| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 977784 = | 51 (0.780) | 3 (0.050) | 3/248 | NT | 5.3% | coding (736/786 nt) | cysE | serine acetyltransferase |
| ? | NC_002947 | 977853 = | 60 (0.980) | intergenic (+19/‑161) | cysE/iscR | serine acetyltransferase/DNA‑binding transcriptional regulator IscR | |||||
CTACTGCTTTAGTCGGGATTGCATCAGGGAGGCGGGCGCGATTGTAGCAGACGAGGGGCGTGAGCACACGCCCCGCATGCCACCATGACTTCAGTGCGGCGCGATCAATGCGGCTGAGTGTCGCGCTGGGCCACTTGGGCAGCCTCGCTGAAGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/977938‑977784‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgaagtcATGGTGGCATGCGGGGCGTGTGCTCACGCCCCTCGTCTGCTACAATCGCGCCCGCCTCCCTGATGCAATCCCGACTAAAGCAGTAGGTCTAATAGTTGACTTAAATGCTCGGGAATCGCATACTCGCACACATCCTGAAACTCCC > NC_002947/977853‑977997 CTACTGCTTTAGTCGGGATTGCATCAGGGAGGCGGGCGCGATTGTAGCAGACGAGGGGCGTGAGCACACGCCCCGCATGCCACCATGACTTCAGTGCGGCGCGATCAATGCGGCTGAGTGTCGCGCTGGGCCACTTGGGCAGCCTCGCT > 6:128428/1‑149CTACTGCTTTAGTCGGGATTGCATCAGGGAGGCGGGCGCGATTGTAGCAGACGAGGGGCGTGAGCACACGCCCCGCATGCCACCATGACTTCAGTGCGGCGCGATCAATGCGGCTGAGTGTCGCGCTGGGCCACTTGGGCAGCCTCGCT < 6:278581/149‑1 CTGCTTTAGTCGGGATTGCATCAGGGAGGCGGGCGCGATTGTAGCAGACGAGGGGCGTGAGCACACGCCCCGCATGCCACCATGACTTCAGTGCGGCGCGATCAATGCGGCTGAGTGTCGCGCTGGGCCACTTGGGCAGCCTCGCTGAA < 8:153050/149‑1 CTTTAGTCGGGATTGCATCAGGGAGGCGGGCGCGATTGTAGCAGACGAGGGGCGTGAGCACACGCCCCGCATGCCACCATGACTTCAGTGCGGCGCGATCAATGCGGCTGAGTGTCGCGCTGGGCCACTTGGGCAGCCTCGCTGAAG < 7:27769/147‑1 ACCATGACTTCAGTGCGGCGCGATCAATGCGGCTGAGTGTCGCGCTGGGCCACTTGGGCAGCCTCGCTGAAGTCATGGTGGCATGCGGGGCGTGTGCTCACGCCCCTCGTCTGCTACAATCGCGCCCGCCTCCCTGATGCAATCCCGAC > 2:311717/1‑149 CATGACTTCAGTGCGGCGCGATCAATGCGGCTGAGTGTCGCGCTGGGCCACTTGGGCAGCCTCGCTGAAGTCATGGTGGCATGCGGGGCGTGTGCTCACGCCCCTCGTCTGCTACAATCGCGCCCGCCTCCCTGATGCAATCCCGACT > 5:419513/1‑148 AGTGCGGCGCGATCAATGCGGCTGAGTGTCGCGCTGGGCCACTTGGGCAGCCTCGCTGAAGTCATGGTGGCATGCGGGGCGTGTGCTCACGCCCCTCGTCTGCTACAATCGCGCCCGCCTCCCTGATGCAATCCCGACTAAAGCAGTAG < 6:419513/149‑1 AAGTCATGGTGGCATGCGGGGCGTGTGCTCACGCCCCTCGTCTGCTACAATCGCGCCCGCCTCCCTGATGCAATCCCGACTAAAGCAGTAGGTCTAATAGTTGACTTAAATGCTCGGGAATCGCATACTCGCACACATCCTGAAACTCC > 6:158469/1‑149 AGTCATGGTGGCATGCGGGGCGTGTGCTCACGCCCCTCGTCTGCTACAATCGCGCCCGCCTCCCTGATGCAATCCCGACTAAAGCAGTAGGTCTAATAGTTGACTTAAATGCTCGGGAATCGCATACTCGCACACATCCTGAAACTCCC < 3:181947/149‑1 AGTCATGGTGGCATGCGGGGCGTGTGCTCACGCCCCTCGTCTGCTACAATCGCGCCCGCCTCCCTGATGCAATCCCGACTAAAGCAGTAGGTCTAATAGTTGACTTAAATGCTCGGGAATCGCATACTCGCACACATCCTGAAACTCCC < 5:150980/149‑1 CTACTGCTTTAGTCGGGATTGCATCAGGGAGGCGGGCGCGATTGTAGCAGACGAGGGGCGTGAGCACACGCCCCGCATGCCACCATGACTTCAGTGCGGCGCGATCAATGCGGCTGAGTGTCGCGCTGGGCCACTTGGGCAGCCTCGCTGAAGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/977938‑977784‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgaagtcATGGTGGCATGCGGGGCGTGTGCTCACGCCCCTCGTCTGCTACAATCGCGCCCGCCTCCCTGATGCAATCCCGACTAAAGCAGTAGGTCTAATAGTTGACTTAAATGCTCGGGAATCGCATACTCGCACACATCCTGAAACTCCC > NC_002947/977853‑977997 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |