New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1216282	54 (0.830)	5 (0.080)	5/244	NT	8.4%	coding (677/4305 nt)	PP_1061	ATP‑dependent DNA helicase
	?	NC_002947	= 1216314	59 (0.980)					coding (645/4305 nt)	PP_1061	ATP‑dependent DNA helicase

CGGTGTTCACGGGCAAGGGTGGCCAAGCGGTCATACACCAGGCCCCAGACATCAATGGCCATCACCGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCAGGGACGCCCGCTACCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1216126‑1216282 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgctacccaACGCCCGGTCGAACGGGTGGCACAGTTTCTGGTGGGTAGCGGGCGTCCCTGCGCCATTGTCGATATCGGCCATGCCCGCAAGCGTGACCTGGCCATCGAAGTGCCGCCGGTACCGCTGGGGGCGGTGATGGCCATTGATGTCTGGGGC  <  NC_002947/1216314‑1216167                                                                                                                                                                                                                                                                                                                   CGGTGTTCACGGGCAAGGGTGGCCAAGCGGTCATACACCAGGCCCCAGACATCAATGGCCATCACCGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCAGGGACGCCC                                                                                                                                                              <  4:147278/149‑1     GTTCACGGGCAAGGGTGGCCAAGCGGTCATACACCAGGCCCCAGACATCAATGGCCATCACCGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCAGGGACGCCCGC                                                                                                                                                            <  8:229341/147‑1     GTTCACGGGCAAGGGTGGCCAAGCGGTCATACACCAGGCCCCAGACATCAATGGCCATCACCGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCAGGGACGCCCGC                                                                                                                                                            >  7:229341/1‑147         ACGGGCAAGGGTGGCCAAGCGGTCATACACCAGGCCCCAGACATCAATGGCCATCACCGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCAGGGACGCCCGCTACCCA                                                                                                                                                      >  3:311470/1‑149                                            CCCAGACATCAATGGCCATCACCGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCAGGGACGCCCGCTACCCAACGCCCGGTCGAACGGGTGGCACAGTTTCTGGTGG                                                                                                                   >  4:68735/1‑149                                                  CATCAATGGCCATCACCGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCAGGGACGCCCGCTACCCAACGCCCGGTCGAACGGGTGGCACAGTTTCTGGTGGGTAGC                                                                                                              <  4:51182/148‑1                                                   ATCAATGGCCATCACCGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCAGGGACGCCCGCTACCCAACGCCCGGTCGAACGGGTGGCACAGTTTCTGGTGGGTAGCGG                                                                                                            >  4:122264/1‑149                                                   ATCAATGGCCATCACCGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCAGGGACGCCCGCTACCCAACGCCCGGTCGAACGGGTGGCACAGTTTCTGGTGGGTAGCGG                                                                                                            <  3:122264/149‑1                                                      AATGGCCATCACCGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCAGGGACGCCCGCTACCCAACGCCCGGTCGAACGGGTGGCACAGTTTCTGGTGGGTAGCGGGC                                                                                                          <  3:68735/148‑1                                                                                                                                                     CGCTACCCAACGCCCGGTCGAACGGGTGGCACAGTTTCTGGTGGGTAGCGGGCGTCCCTGCGCCATTGTCGATATCGGCCATGCCCGCAAGCGTGACCTGGCCATCGAAGTGCCGCCGGTACCGCTGGGGGCGGTG                       >  3:86104/1‑136                                                                                                                                                     CGCTACCCAACGCCCGGTCGAACGGGTGGCACAGTTTCTGGTGGGTAGCGGGCGTCCCTGCGCCATTGTCGATATCGGCCATGCCCGCAAGCGTGACCTGGCCATCGAAGTGCCGCCGGTACCGCTGGGGGCGGTG                       <  4:86104/136‑1                                                                                                                                                      GCTACCCAACGCCCGGTCGAACGGGTGGCACAGTTTCTGGTGGGTAGCGGGCGTCCCTGCGCCATTGTCGATATCGGCCATGCCCGCAAGCGTGACCTGGCCATCGAAGTGCCGCCGGTACCGCTGGGGGCGGTGATGGCCATTGATGT         >  3:197572/1‑149                                                                                                                                                      GCTACCCAACGCCCGGTCGAACGGGTGGCACAGTTTCTGGTGGGTAGCGGGCGTCCCTGCGCCATTGTCGATATCGGCCATGCCCGCAAGCGTGACCTGGCAATCGAAGTGCCGCCGGTACCGCTGGGGGCGGTGATGGCCATTGATGT         >  5:212907/1‑149                                                                                                                                                          CCCAACGCCCGGTCGAACGGGTGGCACAGTTTCTGGTGGGTAGCGGGCGTCCCTGCGCCATTGTCGATATCGGCCATGCCCGCAAGCGTGACCTGGCCATCGAAGTGCCGCCGGTACCGCTGGGGGCGGTGATGGCCATTGATGTCTG      <  8:119637/148‑1                                                                                                                                                            CAACGCCCGGTCGAACGGGTGGCACAGTTTCTGGTGGGTAGCGGGCGTCCCTGCGCCATTGT                                                                                          <  5:394422/62‑1                                                                                                                                                            CAACGCCCGGTCGAACGGGTGGCACAGTTTCTGGTGGGTAGCGGGCGTCCCTGCGCCATTGT                                                                                          >  6:394422/1‑62                                                                                                                                                             AACGCCCGGTCGAACGGGTGGCACAGTTTCTGGTGGGTAGCGGGCGTCCCTGCGCCATTGTCGATATCGGCCATGCCCGCAAGCGTGACCTGGCCATCGAAGTGCCGCCGGTACCGCTGGGGGCGGTGATGGCCATTGATGTCTGGGGC  >  1:353754/1‑149                                                                                                                                                                                                                                                                                                                   CGGTGTTCACGGGCAAGGGTGGCCAAGCGGTCATACACCAGGCCCCAGACATCAATGGCCATCACCGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCAGGGACGCCCGCTACCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1216126‑1216282 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgctacccaACGCCCGGTCGAACGGGTGGCACAGTTTCTGGTGGGTAGCGGGCGTCCCTGCGCCATTGTCGATATCGGCCATGCCCGCAAGCGTGACCTGGCCATCGAAGTGCCGCCGGTACCGCTGGGGGCGGTGATGGCCATTGATGTCTGGGGC  <  NC_002947/1216314‑1216167

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.