New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 982038 = | 81 (1.240) | 5 (0.080) | 5/250 | NT | 7.1% | coding (915/1863 nt) | hscA | DnaK‑like molecular chaperone |
? | NC_002947 | 982093 = | 55 (0.890) | coding (970/1863 nt) | hscA | DnaK‑like molecular chaperone |
GGGTGCGCCCGAACAGCGCGCCCACGGCCTCACGCACACGCGGCACGCGGGTCGAACCACCGACCATGACCACGGCGCTGACTTCTTCCAGTTCAACGCCACTGTCGCGCACGGCGCGGCGGCAGGC‑CTTCAGGCTGCGGGCAACCAGTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/982189‑982038 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagtggcGTTGAACTGGAAGAAGTCAGCGCCGTGGTCATGGTCGGTGGTTCGACCCGCGTGCCGCGTGTGCGTGAGGCCGTGGGCGCGCTGTTCGGGCGCACCCCGCTGACCTCGATCGACCCAGACCAGGTGGTGGCGATTGGTGCCGCCA > NC_002947/982093‑982237 GGGTGCGCCCGAACAGCGCGCCCACGGCCTCACGCACACGCGGCACGCGGGTCGAACCACCGACCATGACCACGGCGCTGACTTCTTCCAGTTCAACGCCACTGTCGCGCACGGCGCGGCGGCAGGC‑CTTCAGGCTGCGGGCAACCAGT < 8:166728/149‑1 GAACAGCGCGCCCACGGCCTCACGCACACGCGGCACGCGGGTCGAACCACCGACCATGACCACGGCGCTGACTTCTTCCAGTTCAACGCCACTGTCGCGCACGGCGCGGCGGCAGGC‑CTTCAGGCTGCGGGCAACC < 3:302610/136‑1 GAACAGCGCGCCCACGGCCTCACGCACACGCGGCACGCGGGTCGAACCACCGACCATGACCACGGCGCTGACTTCTTCCAGTTCAACGCCACTGTCGCGCACGGCGCGGCGGCAGGC‑CTTCAGGCTGCGGGCAACC > 4:302610/1‑136 ACGCACACGCGGCACGCGGGTCGAACCACCGACCATGACCACGGCGCTGACTTCTTCCAGTTCAACGCCACTGTCGCGCACGGCGCGGCGGCAGGC‑CTTCAGGCTGCGGGCAACCAGTGG > 3:399987/1‑120 ACGCACACGCGGCACGCGGGTCGAACCACCGACCATGACCACGGCGCTGACTTCTTCCAGTTCAACGCCACTGTCGCGCACGGCGCGGCGGCAGGC‑CTTCAGGCTGCGGGCAACCAGTGG < 4:399987/120‑1 CAGTTCAACGCCACAGTCGCGCACGGCGCGGCGGCAGGC‑CTTCAGGCTGCGGGCAACCAGTGGCGTTGAACTGGAAGAAGTCAGCGCCGTGGTCATGGTCGGTGGTTCGACCCGCGTGCCGCGTGTGCGTGAGGCCGTGGGCGCGCTct > 6:87283/1‑147 TTCAACGCCACTGTCGCGCACGGCGCGGCGGCAGGC‑CTTCAGGCTGCGGGCAACCAGTGGCGTTGAACTGGAAGAAGTCAGCGCCGTGGTCATGGTCGGTGGTTCGACCCGCGTGCCGCGTGTGCGAGAGGCCGTGGGCGCGCTGTTCG > 1:265849/1‑149 TTCAACGCCACTGTCGCGCACGGCGCGGCGGCAGGC‑CTTCAGGCTGCGGGCAACCAGTGGCGTTGAACTGGAAGAAGTCAGCGCCGTGGTCATGGTCGGTGGTTCGACCCGCGTGCCGCGTGTGCGAGAGGCCGTGGGCGCGCTGTTCG < 2:265849/149‑1 AACGCCACTGTCGCGCACGGCGCGGCGGCAGGCTCTTCAGGCTGCGGGCAACCAGTGGCGTTGAACTGGAAGAAGTCAGCGCCGTGGTCATGGTCGGTGGTTCGACCCGCGTGCCGCGTGTGCGTGAGGCCGTGGGCGCGCTGTTCGGG > 1:48976/1‑149 GGCGGCAGGC‑CTTCAGGCTGCGGGCAACCAGTGGCGTTGAACTGGAAGAAGTCAGCGCCGTGGTCATGGTCGGTGGTTCGACCCGCGTGCCGCGTGTGCGTGAGGCCGTGGGCGCGCTGTTCGGGCGCACCCCGCTGACCTCGATCGAC < 2:48976/149‑1 CCAGTGGCGTTGAACTGGAAGAAGTCAGCGCCGTGGTCATGGTCGGTGGTTCGACCCTCGTGCCGCGTGTGCGTGAGGCCGTGGGCGCGCTGTTCGGGCGCACCCCGCTGACCTCGATCGACCCAGACCAGGTGGTGGCGATTGGTGCC < 5:87283/149‑1 TGGCGTTGAACTGGAAGAAGTCAGCGCCGTGGTCATGGTCGGTGGTTCGACCCGCGTGCCGCGTGTGCGTGAGGCCGTGGGCGCGCTGTTCGGGCGCACCCCGCTGACCTCGATCGACCCAGACCAGGTGGTGGCGATTGGTGCCGCCA > 1:305585/1‑149 GGGTGCGCCCGAACAGCGCGCCCACGGCCTCACGCACACGCGGCACGCGGGTCGAACCACCGACCATGACCACGGCGCTGACTTCTTCCAGTTCAACGCCACTGTCGCGCACGGCGCGGCGGCAGGC‑CTTCAGGCTGCGGGCAACCAGTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/982189‑982038 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagtggcGTTGAACTGGAAGAAGTCAGCGCCGTGGTCATGGTCGGTGGTTCGACCCGCGTGCCGCGTGTGCGTGAGGCCGTGGGCGCGCTGTTCGGGCGCACCCCGCTGACCTCGATCGACCCAGACCAGGTGGTGGCGATTGGTGCCGCCA > NC_002947/982093‑982237 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |