| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1118321 = | 77 (1.180) | 5 (0.080) | 4/254 | NT | 6.3% | coding (394/429 nt) | holC | DNA polymerase III subunit chi |
| ? | NC_002947 | 1118359 = | 74 (1.180) | coding (356/429 nt) | holC | DNA polymerase III subunit chi | |||||
ACGCCGGCGAGCACCACGGTCTGCTGATCAACCTCGGCGCCAGCGTGCCGGGCTTTGTCGGGCAGTTCGAGCGGGTGGCCGAAATCGTTGTTGAAGAGCCGGCTATCCGCCAATCAGCCCGTGAGCGATTCCGTTTCTACCGCGAACAGGGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1118473‑1118321‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggctGATTGGCGGATAGCCGGCTCTTCAACAACGATTTCGGCCACCCGCTCGAACTGCCCGACAAAGCCCGGCACGCTGGCGCCGAGGTTGATCAGCAGACCGTGGTGCTCGCCGGCGTTGTCAGCCAGGCCCAGAACCACGTCAGCATC > NC_002947/1118359‑1118504 ACGCCGGCGAGCACCACGGTCTGCTGATCAACCTCGGCGCCAGCGTGCCGGGCTTTGTCGGGCAGTTCGAGCGGGTGGCCGAAATCGTTGTTGAAGAGCCGGCTATCCGCCAATCAGCCCGTGAGCGATTCCGTTTCTACCGCGAACAG < 7:357670/149‑1 GCCGGCGAGCACCACGGTCTGCTGATCAACCTCGGCGCCAGCGTGCCGGGCTTTGTCGGGCAGTTCGAGCGGGTGGCCGAAATCGTTGTTGAAGAGCCGGCTATCCGCCAATCAGCCCGTGAGCGATTCCGTTTCTACCGCGAACAGGG < 3:1793/149‑1 GCCGGCGAGCACCACGGTCTGCTGATCAACCTCGGCGCCAGCGTGCCGGGCTTTGTCGGGCAGTTCGAGCGGGTGGCCGAAATCGTTGTTGAAGAGCCGGCTATCCGCCAATCAGCCCGTGAGCGATTCCGTTTCTACCGCGAACAGGG > 4:274131/1‑149 CCGGCGAGCACCACGGTCTGCTGATCAACCTCGGCGCCAGCGTGCCGGGCTTTGTCGGGCAGTTCGAGCGGGTGGCCGAAATCGTTGTTGAAGAGCCGGCTATCCGCCAATCAGCCCGTGAGCGATTCCGTTTCTACCGCGAACAGGGC > 1:307894/1‑149 CGGCGAGCACCACGGTCTGCTGATCAACCTCGGCGCCAGCGTGCCGGGCTTTGTCGGGCAGTTCGAGCGGGTGGCCGAATTCGTTGTTGAAGAGCCGGCTATCCGCCAATCAGCCCGTGACCGATTCCGTTTCTACCGCGAACAGGGCT < 1:228550/149‑1 AGCCCGTGAGCGATTCCGTTTCTACCGCGAACAGGGCTGATTGGCGGATAGCCGGCTCTTCAACAACGATTTCGGCCACCCGCTCGAACTGCCCGACAAAGCCCGGCACGCTGGCGCCGAGGTTGATCAGCAGACCGTGGTGCTCGCCG > 1:89864/1‑149 AGCCCGTGAGCGATTCCGTTTCTACCGCGAACAGGGCTGATTGGCGGATAGCCGGCTCTTCAACAACGATTTCGGCCACCCGCTCGAACTGCCCGACAAAGCCCGGCACGCTGGCGCCGAGGTTGATCAGCAGACCGTGGTGCTCGCCG > 3:232235/1‑149 GCCCGTGAGCGATTCCGTTTCTACCGCGAACAGGGCTGATTGGCGGATAGCCGGCTCTTCAACAACGATTTCGGCCACCCGCTCGAACTGCCCGACAAAGCCCGGCACGCTGGCGCCGAGGTTGATCAGCAGACCGTGGTGCTCGCCGG > 2:51140/1‑149 CCGTGAGCGATTCCGTTTCTACCGCGAACAGGGCTGATTGGCGGATAGCCGGCTCTTCAACAACGATTTCGGCCACCCGCTCGAACTGCCCGACAAAGCCCGGCACGCTGGCGCCGAGGTTGATCAGCA < 1:17586/129‑1 CCGTGAGCGATTCCGTTTCTACCGCGAACAGGGCTGATTGGCGGATAGCCGGCTCTTCAACAACGATTTCGGCCACCCGCTCGAACTGCCCGACAAAGCCCGGCACGCTGGCGCCGAGGTTGATCAGCA > 2:17586/1‑129 GCTGATTGGCGGATAGCCGGCTCTTCAACAACGATTTCGGCCACCCGCTCGAACTGCCCGACAAAGCCCGGCACGCTGGCGCCGAGGTTGATCAGCAGACCGTGGTGCTCGCCGGCGTTGTCAGCCAGGCCCAGAACCACGTCAGCATC < 8:307121/149‑1 ACGCCGGCGAGCACCACGGTCTGCTGATCAACCTCGGCGCCAGCGTGCCGGGCTTTGTCGGGCAGTTCGAGCGGGTGGCCGAAATCGTTGTTGAAGAGCCGGCTATCCGCCAATCAGCCCGTGAGCGATTCCGTTTCTACCGCGAACAGGGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1118473‑1118321‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggctGATTGGCGGATAGCCGGCTCTTCAACAACGATTTCGGCCACCCGCTCGAACTGCCCGACAAAGCCCGGCACGCTGGCGCCGAGGTTGATCAGCAGACCGTGGTGCTCGCCGGCGTTGTCAGCCAGGCCCAGAACCACGTCAGCATC > NC_002947/1118359‑1118504 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |