCATCTGGCGGTCCGCTTGCACGCGGCCGAAGCCCTGCTGGAGCGCGCAGGCGAATACCTCGACCGCGCCCGCGACGACCGCACTGCCGACAACGTGGCCGCCGCCTCCATCGCCGTGGCCGAAGCACGCGCCATCAGCACC > 4:337437/1‑148 CTTCGG‑CCATCTGGCGGTCCGCTTGCACGCGGCCGAAGCCCTGCTGGAGCGCGCAGGCGAATACCTCGACCGCGCCCGCGACGACAGCACTGCCGACAACGTGGCCGCCGCCTCCATCGCCGTGGCCGAAGCACGCGCCAT > 7:49936/1‑141 CTTCGG‑CCATCTGGCGGTCCGCTTGCACGCGGCCGAAGCCCTGCTGGAGCGCGCAGGCGAATACCTCGACCGCGCCCGCGACGACAGCACTGCCGACAACGTGGCCGCCGCCTCCATCGCCGTGGCCGAAGCACGCGCCAT < 8:49936/141‑1 CCATCTGGCGGTCCGCTTGCACGCGGCCGAAGCCCTGCTGGAGCGCGCAGGCGAATACCTCGACCGCGCCCGCGACGACAGCACTGCCGACAACGTGGCCGCCGCCTCCATCGCCGTGGCCGAAGCACGCGCCATCAGCACCGAAATTT > 4:174821/1‑149 TTCGAACAGGGTGGTACCGGCGGTGAGGGAAATTTCGGTGCTGATGGCGCGTGCTTCGGCCACGGCGATGGAGGCGGCGGCCACGTTGTCGGCAGTGCTGTCGTCGCGGGCGCGGTCGAGGTATTCGCCTGCGCGCTCCAGCAGGGCTTCGG‑CC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/276106‑276259 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcttcgg‑ccATCTGGCGGTCCGCTTGCACGCGGCCGAAGCCCTGCTGGAGCGCGCAGGCGAATACCTCGACCGCGCCCGCGACGACAGCACTGCCGACAACGTGGCCGCCGCCTCCATCGCCGTGGCCGAAGCACGCGCCATCAGCACCGAAATTT < NC_002947/276281‑276135 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |