| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 877021 = | 71 (1.090) | 4 (0.070) | 3/240 | NT | 5.9% | coding (138/999 nt) | rsmC | 16S rRNA methyltransferase |
| ? | NC_002947 | 877102 = | 63 (1.070) | coding (57/999 nt) | rsmC | 16S rRNA methyltransferase | |||||
AGGAGACGTCGTCCATGGACCCGCGCAGTGAAGTGTTGCTCCGTCAGGCAGAGCTGTTTCAGGGGCCGCTGCTGATCGCCGGCGCCCCCGCCGACGACCTGCTCGGCCAGTTGCCTCAGGCCCAGGCCTGGACCTGGCATGCCGGCGATCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/877172‑877021‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccggcgatcagCAGCGGCCCCTGAAACAGCTCTGCCTGACGGAGCAACACTTCACTGCGCGGGTCCATGGACGACGTCTCCTGGAAAAAAGTGGCGCAGTGTAACAGAGGCGGGCGCCTGGCTCAGCTGACCACGCGGCGTGGCTGCCCGGCGAAGAAG > NC_002947/877102‑877249 AGGAGACGTCGTCCATGGACCCGCGCAGTGAAGTGTTGCTCCGTCAGGCAGAGCTGTTTCAGGGGCCGCTGCTGATCGCCGGCGCCCCCGCCGACGACCTGCTCGGCCAGTTGCCTCAGGCCCAGGCCTGGACCTGGCATGCCGGCGAT > 1:380279/1‑149 GAGACGTCGTCCATGGACCCGCGCAGTGAAGTGTTGCTCCGTCAGGCAGAGCTGTTTCAGGGGCCGCTGCTGATCGCCGGCGCCCCCGCCGACGACCTGCTCGGCCAGTTGCCTCAGGCCCAGGCCTGGACCTGGCATGCCGGCGATCA < 2:296551/149‑1 TGATCGCCGGCGCCCCCGCCGACGACCTGCTCGGCCAGTTGCCTCAGGCCCAGGCCTGGACCTGGCATGCCGGCGATCAGCAGCGGCCCCTGAAACAGCTCTGCCTGACGGAGCAACACTTCACTGCGCGGGTCCATGGACGACGTCTC > 1:202644/1‑149 ATCGCCGGCGCCCCCGCCGACGACCTGCTCGGCCAGTTGCCTCAGGCCCAGGCCTGGACCTGGCATGCCGGCGATCAGCAGCGGCCCCTGAAACAGCTCTGCCTGACGGAGCAACACTTCACTGCGCGGGTCCATGGACGACGTCTCCT > 8:227806/1‑149 GACGACCTGCTCGGCCAGTTGCCTCAGGCCCAGGCCTGGACCTGGCATGCCGGCGATCAGCAGCGGCCCCTGAAACAGCTCTGCCTGACGGAGCAACACTTCACTGCGCGGGTCCATGGACGACGTCTCCTGGAAAAAAGTGGCGCAGT < 2:202644/149‑1 GACGACCTGCTCGGCCAGTTGCCTCAGGCCCAGGCCTGGACCTGGCATGCCGGCGATCAGCAGCGGCCCCTGAAACAGCTCTGCCTGACGGAGCAACACTTCACTGCGCGGGTCCATGGACGACGTCTCCTGGAAAAAAGTGGCGCAGT < 7:227806/149‑1 CGGCGATCAGCAGCGGCCCCTGAAACAGCTCTGCCTGACGGAGCAACACTTCACTGCGCGGGTCCATGGACGACGTCTCCTGGAAAAAAGTGGCGCAGTGTAACAGAGGCGGGCGCCTGGCTCAGCTGACCACGCGGCGTGGCTGCCCG < 1:379390/149‑1 CGGCGATCAGCAGCGGCCCCTGAAACAGCTCTGCCTGACGGAGCAACACTTCACTGCGCGGGTCCATGGACGACGTCTCCTGGAAAAAAGTGGCGCAGTGTAACAGAGGCGGGCGCCTGGCTCAGCTGACCACGCGGCGTGGCTGCCCG > 3:21522/1‑149 CGGCGATCAGCAGCGGCCCCTGAAACAGCTCTGCCTGACGGAGCAACACTTCACTGCGCGGGTCCATGGACGACGTCTCCTGGAAAAAAGTGGCGCAGTGTAACAGAGGCGGGCGCCTGGCTCAGCTGACCACGCGGCGTGGCTGCCCG < 5:305208/149‑1 CGGCGATCAGCAGCGGCCCCTGAAACAGCTCTGCCTGACGGAGCAACACTTCACTGCGCGGGTCCATGGACGACGTCTCCTGGAAAAAAGTGGCGCAGTGTAACAGAGGCGGGCGCCTGGCTCAGCTGACCACGCGGCGTGGCTGCCCG < 8:222438/149‑1 GATCAGCAGCGGCCCCTGAAACAGCTCTGCCTGACGGAGCAACACTTCACTGCGCGGGTCCATGGACGACGTCTCCTGGAAAAAAGTGGCGCAGTGTAACAGAGGCGGGCGCCTGGCTCAGCTGACCACGC < 5:388614/131‑1 GATCAGCAGCGGCCCCTGAAACAGCTCTGCCTGACGGAGCAACACTTCACTGCGCGGGTCCATGGACGACGTCTCCTGGAAAAAAGTGGCGCAGTGTAACAGAGGCGGGCGCCTGGCTCAGCTGACCACGC > 6:388614/1‑131 TCAGCAGCGGCCCCTGAAACAGCTCTGCCTGACGGAGCAACACTTCACTGCGCGGGTCCATGGACGACGTCTCCTGGAAAAAAGTGGCGCAGTGTAACAGAGGCGGGCGCCTGGCTCAGCTGACCACGCGGCGTGGCTGCCCGG > 3:15527/1‑144 TCAGCAGCGGCCCCTGAAACAGCTCTGCCTGACGGAGCAACACTTCACTGCGCGGGTCCATGGACGACGTCTCCTGGAAAAAAGTGGCGCAGTGTAACAGAGGCGGGCGCCTGGCTCAGCTGACCACGCGGCGTGGCTGCCCGG < 4:15527/144‑1 AGCAGCGGCCCCTGAAACAGCTCTGCCTGACGGAGCAACACTTCACTGCGCGGGTCCATGGACGACGTCTCCTGGAAAAAAGTGGCGCAGTGTAACAGAGGCGGGCGCCTGGCTCAGCTGACCACGCGGCGTGGCTGCCCGGCGAAGAA < 1:352638/149‑1 AGCAGCGGCCCCTGAAACAGCTCTGCCTGACGGAGCAACACTTCACTGCGCGGGTCCATGGACGACGTCTCCTGGAAAAAAGTGGCGCAGTGTAACAGAGGCGGGCGCCTGGCTCAGCTGACCACGCGGCGTGGCTGCCCGGCGAAGAA < 8:97418/149‑1 AGCAGCGGCCCCTGAAACAGCTCTGCCTGACGGAGCAACACTTCACTGCGCGGGTCCATGGACGACGTCTCCTGGAAAAAAGTGGCGCAGTGTAACAGAGGCGG < 4:53540/104‑1 AGCAGCGGCCCCTGAAACAGCTCTGCCTGACGGAGCAACACTTCACTGCGCGGGTCCATGGACGACGTCTCCTGGAAAAAAGTGGCGCAGTGTAACAGAGGCGG > 3:53540/1‑104 GCAGCGGCCCCTGAAACAGCTCTGCCTGACGGAGCAACACTTCACTGCGCGGGTCCATGGACGACGTCTCCTGGAAAAAAGTGGCGCAGTGTAACAGAGGCGGGCGCCTGGCTCAGCTGACCACGCGGCGTGGCTGCCCGGCGAAGAAG < 7:360034/149‑1 GCAGCGGCCCCTGAAACAGCTCTGCCTGACGGAGCAACACTTCACTGCGCGGGTCCATGGACGACGTCTCCTGGAAAAAAGTGGCGCAGTGTAACAGAGGCGGGCGCCTGGCTCAGCTGACCACGCGGCGTGGCTGCCCGGCGAAGAAG < 6:11195/149‑1 AGGAGACGTCGTCCATGGACCCGCGCAGTGAAGTGTTGCTCCGTCAGGCAGAGCTGTTTCAGGGGCCGCTGCTGATCGCCGGCGCCCCCGCCGACGACCTGCTCGGCCAGTTGCCTCAGGCCCAGGCCTGGACCTGGCATGCCGGCGATCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/877172‑877021‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccggcgatcagCAGCGGCCCCTGAAACAGCTCTGCCTGACGGAGCAACACTTCACTGCGCGGGTCCATGGACGACGTCTCCTGGAAAAAAGTGGCGCAGTGTAACAGAGGCGGGCGCCTGGCTCAGCTGACCACGCGGCGTGGCTGCCCGGCGAAGAAG > NC_002947/877102‑877249 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |