New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 325042 = | 73 (1.120) | 4 (0.060) | 4/250 | NT | 5.2% | coding (328/1320 nt) | oprQ | outer‑membrane porin D |
? | NC_002947 | 325096 = | 77 (1.250) | coding (382/1320 nt) | oprQ | outer‑membrane porin D |
GCAGCAGACGTGCATCGTCGTACTGCAGCACTGGCAGTGCTGGCATCTGGTCACCGTACTTCAGCACGGTGTTGGAAATGCGGAACTTCACAGCAGCACCACCACGCGCCAGGTTGTGCGGCGAGCTGGCGTTGCCTTCGGCATTGGTGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/325192‑325042 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggtggtGCTGCTGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCAAAGAGATCCAGGGC > NC_002947/325096‑325239 GCAGCAGACGTGCATCGTCGTACTGCAGCACTGGCAGTGCTGGCATCTGGTCACCGTACTTCAGCACGGTGTTGGAAATGCGGAACTTCACAGCAGCACCACCACGCGCCAGGTTGTGCGGCGAGCTGGCGTTGCCTTCGGCATTG < 4:47027/146‑1 CAGCACCACCACGCGCCAGGTTGTGCGGCGAGCTGGCGTTGCCTTCGGCATTGGTGGTGCTGCTGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGC < 1:282002/131‑1 CAGCACCACCACGCGCCAGGTTGTGCGGCGAGCTGGCGTTGCCTTCGGCATTGGTGGTGCTGCTGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGC > 2:282002/1‑131 AGCACCACCACGCGCCAGGTTGTGCGGCGAGCTGGCGTTGCCTTCGGCATTGGTGGTGCTGCTGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCT > 1:214087/1‑149 CGTTGCCTTCGGCATTGGTGGTGCTGCTGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCT < 2:214087/149‑1 GTGGTGCTGCTGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCAAAGAGATCCAGGGC < 3:47027/149‑1 GCAGCAGACGTGCATCGTCGTACTGCAGCACTGGCAGTGCTGGCATCTGGTCACCGTACTTCAGCACGGTGTTGGAAATGCGGAACTTCACAGCAGCACCACCACGCGCCAGGTTGTGCGGCGAGCTGGCGTTGCCTTCGGCATTGGTGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/325192‑325042 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggtggtGCTGCTGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCAAAGAGATCCAGGGC > NC_002947/325096‑325239 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |