New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 27625956 (0.860)3 (0.050) 3/246 NT 5.2% coding (909/1221 nt) PP_0223 DszC family monooxygenase
?NC_002947 = 276281 57 (0.940)coding (887/1221 nt) PP_0223 DszC family monooxygenase

TTCGAACAGGGTGGTACCGGCGGTGAGGGAAATTTCGGTGCTGATGGCGCGTGCTTCGGCCACGGCGATGGAGGCGGCGGCCACGTTGTCGGCAGTGCTGTCGTCGCGGGCGCGGTCGAGGTATTCGCCTGCGCGCTCCAGCAGGGCTTCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/276106‑276259
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcttcgg‑ccATCTGGCGGTCCGCTTGCACGCGGCCGAAGCCCTGCTGGAGCGCGCAGGCGAATACCTCGACCGCGCCCGCGACGACAGCACTGCCGACAACGTGGCCGCCGCCTCCATCGCCGTGGCCGAAGCACGCGCCATCAGCACCGAAATTT  <  NC_002947/276281‑276135
                                                                                                                                                                                                                                                                                                              
TTCGAACAGGGTGGTACCGGCGGTGAGGGAAATTTCGGTGCTGATGGCGCGTGCTTCGGCCACGGCGATGGAGGGGCGGCCAAGTTGTCGGCAGTTCTGTACTAGCGGGCGCGGTAGAGGTATTAGCCTTCGCGCTGCAGGAGGGCT                                                                                                                                                            >  5:182136/1‑147
  CGAACAGGGTGGTACCGGCGGTGAGGGAAATTTCGGTGCTGATGGCGCGTGCTTCGGCCACGGCGATGGAGGCGGCGGCCACGTTGTCGGCAGTGCTGTCGTCGCGGGCGCGGTCGAGGTATTCGCCTGCGCGCTCCAGCAGGGCTTCG                                                                                                                                                         >  3:174821/1‑149
    AACAGGGTGGTACCGGCGGTGAGGGAAATTTCGGTGCTGATGGCGCGTGCTTCGGCCACGGCGATGGAGGCGGCGGCCACGTTGTCGGCAGTGCTGTCGTCGCGGGCGCGGTCGAGGTATTCGCCTGCGCGCTCCAGCAGGGCTTCGGC                                                                                                                                                      <  5:258756/149‑1
    AACAGGGTGGTACCGGCGGTGAGGGAAATTTCGGTGCTGATGGCGCGTGCTTCGGCCACGGCGATGGAGGCGGCGGCCACGTTGTCGGCAGTGCTGTCGTCGCGGGCGCGGTCGAGGTATTCGCCTGCGCGCTCCAGCAGGG                                                                                                                                                              >  3:398279/1‑142
    AACAGGGTGGTACCGGCGGGGAGGGAAATTTCGGTGCTGATGGCGCGTGCTTCGGCCACGGCGATGGAGGCGGCGGCCACGTTGTCGGCAGTGCTGTCGTCGCGGGCGCGGTCGAGGTATTCGCCTGCGCGCTCCAGCAGGG                                                                                                                                                              <  4:398279/142‑1
     ACAGGGTGGTACCGGCGGTGAGGGAAATTTCGGTGCTGATGGCGCGTGCTTCGGCCACGGCGATGGAGGCGGCGGCCACGTTGTCGGCAGTGCTGTCGTCGCGGGCGCGGTCGAGGTATTCGCCTGCGCGCTCCAGCAGGGCTTCGGCC                                                                                                                                                     >  3:233525/1‑149
                                     GTGCTGATGGCGCGTGCTTCGGCCACGGCGATGGAGGCGGCGGCCACGTTGTCGGCAGTGCTGTCGTCGCGGGCGCGGTCGAGGTATTCGCCTGCGCGCTCCAGCAGGGCTTCGGACCATCTGGCGGTCCGCTTGCACGCGGCCGAAGC                                                                                                                      <  1:54957/149‑1
                                          GATGGCGCGTGCTTCGGCCACGGCGATGGAGGCGGCGGCCACGTTGTCGGCAGTGCTGTCGTCGCGGGCGCGGTCGAGGTATTCGCCTGCGCGCTCCAGCAGGGCTTCGGCCATCTGGCGGTCCGCTTGCACGCGGCCGAAG                                                                                                                       >  1:262343/1‑142
                                          GATGGCGCGTGCTTCGGCCACGGCGATGGAGGCGGCGGCCACGTTGTCGGCAGTGCTGTCGTCGCGGGCGCGGTCGAGGTATTCGCCTGCGCGCTCCAGCAGGGCTTCGGCCATCTGGCGGTCCGCTTGCACGCGGCCGAAG                                                                                                                       <  2:262343/142‑1
                                                                                                                                                  CTTCGGCCATCTGGCGGTCCGCTTGCACGCGGCCGAAGCCCTGCTGGAGCGCGCAGGCGAATACCTCGACCGCGCCCGCGACGACCGCACTGCCGACAACGTGGCCGCCGCCTCCATCGCCGTGGCCGAAGCACGCGCCATCAGCACC         >  4:337437/1‑148
                                                                                                                                                  CTTCGGCCATCTGGCGGTCCGCTTGCACGCGGCCGAAGCCCTGCTGGAGCGCGCAGGCGAATACCTCGACCGCGCCCGCGACGACAGCACTGCCGACAACGTGGCCGCCGCCTCCATCGCCGTGGCCGAAGCACGCGCCAT                >  7:49936/1‑141
                                                                                                                                                  CTTCGGCCATCTGGCGGTCCGCTTGCACGCGGCCGAAGCCCTGCTGGAGCGCGCAGGCGAATACCTCGACCGCGCCCGCGACGACAGCACTGCCGACAACGTGGCCGCCGCCTCCATCGCCGTGGCCGAAGCACGCGCCAT                <  8:49936/141‑1
                                                                                                                                                         CCATCTGGCGGTCCGCTTGCACGCGGCCGAAGCCCTGCTGGAGCGCGCAGGCGAATACCTCGACCGCGCCCGCGACGACAGCACTGCCGACAACGTGGCCGCCGCCTCCATCGCCGTGGCCGAAGCACGCGCCATCAGCACCGAAATTT  >  4:174821/1‑149
                                                                                                                                                                                                                                                                                                              
TTCGAACAGGGTGGTACCGGCGGTGAGGGAAATTTCGGTGCTGATGGCGCGTGCTTCGGCCACGGCGATGGAGGCGGCGGCCACGTTGTCGGCAGTGCTGTCGTCGCGGGCGCGGTCGAGGTATTCGCCTGCGCGCTCCAGCAGGGCTTCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/276106‑276259
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcttcgg‑ccATCTGGCGGTCCGCTTGCACGCGGCCGAAGCCCTGCTGGAGCGCGCAGGCGAATACCTCGACCGCGCCCGCGACGACAGCACTGCCGACAACGTGGCCGCCGCCTCCATCGCCGTGGCCGAAGCACGCGCCATCAGCACCGAAATTT  <  NC_002947/276281‑276135

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.