| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 506909 | 58 (0.890) | 5 (0.080) | 5/248 | NT | 8.0% | coding (1403/1482 nt) | trpE | anthranilate synthase component 1 |
| ? | NC_002947 | = 506932 | 60 (0.980) | coding (1426/1482 nt) | trpE | anthranilate synthase component 1 | |||||
GGTCAAGCGTGGGGTTTACGGCGGTGCCGTCGGCTATTTTGCCTGGAACGGCAACATGGATACCGCAATTGCCATTCGTACCGCAGTGATCAAGGACGGCGAGCTGCATGTGCAGGCCGGTGGCGGCATCGTTGCCGACTCGGTGCCGGCGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/506757‑506909‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggcgctTGTTGATGGTTTCTTCCCATTCCAGCGCCGGCACCGAGTCGGCAACGATGCCGCCACCGGCCTGCACATGCAGCTCGCCGTCCTTGATCACTGCGGTACGAATGGCAATTGCGGTATCCATGTTGCCGTTCCAGGCAAAATAGCCGA < NC_002947/506932‑506786 GGTCAAGCGTGGGGTTTACGGCGGTGCCGTCGGCTATTTTGCCTGGAACGGCAACATGGATACCGCAATTGCCATTCGTACCGCAGTGATCAAGGACGGCGAGCTGCATGTGCAGGCCGGTGGCGGCATCGTTGCCGACTCGGTGCCGG > 1:389111/1‑149 TCAAGCGTGGGGTTTACGGCGGTGCCGTCGGCTATTTTGCCTGGAACGGCAACATGGATACCGCAATTGCCATTCGTACCGCAGTGATCAAGGACGGCGAGCTGGATGTGCAGGCCGGTGGCGGCATCGTTGCCGACTCGGTGCCGGCG > 7:270333/1‑149 GTTTACGGCGGTGCCGTCGGCTATTTTGCCTGGAACGGCAACATGGATACCGCAATTGCCATTCGTACCGCAGTGATCAAGGACGGCGAGCTGCATGTGCAGGCCGGTGGCGGCATCGTTGCCGACTCGGTGCCGGCGCTTGTTGATGG > 3:105882/1‑149 TTTTGCCTGGAACGGCAACATGGATACCGCAATTGCCATTCGTACCGCAGTGATCAAGGACGGCGAGCTGCATGTGCAGGCCGGTGGCGGCATCGTTGCCGACTCGGTGCCGGCGCTTGTTGATGGTTTCTTCCCATTCCAGCGCCG < 4:105882/147‑1 CTGGAACGGCAACATGGATACCGCAATTGCCATTCGTACCGCAGTGATCAAGGACGGCGAGCTGCATGTGCAGGCCGGTGGCGGCATCGTTGCCGACTCGGTGCCGGCGCTTGTTGATGGTTTCTTCCCATTCCAGCGCCGG > 3:37863/1‑142 CTGGAACGGCAACATGGATACCGCAATTGCCATTCGTACCGCAGTGATCAAGGACGGCGAGCTGCATGTGCAGGCCGGTGGCGGCATCGTTGCCGACTCGGTGCCGGCGCTTGTTGATGGTTTCTTCCCATTCCAGCGCCGG < 4:37863/142‑1 CAAGGACGGCGAGCTGCATGTGCAGGCCGGTGGCGGCATCGTTGCCGACTCGGTGCCGGCGCTTGTTGATGGTTTCTTCCCATTCCCGCGCCGG > 8:96210/1‑94 CCGGCGCTTGTTGATGGTTTCTTCCCATTCCAGCGCCGGCACCGAGTCGGCAACGATGCCGCCACCGGCCTGCACATGCAGCTCGCCGTCCTTGATCACTGCGGTACGAATGGCAATTGCGGTATCCATGTTGCCGTTCCAGGCAAAA > 5:296744/1‑148 CGGCGCTTGTTGATGGTTTCTTCCCATTCCAGCGCCGGCACCGAGTCGGCAACGATGCCGCCACCGGCCTGCACATGCAGCTCGCCGTCCTTGATCACTGCGGTACGAATGGCAATTGCGGTATCCATGTTGCCGTTCCAGGCAAAATA < 6:122095/149‑1 CGCTTGTTGATGGTTTCTTCCCATTCGAGCGCCGGCTCCGAGTCGGCAACGATGCCGCCACCGGCCTGCACATGCAGCTCGCCGTCCTTGATCACTGCGGTACGAATTGCAATTGCGGTATCCATGTTGCCGTTCCAGGCAAAATAGCC < 8:278478/149‑1 CTTGGTGATGGTTTCTTCCCATTCCAGCGCCGGCACCGAGTCGGCAACGATGCCGCCACCGGCCTGCACATGCAGCTCGCCGTCCTTGATCACTGCGGTACGAATGGCAATTGCGGTATCCATGTTGCCGTTCCAGGCAAAATAGCCGA < 8:275211/149‑1 GGTCAAGCGTGGGGTTTACGGCGGTGCCGTCGGCTATTTTGCCTGGAACGGCAACATGGATACCGCAATTGCCATTCGTACCGCAGTGATCAAGGACGGCGAGCTGCATGTGCAGGCCGGTGGCGGCATCGTTGCCGACTCGGTGCCGGCGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/506757‑506909‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggcgctTGTTGATGGTTTCTTCCCATTCCAGCGCCGGCACCGAGTCGGCAACGATGCCGCCACCGGCCTGCACATGCAGCTCGCCGTCCTTGATCACTGCGGTACGAATGGCAATTGCGGTATCCATGTTGCCGTTCCAGGCAAAATAGCCGA < NC_002947/506932‑506786 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |