| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1083135 = | 47 (0.720) | 3 (0.050) | 3/248 | NT | 6.2% | coding (2790/3822 nt) | PP_0938 | hypothetical protein |
| ? | NC_002947 | 1083175 = | 46 (0.750) | coding (2830/3822 nt) | PP_0938 | hypothetical protein | |||||
AGCGGCGCTGGCGGCAGGCAGCCGCAAGGTCTGCATGCGCACGACCACGGGCGCGCCCTTGGCATCCGGTACGCGCGCATTACCAATGACTTCCTTGCTGTCGAGGCGCAAATCCCAGGCCGGGCCGCCCCGGGCCAGGCGGACCACGGCCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1083288‑1083135‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcctggGATTTGCGCCTCGACAGCAAGGAAGTCATTGGTAATGCGCGCGTACCGGATGCCAAGGGCGCGCCCGTGGTCGTGCGCATGCAGACCT‑TGCGGCTGCCTGCCGCCAGCGCCGCTGAACAGCAGGCTGAAGACGGCCCCGACCCGCT > NC_002947/1083175‑1083320 AGCGGCGCTGGCGGCAGGCAGCCGCAAGGTCTGCATGCGCACGACCACGGGCGCGCCCTTGGCATCCGGTACGCGCGCATTACCAATGACTTCCTTGCTGTCGAGGCGCAAATCCCAGGCCGGGCCGCCCCGGGCCAGGCGGACCACG < 8:191915/148‑1 GCGGCGCTGGCGGCAGGCAGCCGCAAGGTCTGCATGCGCACGACCACGGGCGCGCCCTTGGCATCCGGTACGCGCGCATTACCAATGACTTCCTTGCTGTCGAGGCGCAAATCCCAGGCCGGGCCGCCCCGGGCCAGGCGGACCACGGC < 7:73024/149‑1 CGCTGGCGGCAGGCAGCCGCAAGGTCTGCATGCGCACGACCACGGGCGCGCCCTTGGCATCCGGTACGCGCGCATTACCAATGACTTCCTTGCTGTCGAGGCGCAAATCCCAGGCCGGGCCGCCCCGGGCCAGGCGGACCACGGCCTGG < 2:119845/149‑1 TGGCGGCAGGCAGCCGCAAGGTCTGCATGCGCACGACCACGGGCGCGCCCTTGGCATCCGGTACGCGCGCATTACCAATGACTTCCTTGCTGTCGAGGCGCAAATCCCAGGCCGGGCCGCCCCGGGCCAGGCGGACCACG < 7:49930/140‑1 TGGCGGCAGGCAGCCGCAAGGTCTGCATGCGCACGACCACGGGCGCGCCCTTGGCATCCGGTACGCGCGCATTACCAATGACTTCCTTGCTGTCGAGGCGCAAATCCCAGGCCGGGCCGCCCCGGGCCAGGCGGACCACG > 8:49930/1‑140 GACCACGGGCGCGCCCTTGGCATCCGGTACGCGCGCATTACCAATGACTTCCTTGCTGTCGAGGCGCAAATCCCAGGCCGGGCCGCCCCGGGCCAGGCGGACCACGGCCTGG < 4:48513/112‑1 AAATCCCAGGCCGGGCCGCCCCGGGCCAGGCGGACCACGGCCTGGGATTTGCGCCTCGACAGCAAGGAAGTCATTGGTAATGCGCGCGTACCGGATGCCAAGGGCGCGCCCGTGGTCGTGCGCATGCAGACCT‑TGCGGCTGCCTGCCGC > 5:184399/1‑149 CCAGGCCGGGCCGCCCCGGGCCAGGCGGACCACGGCCTGGGATTTGAGCCTCGACAGCAAGGAAGTCATTGGTAATGAGCGCGTACCGGATGCCAGGGGCGCGCCCGTGGTCGTGCGCATGAAGACAT‑TTCGGATGCCTGCCGCCAGCG > 8:258148/1‑149 CAGGCCGGGCCGCCCCGGGCCAGGCGGACCACGGCCTGGGATTTGCGCCTCGACAGCAAGGAAGTCATTGGTAATGCGCGCGTACCGGATGCCAAGGGCGCGCCCGTGGTCGTGCGCATGCAGACCT‑TGCGGCTGCCTGCCGCCAGCGC > 4:158412/1‑149 CGGCCTGGGATTTGCGCCTCGACAGCAAGGAAGTCATTGGTAATGCGCGCGTACCGGATGCCAAGGGCGCGCCCGTGGTCGTGCGCATGCAGACCTCTGCGGCTGCCTGCCGCCAGCGCCGCTGAACAGCAGGCTGAAGACGGCCCCGA < 1:310131/149‑1 TGGGATTTGCGCCTCGACAGCAAGGAAGTCATTGGTAATGCGCGCGTACCGGATGCCAAGGGCGCGCCCGTGGTCGTGCGCATGCAGACCT‑TGCGGCTGCCTGCCGCCAGCGCCGCTGAACAGCAGGCTGAAGACGGCCCCGACCCGCT > 3:6905/1‑149 AGCGGCGCTGGCGGCAGGCAGCCGCAAGGTCTGCATGCGCACGACCACGGGCGCGCCCTTGGCATCCGGTACGCGCGCATTACCAATGACTTCCTTGCTGTCGAGGCGCAAATCCCAGGCCGGGCCGCCCCGGGCCAGGCGGACCACGGCCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1083288‑1083135‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcctggGATTTGCGCCTCGACAGCAAGGAAGTCATTGGTAATGCGCGCGTACCGGATGCCAAGGGCGCGCCCGTGGTCGTGCGCATGCAGACCT‑TGCGGCTGCCTGCCGCCAGCGCCGCTGAACAGCAGGCTGAAGACGGCCCCGACCCGCT > NC_002947/1083175‑1083320 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |