| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1055572 = | 78 (1.200) | 4 (0.060) | 4/256 | NT | 5.3% | coding (260/1332 nt) | PP_0913 | hypothetical protein |
| ? | NC_002947 | 1055610 = | 67 (1.060) | coding (222/1332 nt) | PP_0913 | hypothetical protein | |||||
CTGCTGCCACCACCGCTGCGCCAGGGGCTGTCGACGAAGCAGCCGGCAAAGCCGTGGTCAAGCATTACACCGACATGGTCTACGCCGTGTACA‑GCGACTCGCTGAGCACTGCCAAGACGCTGCAGACCGCGGTCGATGCGTTCCTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1055719‑1055572‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcAGTGCTCAGCGAGTCGCTGTACACGGCGTAGACCATGTCGGTGTAATGCTTGACCACGGCTTTGCCGGCTGCTTCGTCGACAGCCCCTGGCGCAGCGGTGGTGGCAGCAGCAGGTGCCTGGGCTTGCGGCGCGGCGGCTTTTTCGTCC > NC_002947/1055610‑1055757 CTGCTGCCACCACCGCTGCGCCAGGGGCTGTCGACGAAGCAGCCGGCAAAGCCGTGGTCAAGCATTACACCGACATGGTCTACGCCTTGTACA‑GCGACTCGCTGAGCACTGCCAAGACGCTGCAGACCGCGGTCGATGCGTTCCTGGC < 2:148614/148‑1CTGCTGCCACCACCGCTGCGCCAGGGGCTGTCGACGAAGCAGCCGGCAAAGCCGTGGTCAAGCATTACACCGACATGGTCTACGCCGTGTACATCCGACTCGCTGAGCACTGCCAAGACGCTGCAGACCGCGGTCGATGCGTTCCTGGC < 1:315453/149‑1CTGCTGCCACCACCGCTGCGCCAGGGGCTGTCGACGAAGCAGCCGGCAAAGCCGTGGTCAAGCATTACACCGACATGGTCTACGCCGTGTACA‑GCGACTCGCTGAGCACTGCCAAGACGCTGCAGACCGCGGTCGATGCGTTCCTGG < 1:200343/147‑1 GGGCTGTCGACGAAGCAGCCGGCAAAGCCGTGGTCAAGCATTACACCGACATGGTCTACGCCGTGTACA‑GCGACTCGCTGAGCACTGCCAAGACGCTGCAGACCGCGGTCGATGCGTTCCT > 6:403051/1‑121 GGGCTGTCGACGAAGCAGCCGGCAAAGCCGTGGTCAAGCATTACACCGACATGGTCTACGCCGTGTACA‑GCGACTCGCTGAGCACTGCCAAGACGCTGCAGACCGCGGTCGATGCGTTCCT < 5:403051/121‑1 GCTGAGCACTGCCAAGACGCTGCAGACCGCGGTCGATGCGTTCCTGGCAGTGCTCAGCGAGTCGCTGTACACGGCGTAGACCATGTCGGTGTAATGCTTGACCACGGCTTTGCCGGCTGCTTCGTCGACAGCCCCTGGCGCAGCGGTGG > 2:306948/1‑149 AGACGCTGCAGACCGCGGTCGATGCGTTCCTGGCAGTGCTCAGCGAGTCGCTGTACACGGCGTAGACCATGTCGGTGTAATGCTTGACCACGGCTTTGCCGGCTGCTTCGTCGACAGCCCCTGGCGCAGCGGTGGTGGCAGCAGCAGGT < 1:306948/149‑1 GACGCTGCAGACCGCGGTCGATGCGTTCCTGGCAGTGCTCAGCGAGTCGCTGTACACGGCGTAGA < 4:78746/65‑1 GACGCTGCAGACCGCGGTCGATGCGTTCCTGGCAGTGCTCAGCGAGTCGCTGTACACGGCGTAGA > 3:78746/1‑65 TGGCAGTGCTCAGCGAGTCGCTGTACACGGCGTAGACCATGTCGGTGTAATGCTTGACGACGGCTTTGCCGGCTGCTTCGTCGACAGCCCCTGGCGCAGCGGTGGTGGCAGCAGCAGGTGCCTGGGCTTGCGGCGCGGCGGCTTTTTC < 8:234218/148‑1 GGCAGTGCTCAGCGAGTCGCTGTACACGGCGTAGACCATGTCGGTGTAATGCTTGACCACGGCTTTGCCGGCTGCTTCGTCGACAGCCCCTGGCGCAGCGGTGGTGGCAGCAGCAGGTGCCTGGGCTTGCGGCGCGGCGGCTTTTTC < 1:187323/147‑1 GGCAGTGCTCAGCGAGTCGCTGTACACGGCGTAGACCATGTCGGTGTAATGCTTGACCACGGCTTTGCCGGCTACTTCGTCGACAGCCCCTGGCGCAGCGGTGGTGGCAGCAGCAGGTGCCTGGGCTTGCGGCGCGGCGGCTTTTTCGT > 5:169565/1‑149 GGCAGTGCTCAGCGAGTCGCTGTACACGGCGTAGACCATGTCGGTGTAATGCTTGACCACGGCGTTGCCGGCTGCTTCGTCGACAGCCCCTGGCGCAGCGGTGGTGGCAGCAGCAGGTGCCTGGGCTTGCGGCGCGGCGGCTTTTT < 2:315453/146‑1 GCAGTGCTCAGCGAGTCGCTGTACACGGCGTAGACCATGTCGGTGTAATGCTTGACCACGGCTTTGCCGGCTGCTTCGTCGACAGCCCCTGGCGCAGCGGTGGTGGCAGCAGCAGGTGCCTGGGCTTGCGGCGCGGCGGCTTTTTCGTC > 5:259719/1‑149 GCAGTGCTCAGCGAGTCGCTGTACACGGCGTAGACCATGTCGGTGTAATGCTTGACCACGGCTTTGCCGGCTGCTTCGTCGACAGCCCCTGGCGCAG < 7:328864/97‑1 GCAGTGCTCAGCGAGTCGCTGTACACGGCGTAGACCATGTCGGTGTAATGCTTGACCACGGCTTTGCCGGCTGCTTCGTCGACAGCCCCTGGCGCAG > 8:328864/1‑97 CAGTGCTCAGCGAGTCGCTGTACATGGCGTAGACCATGTCGGTGTAATGCTTGACCACGGCTTTGCCGGCTGCTTCGTCGACAGCCCCTGGCGCAGCGGTGGTGGCAGCAGCAGGTGCCTGGGCTTGCGGCGCGGCGGCTTTTTCGTCC < 3:192806/149‑1 CAGTGCTCAGCGAGTCGCTGTACACGGCGTAGACCATGTCGGTGTAATGCTTGACCACGGCTTTGCCGGCTGCTTCGTCGACAGCCCCTGGCGCAGCGGTGGTGGCAGCAGCAGGTGCCTGGGCTTGCGGCGCGGCGGCTTTTTCGTCC > 2:329664/1‑149 CAGTGCTCAGCGAGTCGCTGTACACGGCGTAGACCATGTCGGTGTAATGCTTGACCACGGCTTTGCCGGCTGCTTCGTCGACAGCCCCTGGCGCAGCGGTGGTGGCAGCAGCAGGTGCCTGGGCTTGCGGCGCGGCGGCTTTTTC < 7:68110/145‑1 CAGTGCTCAGCGAGTCGCTGTACACGGCGTAGACCATGTCGGTGTAATGCTTGACCACGGCTTTGCCGGCTGCTTCGTCGACAGCCCCTGGCGCAGCGGTGGTGGCAGCAGCAGGTGCCTGGGCTTGCGGCGCGGCGGCTTTTTC > 8:68110/1‑145 CTGCTGCCACCACCGCTGCGCCAGGGGCTGTCGACGAAGCAGCCGGCAAAGCCGTGGTCAAGCATTACACCGACATGGTCTACGCCGTGTACA‑GCGACTCGCTGAGCACTGCCAAGACGCTGCAGACCGCGGTCGATGCGTTCCTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1055719‑1055572‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcAGTGCTCAGCGAGTCGCTGTACACGGCGTAGACCATGTCGGTGTAATGCTTGACCACGGCTTTGCCGGCTGCTTCGTCGACAGCCCCTGGCGCAGCGGTGGTGGCAGCAGCAGGTGCCTGGGCTTGCGGCGCGGCGGCTTTTTCGTCC > NC_002947/1055610‑1055757 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |