| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1141102 = | 62 (0.950) | 3 (0.050) | 3/254 | NT | 5.1% | coding (1327/1428 nt) | arcD‑I | arginine/ornithine antiporter |
| ? | NC_002947 | 1141161 = | 51 (0.810) | coding (1268/1428 nt) | arcD‑I | arginine/ornithine antiporter | |||||
TCTCTGCCCTGCTCTACGCACCTGGCGCCATCCTGTTCGCCAAGGCCAAGCGTGAGGTGGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1141164‑1141102‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcaGAGAGCAGCAGGTATTTCACGCCGCCGGCGTACAGCAGCCAGATGGCGTACAACAGGGCGATGCCACCGATGATCAGGTCCTTCTTGCGTTCGGCCAGGGCTTGTTCGTAGGTTTCGCTGCGCAGTGCCAGCAGGAACGCATAGGCTG > NC_002947/1141161‑1141308 TCTCTGCCCTGCTCTACGCACCTGGCGCCATCCTGTTCGCCAAGGCCAAGCGTGAGGTGGGCAGAGAGCAGCAGGTATTTCACGCCGCCGGCGTACAGCAGCCAGATGGCGTACAACAGGGCGATGCCACCGATGATCAGGTCCTTCTT > 4:142353/1‑149 CTCTGCCCTGCTCTACGCACCTGGCGCCATCCTGTTCGCCAAGGCCAAGCGTGAGGTGGGCAGAGAGCAGCAGGTATTTCACGCCGCCGGCGTACAGCAGCCAGATGGCGTACAACAGGGCGATGCCACCGATGATCAGGTCCTTCTTG > 7:41592/1‑149 CGCCATCCTGTTCGCCAAGGCCAAGCGTGAGGTGGGCAGAGAGCAGCAGGTATTTCACGCCGCCGGCGTACAGCAGCCAGATGGCGTACAACAGGGCGATGCCACCGATGATCAGGTCCTTCTTGCGTTCGGCCAGGGCTTGTTCGTAG < 3:142353/149‑1 GGGCAGAGAGCAGCAGGTATTTCACGCCGCCGGCGTACAGCAGCCAGATGGCGTACAACAGGGCGATGCCACCGATGATCAGGTCCTTCTTGCGTTCGGCCAGGGCTTGTTCGTAGGTTTCGCTGCGCAGTGCCAGCAGGAACGCATAG < 8:131593/149‑1 GGCAGAGAGCAGCAGGTATTTCACGCCGCCGGCGTACAGCAGCCAGATGGCGTACAACAGGGCGATGCCACCGATGATCAGGTCCTTCTTGCGTTCGGCCAGGGCTTGTTCGTAGGTTTCGCTGCGCAGT < 3:390365/130‑1 GGCAGAGAGCAGCAGGTATTTCACGCCGCCGGCGTACAGCAGCCAGATGGCGTACAACAGGGCGATGCCACCGATGATCAGGTCCTTCTTGCGTTCGGCCAGGGCTTGTTCGTAGGTTTCGCTGCGCAGT < 3:396761/130‑1 GGCAGAGAGCAGCAGGTATTTCACGCCGCCGGCGTACAGCAGCCAGATGGCGTACAACAGGGCGATGCCACCGATGATCAGGTCCTTCTTGCGTTCGGCCAGGGCTTGTTCGTAGGTTTCGCTGCGCAGT > 4:390365/1‑130 GGCAGAGAGCAGCAGGTATTTCACGCCGCCGGCGTACAGCAGCCAGATGGCGTACAACAGGGCGATGCCACCGATGATCAGGTCCTTCTTGCGTTCGGCCAGGGCTTGTTCGTAGGTTTCGCTGCGCAGT > 4:396761/1‑130 CAGAGAGCAGCAGGTATTTCACGCCGCCGGCGTACAGCAGCCAGATGGCGTACAACAGGGCGATGCCACCGATGATCAGGTCCTTCTTGCGTTCGGCCAGGGCTTGTTCGTAGGTTTCGCTGCGCAGTGCCAGCAGGAACGCATAGGCT > 5:181613/1‑149 AGAGAGCAGCAGGTATTTCACGCCGCCGGCGTGCAGCAGCCAGATGGCGTACAACAGGGCGATGCCACCGATGATCAGGTCCTTCTTGCGTTCGGCCAGGGCTTGTTCGTAGGTTTCGCTGCGCAGTGCCAGCAGGAACGCATAGGCTG < 4:225258/149‑1 TCTCTGCCCTGCTCTACGCACCTGGCGCCATCCTGTTCGCCAAGGCCAAGCGTGAGGTGGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1141164‑1141102‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcaGAGAGCAGCAGGTATTTCACGCCGCCGGCGTACAGCAGCCAGATGGCGTACAACAGGGCGATGCCACCGATGATCAGGTCCTTCTTGCGTTCGGCCAGGGCTTGTTCGTAGGTTTCGCTGCGCAGTGCCAGCAGGAACGCATAGGCTG > NC_002947/1141161‑1141308 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |