New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 548338	82 (1.260)	4 (0.070)	4/248	NT	5.2%	coding (1188/2148 nt)	fusA	elongation factor G 1
	?	NC_002947	= 548382	70 (1.150)					coding (1232/2148 nt)	fusA	elongation factor G 1

GTTCGCGTTTACTCGGGCTTCCTGACCTCCGGTGACTCCGTCATCAACTCGGTCAAAGGCAAGAAAGAGCGCGTTGGTCGTATGGTCCAGATGCACGCCAACCAGCGTGAAGAGATCAAAGAAGTACGTGCAGGCGACATCGCTGCTCTGATCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/548183‑548338 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgatcggcTTGTCGGCGTTGCACAGGGTATCACCAGTAGTGACGTCCTTCATGCCGATCAGAGCAGCGATGTCGCCTGCACGTACTTCTTTGATCTCTTCACGCTGGTTGGCGTGCATCTGGACCATACGACCAACGCGCTCTTTCTTGCCTTTGA  <  NC_002947/548382‑548235                                                                                                                                                                                                                                                                                                                  GTTCGCGTTTACTCGGGCTTCCTGACCTCCGGTGACTCCGTCATCAACTCGGTCAAAGGCAAGAAAGAGCGCGTTGGTCGTATGGTCCAGATGCACGCCAACCAGCGTGAAGAGATCAAAGAAGTACGTGCAGGCGACATCGCTGCTCT                                                                                                                                                             >  2:300124/1‑149     GCGTTTACTCGGGCTTCCTGACCTCCGGTGACTCCGTCATCAACTCGGTCAAAGGCAAGAAAGAGCGCGTTGGTCGTATGGTCCAGATGCACGCCAACCAGCGTGAAGAGATCAAAGAAGTACGTGCAGGCGACATCGCTGCTCTGATC                                                                                                                                                         >  6:115792/1‑149      CGTTTACTCGGGCTTCCTGACCTCCGGTGACTCCGTCATCAACTCGGTCAAAGGCAAGAAAGAGCGCGTTGGTCGTATGGTCCAGATGCACGCCAACCAGCGTGAAGAGATCAAAGAAGTACGTGCAGGCGACATCGCTGCTCTGATCG                                                                                                                                                        >  8:74232/1‑149        TTTACTCGGGCTTCCTGACCTCCGGTGACTCCGTCATCAACTCGGTCAAAGGCAAGAAAGAGCGCGTTGGTCGTATGGTCCAGATGCACGCCAACCAGCGTGAAGAGATCAAAGAAGTACGTGCAGGCGACATCGCTGCTCTGATCGGC                                                                                                                                                      <  1:300124/149‑1                                     TCCGTCATCAACTCGGTCAAAGGCAAGAAAGAGCGCGTTGGTCGTATGGTCCAGATGCACGCCAACCAGCGTGAAGAGATCAAAGAAGTACGTGCAGGCGACATCGCTGCTCTGATCGGC                                                                                                                                                      <  5:275816/120‑1                                     TCCGTCATCAACTCGGTCAAAGGCAAGAAAGAGCGCGTTGGTCGTATGGTCCAGATGCACGCCAACCAGCGTGAAGAGATCAAAGAAGTACGTGCAGGCGACATCGCTGCTCTGATCGGC                                                                                                                                                      >  6:275816/1‑120                                                         AGGCAAGAAAGAGCGCGTTGGTCGTATGGTCCAGATGCACGCCAACCAGCGTGAAGAGATCAAAGAAGTACGTGCAGGCGACATCGCTGCTCTGATCGGCTTGTCGGCGTTGCACAGGGTATCACCAGTAGTGACGTCCTTCATGCCGA                                                                                                     >  2:84674/1‑149                                                             AAGAAAGAGCGCGTTGGTCGTATGGTCCAGATGCACGCCAACCAGCGTGAAGAGATCAAAGAAGTACGTGCAGGCGACATCGCTGCTCTGATCGGCTTGTCGGCGTTGCACAGGGTATCACCAGTAGTGACGTCCTTCATGCCGATCAG                                                                                                 <  1:84674/149‑1                                                               GAAAGAGCGCGTTGGTCGTATGGTCCAGATGCACGCCAACCAGCGTGAAGAGATCAAAGAAGTACGTGCAGGCGACATCGCTGCTCTGATCGGCTTGTCGGCGTTGCACAGGGTATCACCAGTAGTGACGTCCTTCATG                                                                                                         <  7:219240/139‑1                                                               GAAAGAGCGCGTTGGTCGTATGGTCCAGATGCACGCCAACCAGCGTGAAGAGATCAAAGAAGTACGTGCAGGCGACATCGCTGCTCTGATCGGCTTGTCGGCGTTGCACAGGGTATCACCAGTAGTGACGTCCTTCATG                                                                                                         >  8:219240/1‑139                                                                                                                                                     TGATCGGCTTGTCGGCGTTGCACAGGGTATCACCAGTAGTGACGTCCTTCATGCCGATCAGAGCAGCGATGTCGCCTGCACGTACTTCTTTGATCTCTTCACGCTGGTTGGCGTGCATCTGGACCATACGACCAACGCGCTCTTTCTTG         >  4:260089/1‑149                                                                                                                                                      GATCGGCTTGTCGGCGTTGCACAGGGTATCACCAGTAGTGACGTCCTTCATGCCGATCAGAGCAGCGATGTCGCCTGCACGTACTTCTTTGATCTCTTCACGCTGGTTGGCGTGCATCTGGACCATACGACCAACGCGCTCTTTC            >  3:288604/1‑145                                                                                                                                                      GATCGGCTTGTCGGCGTTGCACAGGGTATCACCAGTAGTGACGTCCTTCATGCCGATCAGAGCAGCGATGTCGCCTGCACGTACTTCTTTGATCTCTTCACGCTGGTTGGCGTGCATCTGGACCATACGACCAACGCGCTCTTTC            <  4:288604/145‑1                                                                                                                                                        TCGGCTTGTCGGCGTTGCACAGGGTATCACCAGTAGTGACGTCCTTCATGCCGATCAGAGCAGCGATGTCGCCTGCACGTACTTCTTTGATCTCTTCACGCTGGTTGGCGTGCATCTGGACCATACGACCAACGCGCTCTTTCTTGCCT      >  6:375001/1‑149                                                                                                                                                           GCTTGTCGGCGTTGCACAGGGTATCACCAGTAGTGACGTCCTTCATGCCGATCAGAGCAGCGATGTCGCCTGCACGTACTTCTTTGATCTCTTCACGCTGGTTGGCGTGCATCTGGACCATACGACCAACGCGCTCTTTCTTGCCTTT    >  3:142348/1‑148                                                                                                                                                            CTTGTCGGCGTTGCACAGGGTATCACCAGTAGTGACGTCCTTCATGCCGATCAGAGCAGCGATGTCGCCTGCACGTACTTCTTTGATCTCTTCACGCTGGTTGGCGTGCATCTGGACCATACGACCAACGCGCTCTTTCTTGCCTTTGA  <  4:155170/149‑1                                                                                                                                                                                                                                                                                                                  GTTCGCGTTTACTCGGGCTTCCTGACCTCCGGTGACTCCGTCATCAACTCGGTCAAAGGCAAGAAAGAGCGCGTTGGTCGTATGGTCCAGATGCACGCCAACCAGCGTGAAGAGATCAAAGAAGTACGTGCAGGCGACATCGCTGCTCTGATCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/548183‑548338 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgatcggcTTGTCGGCGTTGCACAGGGTATCACCAGTAGTGACGTCCTTCATGCCGATCAGAGCAGCGATGTCGCCTGCACGTACTTCTTTGATCTCTTCACGCTGGTTGGCGTGCATCTGGACCATACGACCAACGCGCTCTTTCTTGCCTTTGA  <  NC_002947/548382‑548235

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.