| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 783402 = | 54 (0.830) | 3 (0.050) | 3/250 | NT | 5.5% | coding (2524/3831 nt) | PP_0672 | sensory box protein |
| ? | NC_002947 | 783435 = | 52 (0.840) | coding (2491/3831 nt) | PP_0672 | sensory box protein | |||||
TGGCTCAAGCGCCGTGACGGCGACCACTACCCGGCCTGGGTCGGCATCACCGCGGTACTGGACGACGAAGGCGACCTGGCCAGCTACGTGTGCTTCTTCACCGACATCAGCGAACGCAAGGCCAGCGAACAGCGCATCCACCGCCTGGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/783552‑783402‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggcctTGCGTTCGCTGATGTCGGTGAAGAAGCACACGTAGCTGGCCAGGTCGCCTTCGTCGTCCAGTACCGCGGTGATGCCGACCCAGGCCGGGTAGTGGTCGCCGTCACGGCGCTTGAGCCACACCTCACCTTCCCAGCTGCCGCGCTGGT > NC_002947/783435‑783581 TGGCTCAAGCGCCGTGACGGCTACCACTACCCGGCCTGGGTCGGCATCACCGCGGTACTGGACGCCGAAGGCGACCTGGCCAGCTACGTGTGCTTCTTCAGCGACATCAGCGACCGCACGGCCAGCGCACAGCGCCTCCACCGGCTGGC > 4:134417/1‑149TGGCTCAAGCGCCGTGACGGCGACCACTACCCGGCCTGGGTCGGCATCACCGCGGTACTGGACGACGAAGGCGACCTGGCCAGCTACGTGTGCTTCTTCACCGACATCAGCGAACGCAAGGCCAGCGAACAGCGCATCCACCGCCTGGC < 3:39053/149‑1 GCTCAAGCGCCGTGACGGCGACCACTACCCGGCCTGGGTCGGCATCACCGCGGTACTGGACGACGAAGGCGACCTGGCCAGCTACGTGTGCTTCTTCACCGACATCAGCGAACGCAAGGCCAGCGAACAGCGCATCCACCGCCTGGCC < 8:134273/148‑1 CGAACGCAAGGCCAGCGAACAGCGCATCCACCGCCTGGCCTTGCGTTCGCTGATGTCGGTGAAGAAGCACACGTAGCTGGCCAGGTCGCCTTCGTCGTCCAGTACCGCG > 5:355502/1‑109 CGAACGCAAGGCCAGCGAACAGCGCATCCACCGCCTGGCCTTGCGTTCGCTGATGTCGGTGAAGAAGCACACGTAGCTGGCCAGGTCGCCTTCGTCGTCCAGTACCGCG < 6:355502/109‑1 CGCAAGGCCAGCGAACAGCGCATCCACCGCCTGGCCTTGCGTTCGCTGATGTCGGTGAAGAAGCACACGTAGCTGGCCAGGTCGCCTTCGTCGTCCAGTACCGCGGTGATGCCGACCCAGGCCGGGTAGTGGTCGCCGTCACGGCGCTT > 8:15957/1‑149 CCTTGCGTTCGCTGATGTCGGTGAAGAAGCACACGTAGCTGGCCAGGTCGCCTTCGTCGTCCAGTACCGCGGTGATGCCGACCCAGGCCGGGTAGTGGTCGCCGTCACGGCGCTTGAGCCACACCTCACCTTCCCAGCTGCCGCGCTGG < 7:15957/149‑1 CCTTGCGTTCGCTGATGTCGGTGAAGAAGCACACGTAGCTGGCCAGGTCGCCTTCGTCGTCCAGTACCGCGGTGATGCCGACCCAGGCCGGGGAGTGGTCGCTGTCACGGCGCTTGAGCCACACCTCACCTTCCCCGCGGCCGCGCGGG > 8:299665/1‑149 CTTGCGTTCGCTGATGTCGGTGAAGAAGCACACGTAGCTGGCCAGGTCGCCTTCGTCGTCCAGTACCGCGGTGATGCCGACCCAGGCCGGGTAGTGGTCGCCGTCACGGCGCTTGAGCCACACCTCACCTTCCCAGCTGCCGCGCTGGT > 3:238675/1‑149 TGGCTCAAGCGCCGTGACGGCGACCACTACCCGGCCTGGGTCGGCATCACCGCGGTACTGGACGACGAAGGCGACCTGGCCAGCTACGTGTGCTTCTTCACCGACATCAGCGAACGCAAGGCCAGCGAACAGCGCATCCACCGCCTGGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/783552‑783402‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggcctTGCGTTCGCTGATGTCGGTGAAGAAGCACACGTAGCTGGCCAGGTCGCCTTCGTCGTCCAGTACCGCGGTGATGCCGACCCAGGCCGGGTAGTGGTCGCCGTCACGGCGCTTGAGCCACACCTCACCTTCCCAGCTGCCGCGCTGGT > NC_002947/783435‑783581 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |